RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 TMEM62Q0P6H9 643 aa12.72□□□□□ -0.37
HSPG2-211ENST00000486901 MAP7Q14244 749 aa12.72□□□□□ -0.37
HSPG2-211ENST00000486901 PITRM1Q5JRX3 1037 aa12.72□□□□□ -0.37
HSPG2-211ENST00000486901 TMCO4Q5TGY1 634 aa12.72□□□□□ -0.37
HSPG2-211ENST00000486901 CCNYL1Q8N7R7 359 aa12.72□□□□□ -0.37
HSPG2-211ENST00000486901 DIS3LQ8TF46 1054 aaKnown RBP12.72□□□□□ -0.37
HSPG2-211ENST00000486901 PCDHAC1Q9H158 963 aa12.72□□□□□ -0.37
HSPG2-211ENST00000486901 PPCSQ9HAB8 311 aa12.72□□□□□ -0.37
HSPG2-211ENST00000486901 SYBUQ9NX95 663 aa12.72□□□□□ -0.37
HSPG2-211ENST00000486901 DDX43Q9NXZ2 648 aaKnown RBP12.72□□□□□ -0.37
HSPG2-211ENST00000486901 ADA2Q9NZK5 511 aa12.72□□□□□ -0.37
HSPG2-211ENST00000486901 RBBP6Q7Z6E9 1792 aaKnown RBP12.72□□□□□ -0.37
HSPG2-211ENST00000486901 LACTBL1A8MY62 500 aa12.72□□□□□ -0.37
HSPG2-211ENST00000486901 C9JVG2 144 aa12.72□□□□□ -0.37
HSPG2-211ENST00000486901 MSCO60682 206 aa12.72□□□□□ -0.37
HSPG2-211ENST00000486901 DNAJA2O60884 412 aa12.72□□□□□ -0.37
HSPG2-211ENST00000486901 FKBP6O75344 327 aa12.72□□□□□ -0.37
HSPG2-211ENST00000486901 TFAP2AP05549 437 aa12.72□□□□□ -0.37
HSPG2-211ENST00000486901 ITGA2BP08514 1039 aa12.72□□□□□ -0.37
HSPG2-211ENST00000486901 TFPTP0C1Z6 253 aa12.72□□□□□ -0.37
HSPG2-211ENST00000486901 IQCF3P0C7M6 154 aa12.72□□□□□ -0.37
HSPG2-211ENST00000486901 PTPN1P18031 435 aaKnown RBP12.72□□□□□ -0.37
HSPG2-211ENST00000486901 STILQ15468 1287 aa12.72□□□□□ -0.37
HSPG2-211ENST00000486901 ANKRD20A4Q4UJ75 823 aa12.72□□□□□ -0.37
HSPG2-211ENST00000486901 HEATR6Q6AI08 1181 aaKnown RBP12.72□□□□□ -0.37
HSPG2-211ENST00000486901 SESTD1Q86VW0 696 aa12.72□□□□□ -0.37
HSPG2-211ENST00000486901 WDR49Q8IV35 697 aa12.72□□□□□ -0.37
HSPG2-211ENST00000486901 MRPL4Q9BYD3 311 aaKnown RBP12.72□□□□□ -0.37
HSPG2-211ENST00000486901 CAAP1Q9H8G2 361 aa12.72□□□□□ -0.37
HSPG2-211ENST00000486901 ADGRA2Q96PE1 1338 aa12.72□□□□□ -0.37
HSPG2-211ENST00000486901 TMX2-CTNND1H3BSU7 103 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 TK2O00142 265 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 OGTO15294 1046 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 TPST1O60507 370 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 CRTAMO95727 393 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 P4HA1P13674 534 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 GPD2P43304 727 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 NME5P56597 212 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 PITX1P78337 314 aaPredicted RBP12.71□□□□□ -0.37
HSPG2-211ENST00000486901 MAP3K10Q02779 954 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 TFDP2Q14188 446 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 GOLGA7BQ2TAP0 167 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 HSDL1Q3SXM5 330 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 HSP90AA5PQ58FG0 334 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 PACS1Q6VY07 963 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 CTU1Q7Z7A3 348 aaKnown RBP12.71□□□□□ -0.37
HSPG2-211ENST00000486901 TRIM42Q8IWZ5 723 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 TMEM176AQ96HP8 235 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 SCYL1Q96KG9 808 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 PCYT2Q99447 389 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 DHX33Q9H6R0 707 aaKnown RBP12.71□□□□□ -0.37
HSPG2-211ENST00000486901 SUDS3Q9H7L9 328 aaPredicted RBP12.71□□□□□ -0.37
HSPG2-211ENST00000486901 H3BNX3 289 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 GPR25O00155 361 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 PPEF2O14830 753 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 CHADO15335 359 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 PGK2P07205 417 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 PSMB4P28070 264 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 SDC4P31431 198 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 CRHR1P34998 444 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 WASHC5Q12768 1159 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 RALGDSQ12967 914 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 KLF10Q13118 480 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 LCA5Q86VQ0 697 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 CCDC185Q8N715 623 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 DNAAF3Q8N9W5 541 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 C20orf96Q9NUD7 363 aaPredicted RBP12.71□□□□□ -0.37
HSPG2-211ENST00000486901 CNTN6Q9UQ52 1028 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 GNEQ9Y223 722 aaKnown RBP12.71□□□□□ -0.37
HSPG2-211ENST00000486901 SLX4Q8IY92 1834 aa12.71□□□□□ -0.37
HSPG2-211ENST00000486901 VILLO15195 856 aa12.71□□□□□ -0.38
HSPG2-211ENST00000486901 DKC1O60832 514 aaKnown RBP eCLIP12.71□□□□□ -0.38
HSPG2-211ENST00000486901 SUPT3HO75486 399 aa12.71□□□□□ -0.38
HSPG2-211ENST00000486901 CPA3P15088 417 aa12.71□□□□□ -0.38
HSPG2-211ENST00000486901 ARL2P36404 184 aa12.71□□□□□ -0.38
HSPG2-211ENST00000486901 BAG6P46379 1132 aa12.71□□□□□ -0.38
HSPG2-211ENST00000486901 PPP1R26Q5T8A7 1209 aaPredicted RBP12.71□□□□□ -0.38
HSPG2-211ENST00000486901 SLC9A4Q6AI14 798 aa12.71□□□□□ -0.38
HSPG2-211ENST00000486901 UGT2A3Q6UWM9 527 aa12.71□□□□□ -0.38
HSPG2-211ENST00000486901 LILRA2Q8N149 483 aa12.71□□□□□ -0.38
HSPG2-211ENST00000486901 FBXW8Q8N3Y1 598 aa12.71□□□□□ -0.38
HSPG2-211ENST00000486901 NIPA2Q8N8Q9 360 aa12.71□□□□□ -0.38
HSPG2-211ENST00000486901 OR52K1Q8NGK4 314 aa12.71□□□□□ -0.38
HSPG2-211ENST00000486901 FAM110BQ8TC76 370 aa12.71□□□□□ -0.38
HSPG2-211ENST00000486901 OLFM3Q96PB7 478 aa12.71□□□□□ -0.38
HSPG2-211ENST00000486901 ACO2Q99798 780 aaKnown RBP12.71□□□□□ -0.38
HSPG2-211ENST00000486901 PKP2Q99959 881 aa12.71□□□□□ -0.38
HSPG2-211ENST00000486901 CNPY3Q9BT09 278 aa12.71□□□□□ -0.38
HSPG2-211ENST00000486901 RPF1Q9H9Y2 349 aaKnown RBP12.71□□□□□ -0.38
HSPG2-211ENST00000486901 HSFX1Q9UBD0 423 aa12.71□□□□□ -0.38
HSPG2-211ENST00000486901 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.7□□□□□ -0.38
HSPG2-211ENST00000486901 TSPAN8P19075 237 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 AOC1P19801 751 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 UBA1P22314 1058 aaKnown RBP12.7□□□□□ -0.38
HSPG2-211ENST00000486901 ZNF143P52747 638 aaPredicted RBP12.7□□□□□ -0.38
HSPG2-211ENST00000486901 KCTD21Q4G0X4 260 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 ATF7IP2Q5U623 682 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 RNF135Q8IUD6 432 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 MAP7D3Q8IWC1 876 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 MYO1HQ8N1T3 1032 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms