RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 SPC24Q8NBT2 197 aa18.39■□□□□ 0.53
MCF2L-226ENST00000486210 ZNF397Q8NF99 534 aaPredicted RBP18.39■□□□□ 0.53
MCF2L-226ENST00000486210 SCAMP5Q8TAC9 235 aa18.39■□□□□ 0.53
MCF2L-226ENST00000486210 SLC6A17Q9H1V8 727 aa18.39■□□□□ 0.53
MCF2L-226ENST00000486210 CCSER2Q9H7U1 834 aa18.39■□□□□ 0.53
MCF2L-226ENST00000486210 CSNK1G1Q9HCP0 422 aa18.39■□□□□ 0.53
MCF2L-226ENST00000486210 GMIPQ9P107 970 aa18.39■□□□□ 0.53
MCF2L-226ENST00000486210 ANKRD11Q6UB99 2663 aaPredicted RBP18.39■□□□□ 0.53
MCF2L-226ENST00000486210 HHLA1C9JL84 531 aa18.38■□□□□ 0.53
MCF2L-226ENST00000486210 SYPP08247 313 aa18.38■□□□□ 0.53
MCF2L-226ENST00000486210 FTH1P19P0C7X4 201 aa18.38■□□□□ 0.53
MCF2L-226ENST00000486210 PDE4CQ08493 712 aa18.38■□□□□ 0.53
MCF2L-226ENST00000486210 SLC14A1Q13336 389 aa18.38■□□□□ 0.53
MCF2L-226ENST00000486210 STILQ15468 1287 aa18.38■□□□□ 0.53
MCF2L-226ENST00000486210 COL28A1Q2UY09 1125 aa18.38■□□□□ 0.53
MCF2L-226ENST00000486210 SNX30Q5VWJ9 437 aa18.38■□□□□ 0.53
MCF2L-226ENST00000486210 PDZD3Q86UT5 571 aa18.38■□□□□ 0.53
MCF2L-226ENST00000486210 PASD1Q8IV76 773 aa18.38■□□□□ 0.53
MCF2L-226ENST00000486210 DRC7Q8IY82 874 aa18.38■□□□□ 0.53
MCF2L-226ENST00000486210 IPO4Q8TEX9 1081 aaKnown RBP18.38■□□□□ 0.53
MCF2L-226ENST00000486210 ZNF419Q96HQ0 510 aaPredicted RBP18.38■□□□□ 0.53
MCF2L-226ENST00000486210 TLR8Q9NR97 1041 aaKnown RBP18.38■□□□□ 0.53
MCF2L-226ENST00000486210 PCDHGC3Q9UN70 934 aa18.38■□□□□ 0.53
MCF2L-226ENST00000486210 FAM170AA1A519 330 aa18.37■□□□□ 0.53
MCF2L-226ENST00000486210 AKR1B15C9JRZ8 316 aaPredicted RBP18.37■□□□□ 0.53
MCF2L-226ENST00000486210 MED7O43513 233 aa18.37■□□□□ 0.53
MCF2L-226ENST00000486210 GREM1O60565 184 aa18.37■□□□□ 0.53
MCF2L-226ENST00000486210 TLR5O60602 858 aa18.37■□□□□ 0.53
MCF2L-226ENST00000486210 ZNF217O75362 1048 aa18.37■□□□□ 0.53
MCF2L-226ENST00000486210 ZDHHC11BP0C7U3 371 aa18.37■□□□□ 0.53
MCF2L-226ENST00000486210 IRF1P10914 325 aa18.37■□□□□ 0.53
MCF2L-226ENST00000486210 FMO1Q01740 532 aa18.37■□□□□ 0.53
MCF2L-226ENST00000486210 ARID5BQ14865 1188 aa18.37■□□□□ 0.53
MCF2L-226ENST00000486210 ANO4Q32M45 955 aa18.37■□□□□ 0.53
MCF2L-226ENST00000486210 PLEKHG6Q3KR16 790 aa18.37■□□□□ 0.53
MCF2L-226ENST00000486210 HGSNATQ68CP4 663 aa18.37■□□□□ 0.53
MCF2L-226ENST00000486210 CCNI2Q6ZMN8 369 aaPredicted RBP18.37■□□□□ 0.53
MCF2L-226ENST00000486210 GPRIN1Q7Z2K8 1008 aa18.37■□□□□ 0.53
MCF2L-226ENST00000486210 NAXDQ8IW45 347 aa18.37■□□□□ 0.53
MCF2L-226ENST00000486210 WDTC1Q8N5D0 677 aa18.37■□□□□ 0.53
MCF2L-226ENST00000486210 TC2NQ8N9U0 490 aa18.37■□□□□ 0.53
MCF2L-226ENST00000486210 SYN2Q92777 582 aaPredicted RBP18.37■□□□□ 0.53
MCF2L-226ENST00000486210 PCDHB18PQ96TA0 734 aa18.37■□□□□ 0.53
MCF2L-226ENST00000486210 DNAJC7Q99615 494 aa18.37■□□□□ 0.53
MCF2L-226ENST00000486210 GABRG3Q99928 467 aa18.37■□□□□ 0.53
MCF2L-226ENST00000486210 SYT11Q9BT88 431 aa18.37■□□□□ 0.53
MCF2L-226ENST00000486210 HAUS4Q9H6D7 363 aa18.37■□□□□ 0.53
MCF2L-226ENST00000486210 IL37Q9NZH6 218 aa18.37■□□□□ 0.53
MCF2L-226ENST00000486210 HESX1Q9UBX0 185 aa18.37■□□□□ 0.53
MCF2L-226ENST00000486210 CYTH4Q9UIA0 394 aa18.37■□□□□ 0.53
MCF2L-226ENST00000486210 LSM7Q9UK45 103 aaKnown RBP18.37■□□□□ 0.53
MCF2L-226ENST00000486210 RAD54BQ9Y620 910 aa18.37■□□□□ 0.53
MCF2L-226ENST00000486210 PRRT4C9JH25 899 aa18.36■□□□□ 0.53
MCF2L-226ENST00000486210 ZBTB24O43167 697 aaPredicted RBP18.36■□□□□ 0.53
MCF2L-226ENST00000486210 GABBR2O75899 941 aa18.36■□□□□ 0.53
MCF2L-226ENST00000486210 PLEKP08567 350 aaPredicted RBP18.36■□□□□ 0.53
MCF2L-226ENST00000486210 TPM1P09493 284 aa18.36■□□□□ 0.53
MCF2L-226ENST00000486210 MAOBP27338 520 aa18.36■□□□□ 0.53
MCF2L-226ENST00000486210 PRKCIP41743 596 aa18.36■□□□□ 0.53
MCF2L-226ENST00000486210 GPD2P43304 727 aa18.36■□□□□ 0.53
MCF2L-226ENST00000486210 PGFP49763 221 aa18.36■□□□□ 0.53
MCF2L-226ENST00000486210 BCAT1P54687 386 aa18.36■□□□□ 0.53
MCF2L-226ENST00000486210 CDR2Q01850 454 aa18.36■□□□□ 0.53
MCF2L-226ENST00000486210 BST2Q10589 180 aaKnown RBP18.36■□□□□ 0.53
MCF2L-226ENST00000486210 WDR59Q6PJI9 974 aa18.36■□□□□ 0.53
MCF2L-226ENST00000486210 TOGARAM2Q6ZUX3 1019 aa18.36■□□□□ 0.53
MCF2L-226ENST00000486210 ZNF571Q7Z3V5 609 aaPredicted RBP18.36■□□□□ 0.53
MCF2L-226ENST00000486210 SLCO6A1Q86UG4 719 aa18.36■□□□□ 0.53
MCF2L-226ENST00000486210 CHPFQ8IZ52 775 aa18.36■□□□□ 0.53
MCF2L-226ENST00000486210 RGL4Q8IZJ4 473 aa18.36■□□□□ 0.53
MCF2L-226ENST00000486210 OR8K1Q8NGG5 319 aa18.36■□□□□ 0.53
MCF2L-226ENST00000486210 SLC35F5Q8WV83 523 aa18.36■□□□□ 0.53
MCF2L-226ENST00000486210 AGPAT1Q99943 283 aa18.36■□□□□ 0.53
MCF2L-226ENST00000486210 NUCKS1Q9H1E3 243 aaKnown RBP18.36■□□□□ 0.53
MCF2L-226ENST00000486210 ABHD10Q9NUJ1 306 aa18.36■□□□□ 0.53
MCF2L-226ENST00000486210 DNAJC17Q9NVM6 304 aaKnown RBP18.36■□□□□ 0.53
MCF2L-226ENST00000486210 FAM92AA1XBS5 289 aa18.35■□□□□ 0.53
MCF2L-226ENST00000486210 XPO1O14980 1071 aaKnown RBP18.35■□□□□ 0.53
MCF2L-226ENST00000486210 CBFA2T3O75081 653 aa18.35■□□□□ 0.53
MCF2L-226ENST00000486210 CCDC172P0C7W6 258 aa18.35■□□□□ 0.53
MCF2L-226ENST00000486210 HNRNPH3P31942 346 aaKnown RBP18.35■□□□□ 0.53
MCF2L-226ENST00000486210 RGS7P49802 495 aa18.35■□□□□ 0.53
MCF2L-226ENST00000486210 KLHL30Q0D2K2 578 aa18.35■□□□□ 0.53
MCF2L-226ENST00000486210 GRIK2Q13002 908 aa18.35■□□□□ 0.53
MCF2L-226ENST00000486210 GRAMD4Q6IC98 578 aa18.35■□□□□ 0.53
MCF2L-226ENST00000486210 PMF1Q6P1K2 205 aa18.35■□□□□ 0.53
MCF2L-226ENST00000486210 TADA2BQ86TJ2 420 aa18.35■□□□□ 0.53
MCF2L-226ENST00000486210 PIGZQ86VD9 579 aa18.35■□□□□ 0.53
MCF2L-226ENST00000486210 ZNF677Q86XU0 584 aa18.35■□□□□ 0.53
MCF2L-226ENST00000486210 C1orf131Q8NDD1 294 aaKnown RBP18.35■□□□□ 0.53
MCF2L-226ENST00000486210 MDM1Q8TC05 714 aa18.35■□□□□ 0.53
MCF2L-226ENST00000486210 MRGPRX1Q96LB2 322 aa18.35■□□□□ 0.53
MCF2L-226ENST00000486210 LHX5Q9H2C1 402 aa18.35■□□□□ 0.53
MCF2L-226ENST00000486210 CCDC86Q9H6F5 360 aaKnown RBP18.35■□□□□ 0.53
MCF2L-226ENST00000486210 PCDHB9Q9Y5E1 797 aa18.35■□□□□ 0.53
MCF2L-226ENST00000486210 MYH10P35580 1976 aa18.35■□□□□ 0.53
MCF2L-226ENST00000486210 WASH3PC4AMC7 463 aa18.34■□□□□ 0.53
MCF2L-226ENST00000486210 NEDD8-MDP1E9PL57 170 aa18.34■□□□□ 0.53
MCF2L-226ENST00000486210 CACNG3O60359 315 aa18.34■□□□□ 0.53
MCF2L-226ENST00000486210 SERPING1P05155 500 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms