RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 XYLBO75191 536 aa13.67□□□□□ -0.22
HDLBP-241ENST00000487169 HSPA1AP0DMV8 641 aaKnown RBP13.67□□□□□ -0.22
HDLBP-241ENST00000487169 HSPA1BP0DMV9 641 aaKnown RBP13.67□□□□□ -0.22
HDLBP-241ENST00000487169 GPC1P35052 558 aa13.67□□□□□ -0.22
HDLBP-241ENST00000487169 CDC16Q13042 620 aa13.67□□□□□ -0.22
HDLBP-241ENST00000487169 MTA1Q13330 715 aa13.67□□□□□ -0.22
HDLBP-241ENST00000487169 PCBP1Q15365 356 aaKnown RBP eCLIP13.67□□□□□ -0.221e-6■■■□□ 16.1
HDLBP-241ENST00000487169 FAM110CQ1W6H9 321 aa13.67□□□□□ -0.22
HDLBP-241ENST00000487169 NOMO2Q5JPE7 1267 aa13.67□□□□□ -0.22
HDLBP-241ENST00000487169 AADACL2Q6P093 401 aa13.67□□□□□ -0.22
HDLBP-241ENST00000487169 ERAP2Q6P179 960 aa13.67□□□□□ -0.22
HDLBP-241ENST00000487169 ANKRD52Q8NB46 1076 aa13.67□□□□□ -0.22
HDLBP-241ENST00000487169 SPATA20Q8TB22 786 aa13.67□□□□□ -0.22
HDLBP-241ENST00000487169 LENG9Q96B70 501 aa13.67□□□□□ -0.22
HDLBP-241ENST00000487169 PLEKHA8Q96JA3 519 aa13.67□□□□□ -0.22
HDLBP-241ENST00000487169 ELOVL6Q9H5J4 265 aa13.67□□□□□ -0.22
HDLBP-241ENST00000487169 UBA2Q9UBT2 640 aaPredicted RBP13.67□□□□□ -0.22
HDLBP-241ENST00000487169 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.67□□□□□ -0.22
HDLBP-241ENST00000487169 NALCNQ8IZF0 1738 aa13.67□□□□□ -0.22
HDLBP-241ENST00000487169 HALP42357 657 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 RPL7AP62424 266 aaKnown RBP13.66□□□□□ -0.22
HDLBP-241ENST00000487169 FMO1Q01740 532 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 RNF168Q8IYW5 571 aaPredicted RBP13.66□□□□□ -0.22
HDLBP-241ENST00000487169 ZNF555Q8NEP9 628 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 TNFRSF25Q93038 417 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 ZNF558Q96NG5 402 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 VAV3Q9UKW4 847 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 SF3B1O75533 1304 aaKnown RBP eCLIP13.66□□□□□ -0.224e-6■■■■■ 116.7
HDLBP-241ENST00000487169 NPY2RP49146 381 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 ZNF135P52742 658 aaPredicted RBP13.66□□□□□ -0.22
HDLBP-241ENST00000487169 CRYBB1P53674 252 aaPredicted RBP13.66□□□□□ -0.22
HDLBP-241ENST00000487169 NR6A1Q15406 480 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 N4BP2L1Q5TBK1 243 aaPredicted RBP13.66□□□□□ -0.22
HDLBP-241ENST00000487169 ABHD15Q6UXT9 468 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 C12orf29Q8N999 325 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 TCP10LQ8TDR4 215 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 HPS4Q9NQG7 708 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 TOMM70O94826 608 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 ZNF7P17097 686 aaPredicted RBP13.66□□□□□ -0.22
HDLBP-241ENST00000487169 VCLP18206 1134 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 HDCP19113 662 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 DPYSL3Q14195 570 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 FUT11Q495W5 492 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 HELQQ8TDG4 1101 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 SNRNP25Q9BV90 132 aaKnown RBP13.66□□□□□ -0.22
HDLBP-241ENST00000487169 TAS2R13Q9NYV9 303 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 NINJ2Q9NZG7 142 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 ZNF143P52747 638 aaPredicted RBP13.66□□□□□ -0.22
HDLBP-241ENST00000487169 KLC1Q07866 573 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 NBPF20Q3BBV1 942 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 TPGS1Q6ZTW0 290 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 C4orf32Q8N8J7 132 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 LNX1Q8TBB1 728 aaPredicted RBP13.66□□□□□ -0.22
HDLBP-241ENST00000487169 CYGBQ8WWM9 190 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 CAPN10Q9HC96 672 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 RGS18Q9NS28 235 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 FAM105AQ9NUU6 356 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 CACNA2D2Q9NY47 1150 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 CTNNAL1Q9UBT7 734 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 CDH9Q9ULB4 789 aa13.66□□□□□ -0.22
HDLBP-241ENST00000487169 A0A0B4J269 797 aa13.65□□□□□ -0.22
HDLBP-241ENST00000487169 SLCO1B7G3V0H7 640 aa13.65□□□□□ -0.22
HDLBP-241ENST00000487169 PDE2AO00408 941 aaPredicted RBP13.65□□□□□ -0.22
HDLBP-241ENST00000487169 TM9SF1O15321 606 aa13.65□□□□□ -0.22
HDLBP-241ENST00000487169 TRIM13O60858 407 aa13.65□□□□□ -0.22
HDLBP-241ENST00000487169 CCND1P24385 295 aa13.65□□□□□ -0.22
HDLBP-241ENST00000487169 BCL2L1Q07817 233 aa13.65□□□□□ -0.22
HDLBP-241ENST00000487169 BOP1Q14137 746 aaKnown RBP13.65□□□□□ -0.22
HDLBP-241ENST00000487169 HES6Q96HZ4 224 aa13.65□□□□□ -0.22
HDLBP-241ENST00000487169 EIF2AQ9BY44 585 aaKnown RBP13.65□□□□□ -0.22
HDLBP-241ENST00000487169 PRDM12Q9H4Q4 367 aa13.65□□□□□ -0.22
HDLBP-241ENST00000487169 MRPL17Q9NRX2 175 aaKnown RBP13.65□□□□□ -0.22
HDLBP-241ENST00000487169 BLOC1S6Q9UL45 172 aa13.65□□□□□ -0.22
HDLBP-241ENST00000487169 GNG14A0A1W2PPG7 69 aa13.65□□□□□ -0.22
HDLBP-241ENST00000487169 HACD1B0YJ81 288 aa13.65□□□□□ -0.22
HDLBP-241ENST00000487169 BTBD19C9JJ37 291 aa13.65□□□□□ -0.22
HDLBP-241ENST00000487169 KIF1CO43896 1103 aaKnown RBP13.65□□□□□ -0.22
HDLBP-241ENST00000487169 PEX10O60683 326 aa13.65□□□□□ -0.22
HDLBP-241ENST00000487169 MMP13P45452 471 aa13.65□□□□□ -0.22
HDLBP-241ENST00000487169 RFX3P48380 749 aa13.65□□□□□ -0.22
HDLBP-241ENST00000487169 IFI35P80217 286 aaPredicted RBP13.65□□□□□ -0.22
HDLBP-241ENST00000487169 BMT2Q1RMZ1 405 aa13.65□□□□□ -0.22
HDLBP-241ENST00000487169 C16orf59Q7L2K0 433 aa13.65□□□□□ -0.22
HDLBP-241ENST00000487169 TMEM159Q96B96 161 aa13.65□□□□□ -0.22
HDLBP-241ENST00000487169 SRPK1Q96SB4 655 aaKnown RBP13.65□□□□□ -0.22
HDLBP-241ENST00000487169 C2orf49Q9BVC5 232 aaPredicted RBP13.65□□□□□ -0.22
HDLBP-241ENST00000487169 POLR1EQ9GZS1 481 aaKnown RBP13.65□□□□□ -0.22
HDLBP-241ENST00000487169 NXF3Q9H4D5 531 aaKnown RBP13.65□□□□□ -0.22
HDLBP-241ENST00000487169 C6orf203Q9P0P8 240 aaPredicted RBP13.65□□□□□ -0.22
HDLBP-241ENST00000487169 CDV3Q9UKY7 258 aaKnown RBP13.65□□□□□ -0.22
HDLBP-241ENST00000487169 MGAT4DA6NG13 374 aa13.65□□□□□ -0.22
HDLBP-241ENST00000487169 GUCA1CO95843 209 aa13.65□□□□□ -0.22
HDLBP-241ENST00000487169 NOMO3P69849 1222 aa13.65□□□□□ -0.22
HDLBP-241ENST00000487169 HYIQ5T013 277 aa13.65□□□□□ -0.22
HDLBP-241ENST00000487169 HECTD3Q5T447 861 aa13.65□□□□□ -0.22
HDLBP-241ENST00000487169 LRRC38Q5VT99 294 aa13.65□□□□□ -0.22
HDLBP-241ENST00000487169 FAM183BPQ6ZVS7 135 aa13.65□□□□□ -0.22
HDLBP-241ENST00000487169 MTDHQ86UE4 582 aaKnown RBP13.65□□□□□ -0.22
HDLBP-241ENST00000487169 P3H2Q8IVL5 708 aa13.65□□□□□ -0.22
HDLBP-241ENST00000487169 MSL3Q8N5Y2 521 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms