RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 CMTM8Q8IZV2 173 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 SLC35G2Q8TBE7 412 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 ZNF564Q8TBZ8 553 aaPredicted RBP5.86□□□□□ -1.47
COPS3-208ENST00000486032 DQX1Q8TE96 717 aaKnown RBP5.86□□□□□ -1.47
COPS3-208ENST00000486032 FAM172AQ8WUF8 416 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 RSAD2Q8WXG1 361 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 SUSD6Q92537 303 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 TRIM44Q96DX7 344 aaPredicted RBP5.86□□□□□ -1.47
COPS3-208ENST00000486032 VCPIP1Q96JH7 1222 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 TBCBQ99426 244 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 KXD1Q9BQD3 176 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 PHF7Q9BWX1 381 aaPredicted RBP5.86□□□□□ -1.47
COPS3-208ENST00000486032 RAB6CQ9H0N0 254 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 MRPL47Q9HD33 250 aaKnown RBP5.86□□□□□ -1.47
COPS3-208ENST00000486032 LZTFL1Q9NQ48 299 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 OLA1Q9NTK5 396 aaKnown RBP5.86□□□□□ -1.47
COPS3-208ENST00000486032 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.86□□□□□ -1.47
COPS3-208ENST00000486032 DDIT4Q9NX09 232 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 TRMT1Q9NXH9 659 aaKnown RBP5.86□□□□□ -1.47
COPS3-208ENST00000486032 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.86□□□□□ -1.47
COPS3-208ENST00000486032 MARCH2Q9P0N8 246 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 CFAP97Q9P2B7 532 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 TRIM10Q9UDY6 481 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 ANAPC7Q9UJX3 599 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 TMEM59LQ9UK28 342 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 STAP1Q9ULZ2 295 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 NENFQ9UMX5 172 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 FAM50BQ9Y247 325 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 CCL26Q9Y258 94 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 REXO2Q9Y3B8 237 aaKnown RBP5.86□□□□□ -1.47
COPS3-208ENST00000486032 SH3BP1Q9Y3L3 701 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 PAXBP1Q9Y5B6 917 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 OBSL1O75147 1896 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 TCRBV5S1A1TA0A578 114 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 MACROD2A1Z1Q3 448 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 FAM86C2PA6NEL3 165 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 HEPACAM2A8MVW5 462 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 MYO1FO00160 1098 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 LEFTY2O00292 366 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 DLL1O00548 723 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 RNF8O76064 485 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 MOCS3O95396 460 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 LCA5LO95447 670 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 CYP1A2P05177 515 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 GLI1P08151 1106 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 CCDC175P0C221 793 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 LAMP2P13473 410 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 ALAS2P22557 587 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 MSX1P28360 303 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 CORO1AP31146 461 aaKnown RBP5.85□□□□□ -1.47
COPS3-208ENST00000486032 GBP1P32455 592 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 VAV2P52735 878 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 OGDHQ02218 1023 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 ZP2Q05996 745 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 KIF5AQ12840 1032 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 AAK1Q2M2I8 961 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 CCDC14Q49A88 953 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 ZC3H12AQ5D1E8 599 aaKnown RBP5.85□□□□□ -1.47
COPS3-208ENST00000486032 FAM78AQ5JUQ0 283 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 C10orf76Q5T2E6 689 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 TANGO2Q6ICL3 276 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 PLEKHA7Q6IQ23 1121 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 PARM1Q6UWI2 310 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 SND1Q7KZF4 910 aaKnown RBP eCLIP5.85□□□□□ -1.47
COPS3-208ENST00000486032 CYP2U1Q7Z449 544 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 FAM131BQ86XD5 332 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 CPNE8Q86YQ8 564 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 DENND1CQ8IV53 801 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 SCML4Q8N228 414 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 TTC8Q8TAM2 541 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 SH3RF2Q8TEC5 729 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 SMARCD2Q92925 531 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 USP13Q92995 863 aaPredicted RBP5.85□□□□□ -1.47
COPS3-208ENST00000486032 WBP2Q969T9 261 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 ZFYVE19Q96K21 471 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 SERPINB11Q96P15 392 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 SLC2A13Q96QE2 648 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 CDK5RAP1Q96SZ6 601 aaKnown RBP5.85□□□□□ -1.47
COPS3-208ENST00000486032 UHRF1Q96T88 793 aaPredicted RBP5.85□□□□□ -1.47
COPS3-208ENST00000486032 DDX23Q9BUQ8 820 aaKnown RBP5.85□□□□□ -1.47
COPS3-208ENST00000486032 TRIM62Q9BVG3 475 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 PLA2G2FQ9BZM2 168 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 LACRTQ9GZZ8 138 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 EPHX3Q9H6B9 360 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 ZFP14Q9HCL3 533 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 C11orf16Q9NQ32 467 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 TDP1Q9NUW8 608 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 ASNSD1Q9NWL6 643 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 CLIC5Q9NZA1 410 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 LIMD1Q9UGP4 676 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 PCSK1NQ9UHG2 260 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 LSM7Q9UK45 103 aaKnown RBP5.85□□□□□ -1.47
COPS3-208ENST00000486032 PYCARDQ9ULZ3 195 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 GUCA1BQ9UMX6 200 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 NR2E1Q9Y466 385 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 HYOU1Q9Y4L1 999 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 SNX10Q9Y5X0 201 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.85□□□□□ -1.47
COPS3-208ENST00000486032 DUSP10Q9Y6W6 482 aa5.85□□□□□ -1.47
COPS3-208ENST00000486032 ANAPC1Q9H1A4 1944 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms