RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	PML	P29590	882 aa		13.6	□□□□□ -0.23
NR1H3-223	ENST00000486991	OPRD1	P41143	372 aa		13.6	□□□□□ -0.23
NR1H3-223	ENST00000486991	DGKE	P52429	567 aa		13.6	□□□□□ -0.23
NR1H3-223	ENST00000486991	LIMK1	P53667	647 aa		13.6	□□□□□ -0.23
NR1H3-223	ENST00000486991	CREB5	Q02930	508 aa		13.6	□□□□□ -0.23
NR1H3-223	ENST00000486991	MESP2	Q0VG99	397 aa		13.6	□□□□□ -0.23
NR1H3-223	ENST00000486991	TAF5	Q15542	800 aa		13.6	□□□□□ -0.23
NR1H3-223	ENST00000486991	EFHC1	Q5JVL4	640 aa		13.6	□□□□□ -0.23
NR1H3-223	ENST00000486991	DCUN1D2	Q6PH85	259 aa		13.6	□□□□□ -0.23
NR1H3-223	ENST00000486991	SCML4	Q8N228	414 aa		13.6	□□□□□ -0.23
NR1H3-223	ENST00000486991	CAMKK1	Q8N5S9	505 aa		13.6	□□□□□ -0.23
NR1H3-223	ENST00000486991	C3orf20	Q8ND61	904 aa		13.6	□□□□□ -0.23
NR1H3-223	ENST00000486991	NUP85	Q9BW27	656 aa		13.6	□□□□□ -0.23
NR1H3-223	ENST00000486991	MRPL47	Q9HD33	250 aa	Known RBP	13.6	□□□□□ -0.23
NR1H3-223	ENST00000486991	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
NR1H3-223	ENST00000486991	CTTNBP2NL	Q9P2B4	639 aa		13.6	□□□□□ -0.23
NR1H3-223	ENST00000486991	PPP2R2C	Q9Y2T4	447 aa		13.6	□□□□□ -0.23
NR1H3-223	ENST00000486991	SCIN	Q9Y6U3	715 aa		13.6	□□□□□ -0.23
NR1H3-223	ENST00000486991	CEP295	Q9C0D2	2601 aa		13.6	□□□□□ -0.23
NR1H3-223	ENST00000486991		A0A0U1RQJ8	604 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	E2F8	A0AVK6	867 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	KCNK5	O95279	499 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	LTF	P02788	710 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	KRT3	P12035	628 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	BCKDHB	P21953	392 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	SCNN1A	P37088	669 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	GSC	P56915	257 aa	Predicted RBP	13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	YWHAG	P61981	247 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	KIF5A	Q12840	1032 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	MAMLD1	Q13495	774 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	HS1BP3	Q53T59	392 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	C2orf27A	Q580R0	203 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	BTBD8	Q5XKL5	378 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	RNF43	Q68DV7	783 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	PLEKHA7	Q6IQ23	1121 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	SYT13	Q7L8C5	426 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	SLC26A9	Q7LBE3	791 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	TADA2B	Q86TJ2	420 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	ARHGAP18	Q8N392	663 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	ZNF276	Q8N554	614 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	CCDC33	Q8N5R6	958 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	JOSD2	Q8TAC2	188 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	RFFL	Q8WZ73	363 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	OTUB2	Q96DC9	234 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	MCEE	Q96PE7	176 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	KLF16	Q9BXK1	252 aa	Predicted RBP	13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	LACRT	Q9GZZ8	138 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	ZDHHC4	Q9NPG8	344 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	TLR8	Q9NR97	1041 aa	Known RBP	13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	VPS45	Q9NRW7	570 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	ANGPTL2	Q9UKU9	493 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	ZZEF1	O43149	2961 aa		13.59	□□□□□ -0.23
NR1H3-223	ENST00000486991	PLXND1	Q9Y4D7	1925 aa		13.58	□□□□□ -0.23
NR1H3-223	ENST00000486991	ABCA7	Q8IZY2	2146 aa		13.58	□□□□□ -0.23
NR1H3-223	ENST00000486991	GON4L	Q3T8J9	2241 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	AKAP13	Q12802	2813 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	TCRBV5S1A1T	A0A578	114 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	SIGLEC16	A6NMB1	481 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	C4orf47	A7E2U8	309 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	PATE3	B3GLJ2	98 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991		K7EQS6	105 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	CAPN9	O14815	690 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	MDM4	O15151	490 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	PJA2	O43164	708 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	ZSCAN12	O43309	604 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	FOXD2	O60548	495 aa	Predicted RBP	13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	HSF2BP	O75031	334 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	APBB3	O95704	486 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	GLI1	P08151	1106 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	HNRNPL	P14866	589 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	GBP1	P32455	592 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	NOP2	P46087	812 aa	Known RBP	13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	SLC6A11	P48066	632 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	YWHAZ	P63104	245 aa	Known RBP	13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	DHCR24	Q15392	516 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	PREPL	Q4J6C6	727 aa	Predicted RBP	13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	BSPRY	Q5W0U4	402 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	PSAPL1	Q6NUJ1	521 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	KLHDC10	Q6PID8	442 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	RHBDF2	Q6PJF5	856 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	C12orf40	Q86WS4	652 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	BBS7	Q8IWZ6	715 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	RHOT2	Q8IXI1	618 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	ADGRG2	Q8IZP9	1017 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	PHTF2	Q8N3S3	785 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	EMC1	Q8N766	993 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	SLC35G2	Q8TBE7	412 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	ZNF564	Q8TBZ8	553 aa	Predicted RBP	13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	EDEM1	Q92611	657 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	P2RY11	Q96G91	374 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	EDEM2	Q9BV94	578 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	POPDC2	Q9HBU9	364 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	ASNSD1	Q9NWL6	643 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	TRMT1	Q9NXH9	659 aa	Known RBP	13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	TRIM10	Q9UDY6	481 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	TMEM59L	Q9UK28	342 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	SH3BP1	Q9Y3L3	701 aa		13.58	□□□□□ -0.24
NR1H3-223	ENST00000486991	BCLAF3	A2AJT9	711 aa	Known RBP	13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	KRT86	O43790	486 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	DAB1	O75553	588 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms