RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 AGFG2O95081 481 aa12.23□□□□□ -0.45
TRIM56-204ENST00000487252 LIPCP11150 499 aa12.23□□□□□ -0.45
TRIM56-204ENST00000487252 PTPN1P18031 435 aaKnown RBP12.23□□□□□ -0.45
TRIM56-204ENST00000487252 GRNP28799 593 aaKnown RBP12.23□□□□□ -0.45
TRIM56-204ENST00000487252 CHKAP35790 457 aa12.23□□□□□ -0.45
TRIM56-204ENST00000487252 ATP5C1P36542 298 aaKnown RBP12.23□□□□□ -0.45
TRIM56-204ENST00000487252 PKP1Q13835 747 aa12.23□□□□□ -0.45
TRIM56-204ENST00000487252 HS1BP3Q53T59 392 aa12.23□□□□□ -0.45
TRIM56-204ENST00000487252 RBM44Q6ZP01 1051 aaKnown RBP12.23□□□□□ -0.45
TRIM56-204ENST00000487252 KIAA0907Q7Z7F0 614 aaPredicted RBP12.23□□□□□ -0.45
TRIM56-204ENST00000487252 CACTINQ8WUQ7 758 aaKnown RBP12.23□□□□□ -0.45
TRIM56-204ENST00000487252 OSER1Q9NX31 292 aa12.23□□□□□ -0.45
TRIM56-204ENST00000487252 ODF2LQ9ULJ1 636 aa12.23□□□□□ -0.45
TRIM56-204ENST00000487252 TDRD6O60522 2096 aaKnown RBP12.23□□□□□ -0.45
TRIM56-204ENST00000487252 DOCK9Q9BZ29 2069 aa12.23□□□□□ -0.45
TRIM56-204ENST00000487252 RP1L1Q8IWN7 2480 aaPredicted RBP12.22□□□□□ -0.45
TRIM56-204ENST00000487252 PP2D1A8MPX8 630 aa12.22□□□□□ -0.45
TRIM56-204ENST00000487252 K7ENM7 598 aa12.22□□□□□ -0.45
TRIM56-204ENST00000487252 FFAR2O15552 330 aa12.22□□□□□ -0.45
TRIM56-204ENST00000487252 STC2O76061 302 aa12.22□□□□□ -0.45
TRIM56-204ENST00000487252 PLA2G4AP47712 749 aa12.22□□□□□ -0.45
TRIM56-204ENST00000487252 POLE2P56282 527 aa12.22□□□□□ -0.45
TRIM56-204ENST00000487252 KLHL40Q2TBA0 621 aa12.22□□□□□ -0.45
TRIM56-204ENST00000487252 FNDC3BQ53EP0 1204 aaKnown RBP12.22□□□□□ -0.45
TRIM56-204ENST00000487252 HYIQ5T013 277 aa12.22□□□□□ -0.45
TRIM56-204ENST00000487252 PAQR9Q6ZVX9 377 aa12.22□□□□□ -0.45
TRIM56-204ENST00000487252 RSRC2Q7L4I2 434 aaKnown RBP12.22□□□□□ -0.45
TRIM56-204ENST00000487252 ADIPOR2Q86V24 386 aa12.22□□□□□ -0.45
TRIM56-204ENST00000487252 ATCAYQ86WG3 371 aa12.22□□□□□ -0.45
TRIM56-204ENST00000487252 BRSK2Q8IWQ3 736 aa12.22□□□□□ -0.45
TRIM56-204ENST00000487252 ZC3H3Q8IXZ2 948 aaKnown RBP12.22□□□□□ -0.45
TRIM56-204ENST00000487252 KCTD17Q8N5Z5 321 aa12.22□□□□□ -0.45
TRIM56-204ENST00000487252 ZSCAN1Q8NBB4 408 aa12.22□□□□□ -0.45
TRIM56-204ENST00000487252 TPCN2Q8NHX9 752 aa12.22□□□□□ -0.45
TRIM56-204ENST00000487252 CYB5D2Q8WUJ1 264 aa12.22□□□□□ -0.45
TRIM56-204ENST00000487252 ZSCAN31Q96LW9 406 aaPredicted RBP12.22□□□□□ -0.45
TRIM56-204ENST00000487252 LMBRD1Q9NUN5 540 aa12.22□□□□□ -0.45
TRIM56-204ENST00000487252 PLA2G4CQ9UP65 541 aa12.22□□□□□ -0.45
TRIM56-204ENST00000487252 LIMCH1Q9UPQ0 1083 aa12.22□□□□□ -0.45
TRIM56-204ENST00000487252 ZNF510Q9Y2H8 683 aa12.22□□□□□ -0.45
TRIM56-204ENST00000487252 CSMD2Q7Z408 3487 aa12.21□□□□□ -0.45
TRIM56-204ENST00000487252 A0A1W2PP55 124 aa12.21□□□□□ -0.45
TRIM56-204ENST00000487252 PFKFB2O60825 505 aa12.21□□□□□ -0.45
TRIM56-204ENST00000487252 TACC1O75410 805 aa12.21□□□□□ -0.45
TRIM56-204ENST00000487252 PIAS2O75928 621 aa12.21□□□□□ -0.45
TRIM56-204ENST00000487252 KRT19P08727 400 aa12.21□□□□□ -0.45
TRIM56-204ENST00000487252 FAM163BP0C2L3 166 aa12.21□□□□□ -0.45
TRIM56-204ENST00000487252 COL8A1P27658 744 aa12.21□□□□□ -0.45
TRIM56-204ENST00000487252 HLA-FP30511 346 aa12.21□□□□□ -0.45
TRIM56-204ENST00000487252 ABCD1P33897 745 aa12.21□□□□□ -0.45
TRIM56-204ENST00000487252 GNL1P36915 607 aaPredicted RBP12.21□□□□□ -0.45
TRIM56-204ENST00000487252 ARID5AQ03989 594 aa12.21□□□□□ -0.45
TRIM56-204ENST00000487252 SFSWAPQ12872 951 aaKnown RBP12.21□□□□□ -0.45
TRIM56-204ENST00000487252 KRT79Q5XKE5 535 aa12.21□□□□□ -0.45
TRIM56-204ENST00000487252 BORAQ6PGQ7 559 aa12.21□□□□□ -0.45
TRIM56-204ENST00000487252 FOXR1Q6PIV2 292 aa12.21□□□□□ -0.45
TRIM56-204ENST00000487252 DTX1Q86Y01 620 aa12.21□□□□□ -0.45
TRIM56-204ENST00000487252 CPXM2Q8N436 756 aa12.21□□□□□ -0.45
TRIM56-204ENST00000487252 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.21□□□□□ -0.45
TRIM56-204ENST00000487252 ARRDC3Q96B67 414 aa12.21□□□□□ -0.45
TRIM56-204ENST00000487252 MYO19Q96H55 970 aa12.21□□□□□ -0.45
TRIM56-204ENST00000487252 HPDLQ96IR7 371 aa12.21□□□□□ -0.45
TRIM56-204ENST00000487252 MRPL45Q9BRJ2 306 aaKnown RBP12.21□□□□□ -0.45
TRIM56-204ENST00000487252 SLC12A9Q9BXP2 914 aa12.21□□□□□ -0.45
TRIM56-204ENST00000487252 DPEP3Q9H4B8 488 aa12.21□□□□□ -0.45
TRIM56-204ENST00000487252 TLR8Q9NR97 1041 aaKnown RBP12.21□□□□□ -0.45
TRIM56-204ENST00000487252 KLHL11Q9NVR0 708 aa12.21□□□□□ -0.45
TRIM56-204ENST00000487252 CUEDC1Q9NWM3 386 aaPredicted RBP12.21□□□□□ -0.45
TRIM56-204ENST00000487252 GOLGA6L3A6NEY3 463 aa12.2□□□□□ -0.46
TRIM56-204ENST00000487252 WIPF3A6NGB9 483 aa12.2□□□□□ -0.46
TRIM56-204ENST00000487252 RIOK3O14730 519 aaKnown RBP12.2□□□□□ -0.46
TRIM56-204ENST00000487252 PLD2O14939 933 aa12.2□□□□□ -0.46
TRIM56-204ENST00000487252 SCAMP1O15126 338 aa12.2□□□□□ -0.46
TRIM56-204ENST00000487252 NVLO15381 856 aaKnown RBP12.2□□□□□ -0.46
TRIM56-204ENST00000487252 NUDT1P36639 197 aa12.2□□□□□ -0.46
TRIM56-204ENST00000487252 ADPRHP54922 357 aa12.2□□□□□ -0.46
TRIM56-204ENST00000487252 PPP2CBP62714 309 aa12.2□□□□□ -0.46
TRIM56-204ENST00000487252 PPP2CAP67775 309 aa12.2□□□□□ -0.46
TRIM56-204ENST00000487252 CST6Q15828 149 aa12.2□□□□□ -0.46
TRIM56-204ENST00000487252 MANEAQ5SRI9 462 aa12.2□□□□□ -0.46
TRIM56-204ENST00000487252 FHL5Q5TD97 284 aa12.2□□□□□ -0.46
TRIM56-204ENST00000487252 C1QL3Q5VWW1 255 aa12.2□□□□□ -0.46
TRIM56-204ENST00000487252 FAM217AQ8IXS0 508 aa12.2□□□□□ -0.46
TRIM56-204ENST00000487252 SRRM1Q8IYB3 904 aaKnown RBP12.2□□□□□ -0.46
TRIM56-204ENST00000487252 ZNF276Q8N554 614 aa12.2□□□□□ -0.46
TRIM56-204ENST00000487252 ZSWIM2Q8NEG5 633 aa12.2□□□□□ -0.46
TRIM56-204ENST00000487252 OR6B3Q8NGW1 331 aa12.2□□□□□ -0.46
TRIM56-204ENST00000487252 FAM131CQ96AQ9 280 aa12.2□□□□□ -0.46
TRIM56-204ENST00000487252 REEP2Q9BRK0 252 aa12.2□□□□□ -0.46
TRIM56-204ENST00000487252 DUSP23Q9BVJ7 150 aa12.2□□□□□ -0.46
TRIM56-204ENST00000487252 RAB34Q9BZG1 259 aa12.2□□□□□ -0.46
TRIM56-204ENST00000487252 MTMR12Q9C0I1 747 aa12.2□□□□□ -0.46
TRIM56-204ENST00000487252 IKZF4Q9H2S9 585 aa12.2□□□□□ -0.46
TRIM56-204ENST00000487252 ST6GALNAC4Q9H4F1 302 aa12.2□□□□□ -0.46
TRIM56-204ENST00000487252 DMAP1Q9NPF5 467 aaPredicted RBP12.2□□□□□ -0.46
TRIM56-204ENST00000487252 PDRG1Q9NUG6 133 aa12.2□□□□□ -0.46
TRIM56-204ENST00000487252 EVA1BQ9NVM1 165 aa12.2□□□□□ -0.46
TRIM56-204ENST00000487252 SUN2Q9UH99 717 aa12.2□□□□□ -0.46
TRIM56-204ENST00000487252 DMTF1Q9Y222 760 aa12.2□□□□□ -0.46
TRIM56-204ENST00000487252 CYP46A1Q9Y6A2 500 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms