RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 TOP6BLQ8N6T0 577 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 TEX9Q8N6V9 391 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 RNF169Q8NCN4 708 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 SMG8Q8ND04 991 aaKnown RBP12.68□□□□□ -0.38
PTCD2-204ENST00000486995 CCNYQ8ND76 341 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 ACMSDQ8TDX5 336 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 CDKL2Q92772 493 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 MCUR1Q96AQ8 359 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 NAF1Q96HR8 494 aaKnown RBP12.68□□□□□ -0.38
PTCD2-204ENST00000486995 TSPAN18Q96SJ8 248 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 WWP1Q9H0M0 922 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 MMADHCQ9H3L0 296 aaPredicted RBP12.68□□□□□ -0.38
PTCD2-204ENST00000486995 BATF3Q9NR55 127 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 PIGVQ9NUD9 493 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 SYBUQ9NX95 663 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 SEPT10Q9P0V9 454 aa12.68□□□□□ -0.38
PTCD2-204ENST00000486995 PPARGC1AQ9UBK2 798 aaKnown RBP12.68□□□□□ -0.38
PTCD2-204ENST00000486995 GNEQ9Y223 722 aaKnown RBP12.68□□□□□ -0.38
PTCD2-204ENST00000486995 SF3B1O75533 1304 aaKnown RBP eCLIP12.68□□□□□ -0.38
PTCD2-204ENST00000486995 TREHO43280 583 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 CAPN15O75808 1086 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 STK10O94804 968 aaKnown RBP12.67□□□□□ -0.38
PTCD2-204ENST00000486995 PTPN1P18031 435 aaKnown RBP12.67□□□□□ -0.38
PTCD2-204ENST00000486995 CPA2P48052 419 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 GTF2A2P52657 109 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 NME3Q13232 169 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 PAFAH1B3Q15102 231 aaKnown RBP12.67□□□□□ -0.38
PTCD2-204ENST00000486995 N4BP2L1Q5TBK1 243 aaPredicted RBP12.67□□□□□ -0.38
PTCD2-204ENST00000486995 KIAA0319Q5VV43 1072 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 BSPRYQ5W0U4 402 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 MBLAC2Q68D91 279 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 CLEC20AQ6ZU45 233 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 PLEKHH3Q7Z736 793 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 SMC1BQ8NDV3 1235 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 FBXO27Q8NI29 283 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 WDR60Q8WVS4 1066 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 KCTD13Q8WZ19 329 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 SLC2A13Q96QE2 648 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 DNAI2Q9GZS0 605 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.67□□□□□ -0.38
PTCD2-204ENST00000486995 IPPQ9Y573 584 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 B2RBV5 119 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 DCLK1O15075 740 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 ITM2AO43736 263 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 FYNP06241 537 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 ENO1P06733 434 aaKnown RBP12.67□□□□□ -0.38
PTCD2-204ENST00000486995 CDC25CP30307 473 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 MFSD10Q14728 455 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 WSCD1Q658N2 575 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 RFX8Q6ZV50 586 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 ANKRD23Q86SG2 305 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 NME8Q8N427 588 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 WNT8BQ93098 351 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 EBF4Q9BQW3 602 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 CCDC106Q9BWC9 280 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 IL1RAPL1Q9NZN1 696 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 IGSF9Q9P2J2 1179 aa12.67□□□□□ -0.38
PTCD2-204ENST00000486995 MYO18AQ92614 2054 aaKnown RBP12.67□□□□□ -0.38
PTCD2-204ENST00000486995 PDCD11Q14690 1871 aaKnown RBP12.66□□□□□ -0.38
PTCD2-204ENST00000486995 FAM72CH0Y354 149 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 PLIN3O60664 434 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 PRKCGP05129 697 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 ITGA2BP08514 1039 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 FGF3P11487 239 aaPredicted RBP12.66□□□□□ -0.38
PTCD2-204ENST00000486995 RPL10AP62906 217 aaKnown RBP12.66□□□□□ -0.38
PTCD2-204ENST00000486995 DEUP1Q05D60 604 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 DBN1Q16643 649 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 TEDDM1Q5T9Z0 273 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 FAM72AQ5TYM5 149 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 FAM72DQ6L9T8 149 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 CES3Q6UWW8 571 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 FAM72BQ86X60 149 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 TMPRSS6Q8IU80 811 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 LENG1Q96BZ8 264 aaPredicted RBP12.66□□□□□ -0.38
PTCD2-204ENST00000486995 PGBD4Q96DM1 585 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 ZNF778Q96MU6 729 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 NAT9Q9BTE0 207 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 ZNF408Q9H9D4 720 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 LRRC4Q9HBW1 653 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 ANLNQ9NQW6 1124 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 STAP1Q9ULZ2 295 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 I6L893 689 aaPredicted RBP12.66□□□□□ -0.38
PTCD2-204ENST00000486995 EEF2KO00418 725 aaKnown RBP12.66□□□□□ -0.38
PTCD2-204ENST00000486995 PTGESO14684 152 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 GABRDO14764 452 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 NRP1O14786 923 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 PPP1R12AO14974 1030 aaPredicted RBP12.66□□□□□ -0.38
PTCD2-204ENST00000486995 GLRA3O75311 464 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 LYPLA1O75608 230 aaPredicted RBP12.66□□□□□ -0.38
PTCD2-204ENST00000486995 KRT36O76013 467 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 ERVK-10P10266 1014 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 MLH1P40692 756 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 ABL2P42684 1182 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 RABGGTBP53611 331 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 NAB1Q13506 487 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 OLIG2Q13516 323 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 SMAD1Q15797 465 aaKnown RBP12.66□□□□□ -0.38
PTCD2-204ENST00000486995 MDH1BQ5I0G3 518 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 ATG14Q6ZNE5 492 aa12.66□□□□□ -0.38
PTCD2-204ENST00000486995 PID1Q7Z2X4 250 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms