RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 CHCHD4Q8N4Q1 142 aa12.68□□□□□ -0.38
VPS16-208ENST00000487461 DQX1Q8TE96 717 aaKnown RBP12.68□□□□□ -0.38
VPS16-208ENST00000487461 FCRL2Q96LA5 508 aaPredicted RBP12.68□□□□□ -0.38
VPS16-208ENST00000487461 SRRTQ9BXP5 876 aaKnown RBP12.68□□□□□ -0.38
VPS16-208ENST00000487461 IRX2Q9BZI1 471 aaPredicted RBP12.68□□□□□ -0.38
VPS16-208ENST00000487461 ZDHHC5Q9C0B5 715 aa12.68□□□□□ -0.38
VPS16-208ENST00000487461 LHX5Q9H2C1 402 aa12.68□□□□□ -0.38
VPS16-208ENST00000487461 C6orf106Q9H6K1 298 aaPredicted RBP12.68□□□□□ -0.38
VPS16-208ENST00000487461 IL21RQ9HBE5 538 aa12.68□□□□□ -0.38
VPS16-208ENST00000487461 EIF2B4Q9UI10 523 aaKnown RBP12.68□□□□□ -0.38
VPS16-208ENST00000487461 KLK13Q9UKR3 277 aa12.68□□□□□ -0.38
VPS16-208ENST00000487461 CTNND2Q9UQB3 1225 aa12.68□□□□□ -0.38
VPS16-208ENST00000487461 SLCO1B1Q9Y6L6 691 aa12.68□□□□□ -0.38
VPS16-208ENST00000487461 KNL1Q8NG31 2342 aa12.68□□□□□ -0.38
VPS16-208ENST00000487461 CKAP5Q14008 2032 aa12.67□□□□□ -0.38
VPS16-208ENST00000487461 NUMA1Q14980 2115 aa12.67□□□□□ -0.38
VPS16-208ENST00000487461 BICDL2A1A5D9 508 aa12.67□□□□□ -0.38
VPS16-208ENST00000487461 IRAK2O43187 625 aa12.67□□□□□ -0.38
VPS16-208ENST00000487461 GNA14O95837 355 aa12.67□□□□□ -0.38
VPS16-208ENST00000487461 AFPP02771 609 aaKnown RBP12.67□□□□□ -0.38
VPS16-208ENST00000487461 ATP5BP06576 529 aaKnown RBP12.67□□□□□ -0.38
VPS16-208ENST00000487461 POLR2EP19388 210 aaKnown RBP12.67□□□□□ -0.38
VPS16-208ENST00000487461 MARSP56192 900 aaKnown RBP12.67□□□□□ -0.38
VPS16-208ENST00000487461 HNRNPDQ14103 355 aaKnown RBP12.67□□□□□ -0.38
VPS16-208ENST00000487461 SYPL2Q5VXT5 272 aa12.67□□□□□ -0.38
VPS16-208ENST00000487461 FIBINQ8TAL6 211 aa12.67□□□□□ -0.38
VPS16-208ENST00000487461 ADAM32Q8TC27 787 aa12.67□□□□□ -0.38
VPS16-208ENST00000487461 GOLGA1Q92805 767 aa12.67□□□□□ -0.38
VPS16-208ENST00000487461 TTC17Q96AE7 1141 aa12.67□□□□□ -0.38
VPS16-208ENST00000487461 SLC39A13Q96H72 371 aa12.67□□□□□ -0.38
VPS16-208ENST00000487461 SLC4A5Q9BY07 1137 aa12.67□□□□□ -0.38
VPS16-208ENST00000487461 INTS2Q9H0H0 1204 aaKnown RBP12.67□□□□□ -0.38
VPS16-208ENST00000487461 MTG2Q9H4K7 406 aa12.67□□□□□ -0.38
VPS16-208ENST00000487461 UBE2TQ9NPD8 197 aaPredicted RBP12.67□□□□□ -0.38
VPS16-208ENST00000487461 SUN2Q9UH99 717 aa12.67□□□□□ -0.38
VPS16-208ENST00000487461 INTS6Q9UL03 887 aaKnown RBP12.67□□□□□ -0.38
VPS16-208ENST00000487461 MSRB2Q9Y3D2 182 aa12.67□□□□□ -0.38
VPS16-208ENST00000487461 NEUROG3Q9Y4Z2 214 aa12.67□□□□□ -0.38
VPS16-208ENST00000487461 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.67□□□□□ -0.38
VPS16-208ENST00000487461 KRT5P13647 590 aa12.66□□□□□ -0.38
VPS16-208ENST00000487461 CSNK1EP49674 416 aaKnown RBP12.66□□□□□ -0.38
VPS16-208ENST00000487461 RPS24P62847 133 aaKnown RBP12.66□□□□□ -0.38
VPS16-208ENST00000487461 PAK1Q13153 545 aa12.66□□□□□ -0.38
VPS16-208ENST00000487461 HLA-BQ31612 363 aa12.66□□□□□ -0.38
VPS16-208ENST00000487461 NAXDQ8IW45 347 aa12.66□□□□□ -0.38
VPS16-208ENST00000487461 MFN1Q8IWA4 741 aa12.66□□□□□ -0.38
VPS16-208ENST00000487461 CFAP52Q8N1V2 620 aa12.66□□□□□ -0.38
VPS16-208ENST00000487461 ZNF606Q8WXB4 792 aa12.66□□□□□ -0.38
VPS16-208ENST00000487461 MYO19Q96H55 970 aa12.66□□□□□ -0.38
VPS16-208ENST00000487461 PRICKLE1Q96MT3 831 aaPredicted RBP12.66□□□□□ -0.38
VPS16-208ENST00000487461 SERPINB11Q96P15 392 aa12.66□□□□□ -0.38
VPS16-208ENST00000487461 DDX50Q9BQ39 737 aaKnown RBP12.66□□□□□ -0.38
VPS16-208ENST00000487461 NUCKS1Q9H1E3 243 aaKnown RBP12.66□□□□□ -0.38
VPS16-208ENST00000487461 PCED1AQ9H1Q7 454 aa12.66□□□□□ -0.38
VPS16-208ENST00000487461 GAREM1Q9H706 876 aa12.66□□□□□ -0.38
VPS16-208ENST00000487461 ACP6Q9NPH0 428 aa12.66□□□□□ -0.38
VPS16-208ENST00000487461 ST7Q9NRC1 585 aa12.66□□□□□ -0.38
VPS16-208ENST00000487461 CYTH4Q9UIA0 394 aa12.66□□□□□ -0.38
VPS16-208ENST00000487461 XPO7Q9UIA9 1087 aaKnown RBP12.66□□□□□ -0.38
VPS16-208ENST00000487461 RALYQ9UKM9 306 aaKnown RBP12.66□□□□□ -0.38
VPS16-208ENST00000487461 TLR6Q9Y2C9 796 aa12.66□□□□□ -0.38
VPS16-208ENST00000487461 PCDHB9Q9Y5E1 797 aa12.66□□□□□ -0.38
VPS16-208ENST00000487461 IGF2RP11717 2491 aa12.66□□□□□ -0.38
VPS16-208ENST00000487461 CACNA1GO43497 2377 aa12.65□□□□□ -0.38
VPS16-208ENST00000487461 A0A1B0GVT2 93 aa12.65□□□□□ -0.38
VPS16-208ENST00000487461 FAM221BA6H8Z2 402 aa12.65□□□□□ -0.38
VPS16-208ENST00000487461 H0Y626 953 aa12.65□□□□□ -0.38
VPS16-208ENST00000487461 PAPSS1O43252 624 aaPredicted RBP12.65□□□□□ -0.38
VPS16-208ENST00000487461 CBFA2T3O75081 653 aa12.65□□□□□ -0.38
VPS16-208ENST00000487461 LETM1O95202 739 aaPredicted RBP12.65□□□□□ -0.38
VPS16-208ENST00000487461 TRIM16O95361 564 aa12.65□□□□□ -0.38
VPS16-208ENST00000487461 RDXP35241 583 aaKnown RBP12.65□□□□□ -0.38
VPS16-208ENST00000487461 CSKP41240 450 aa12.65□□□□□ -0.38
VPS16-208ENST00000487461 ACADSBP45954 432 aa12.65□□□□□ -0.38
VPS16-208ENST00000487461 ZBTB16Q05516 673 aa12.65□□□□□ -0.38
VPS16-208ENST00000487461 ZNF423Q2M1K9 1284 aa12.65□□□□□ -0.38
VPS16-208ENST00000487461 DCAF6Q58WW2 860 aa12.65□□□□□ -0.38
VPS16-208ENST00000487461 FSCBQ5H9T9 825 aa12.65□□□□□ -0.38
VPS16-208ENST00000487461 MS4A13Q5J8X5 152 aa12.65□□□□□ -0.38
VPS16-208ENST00000487461 GJB7Q6PEY0 223 aa12.65□□□□□ -0.38
VPS16-208ENST00000487461 MMS22LQ6ZRQ5 1243 aa12.65□□□□□ -0.38
VPS16-208ENST00000487461 BEND5Q7L4P6 421 aa12.65□□□□□ -0.38
VPS16-208ENST00000487461 RAB44Q7Z6P3 723 aaPredicted RBP12.65□□□□□ -0.38
VPS16-208ENST00000487461 TMEM110Q86TL2 294 aa12.65□□□□□ -0.38
VPS16-208ENST00000487461 TAC4Q86UU9 113 aa12.65□□□□□ -0.38
VPS16-208ENST00000487461 CARNMT1Q8N4J0 409 aa12.65□□□□□ -0.38
VPS16-208ENST00000487461 PNPLA1Q8N8W4 532 aa12.65□□□□□ -0.38
VPS16-208ENST00000487461 HJURPQ8NCD3 748 aaPredicted RBP12.65□□□□□ -0.38
VPS16-208ENST00000487461 STK32AQ8WU08 396 aa12.65□□□□□ -0.38
VPS16-208ENST00000487461 SNX19Q92543 992 aa12.65□□□□□ -0.38
VPS16-208ENST00000487461 FAM149B1Q96BN6 582 aa12.65□□□□□ -0.38
VPS16-208ENST00000487461 MRGPRX3Q96LB0 322 aa12.65□□□□□ -0.38
VPS16-208ENST00000487461 BTBD1Q9H0C5 482 aa12.65□□□□□ -0.38
VPS16-208ENST00000487461 FBRSQ9HAH7 460 aa12.65□□□□□ -0.38
VPS16-208ENST00000487461 PCOLCE2Q9UKZ9 415 aa12.65□□□□□ -0.38
VPS16-208ENST00000487461 FNDC3AQ9Y2H6 1198 aaKnown RBP12.65□□□□□ -0.38
VPS16-208ENST00000487461 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.65□□□□□ -0.38
VPS16-208ENST00000487461 CHD6Q8TD26 2715 aa12.65□□□□□ -0.38
VPS16-208ENST00000487461 TMEM8BA6NDV4 472 aa12.64□□□□□ -0.39
VPS16-208ENST00000487461 SART1O43290 800 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms