RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 ACSF2Q96CM8 615 aaPredicted RBP16.37■□□□□ 0.21
APOE-205ENST00000485628 PRICKLE1Q96MT3 831 aaPredicted RBP16.37■□□□□ 0.21
APOE-205ENST00000485628 LINC00597Q9H2U6 94 aa16.37■□□□□ 0.21
APOE-205ENST00000485628 RETREG1Q9H6L5 497 aa16.37■□□□□ 0.21
APOE-205ENST00000485628 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.37■□□□□ 0.21
APOE-205ENST00000485628 CWC15Q9P013 229 aaKnown RBP16.37■□□□□ 0.21
APOE-205ENST00000485628 LSM7Q9UK45 103 aaKnown RBP16.37■□□□□ 0.21
APOE-205ENST00000485628 EFR3BQ9Y2G0 817 aa16.37■□□□□ 0.21
APOE-205ENST00000485628 SH3BP1Q9Y3L3 701 aa16.37■□□□□ 0.21
APOE-205ENST00000485628 NR2E1Q9Y466 385 aa16.37■□□□□ 0.21
APOE-205ENST00000485628 SNX10Q9Y5X0 201 aa16.37■□□□□ 0.21
APOE-205ENST00000485628 C19orf67A6NJJ6 358 aa16.36■□□□□ 0.21
APOE-205ENST00000485628 ENC1O14682 589 aa16.36■□□□□ 0.21
APOE-205ENST00000485628 MOCS2O96007 188 aaPredicted RBP16.36■□□□□ 0.21
APOE-205ENST00000485628 PYGMP11217 842 aa16.36■□□□□ 0.21
APOE-205ENST00000485628 PSMC3P17980 439 aa16.36■□□□□ 0.21
APOE-205ENST00000485628 MSNP26038 577 aaKnown RBP16.36■□□□□ 0.21
APOE-205ENST00000485628 CHKAP35790 457 aa16.36■□□□□ 0.21
APOE-205ENST00000485628 CDKN2BP42772 138 aa16.36■□□□□ 0.21
APOE-205ENST00000485628 RWDD2BP57060 319 aa16.36■□□□□ 0.21
APOE-205ENST00000485628 DPYSQ14117 519 aa16.36■□□□□ 0.21
APOE-205ENST00000485628 EML3Q32P44 896 aa16.36■□□□□ 0.21
APOE-205ENST00000485628 MPP7Q5T2T1 576 aa16.36■□□□□ 0.21
APOE-205ENST00000485628 RAP1GAP2Q684P5 730 aa16.36■□□□□ 0.21
APOE-205ENST00000485628 NLRP14Q86W24 1093 aa16.36■□□□□ 0.21
APOE-205ENST00000485628 DEPDC1BQ8WUY9 529 aa16.36■□□□□ 0.21
APOE-205ENST00000485628 HSPH1Q92598 858 aa16.36■□□□□ 0.21
APOE-205ENST00000485628 IGSF8Q969P0 613 aa16.36■□□□□ 0.21
APOE-205ENST00000485628 ZNF670Q9BS34 389 aa16.36■□□□□ 0.21
APOE-205ENST00000485628 CARD9Q9H257 536 aa16.36■□□□□ 0.21
APOE-205ENST00000485628 DHX35Q9H5Z1 703 aaKnown RBP16.36■□□□□ 0.21
APOE-205ENST00000485628 MARK1Q9P0L2 795 aa16.36■□□□□ 0.21
APOE-205ENST00000485628 PRKAG3Q9UGI9 489 aa16.36■□□□□ 0.21
APOE-205ENST00000485628 FAM50BQ9Y247 325 aa16.36■□□□□ 0.21
APOE-205ENST00000485628 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.36■□□□□ 0.21
APOE-205ENST00000485628 COL4A2P08572 1712 aa16.36■□□□□ 0.21
APOE-205ENST00000485628 E9PAM4 449 aa16.35■□□□□ 0.21
APOE-205ENST00000485628 CES2O00748 559 aa16.35■□□□□ 0.21
APOE-205ENST00000485628 SLC9A3R1O14745 358 aaPredicted RBP16.35■□□□□ 0.21
APOE-205ENST00000485628 ZRANB2O95218 330 aaKnown RBP eCLIP16.35■□□□□ 0.21
APOE-205ENST00000485628 PENKP01210 267 aaPredicted RBP16.35■□□□□ 0.21
APOE-205ENST00000485628 SGSHP51688 502 aa16.35■□□□□ 0.21
APOE-205ENST00000485628 CDH6P55285 790 aa16.35■□□□□ 0.21
APOE-205ENST00000485628 PPP2R5EQ16537 467 aa16.35■□□□□ 0.21
APOE-205ENST00000485628 GAB4Q2WGN9 574 aa16.35■□□□□ 0.21
APOE-205ENST00000485628 RFWD3Q6PCD5 774 aa16.35■□□□□ 0.21
APOE-205ENST00000485628 RHBDF2Q6PJF5 856 aa16.35■□□□□ 0.21
APOE-205ENST00000485628 MFSD7Q6UXD7 560 aa16.35■□□□□ 0.21
APOE-205ENST00000485628 UBL4BQ8N7F7 174 aa16.35■□□□□ 0.21
APOE-205ENST00000485628 TDRD5Q8NAT2 981 aaKnown RBP16.35■□□□□ 0.21
APOE-205ENST00000485628 CSPG4P5Q96PW8 444 aa16.35■□□□□ 0.21
APOE-205ENST00000485628 RNF157Q96PX1 679 aa16.35■□□□□ 0.21
APOE-205ENST00000485628 DDX50Q9BQ39 737 aaKnown RBP16.35■□□□□ 0.21
APOE-205ENST00000485628 KLC2Q9H0B6 622 aa16.35■□□□□ 0.21
APOE-205ENST00000485628 SIK2Q9H0K1 926 aa16.35■□□□□ 0.21
APOE-205ENST00000485628 THEGQ9P2T0 379 aa16.35■□□□□ 0.21
APOE-205ENST00000485628 FBXO10Q9UK96 956 aa16.35■□□□□ 0.21
APOE-205ENST00000485628 SNX12Q9UMY4 172 aa16.35■□□□□ 0.21
APOE-205ENST00000485628 NUMBLQ9Y6R0 609 aa16.35■□□□□ 0.21
APOE-205ENST00000485628 COL4A3Q01955 1670 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 OTOL1A6NHN0 477 aaPredicted RBP16.34■□□□□ 0.21
APOE-205ENST00000485628 KIF2AO00139 706 aaPredicted RBP16.34■□□□□ 0.21
APOE-205ENST00000485628 DCLK1O15075 740 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 CHADO15335 359 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 BMP1P13497 986 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 GOT1P17174 413 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 GGCXP38435 758 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 SSR1P43307 286 aaKnown RBP16.34■□□□□ 0.21
APOE-205ENST00000485628 IRAK1P51617 712 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 ZP2Q05996 745 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 MMRN1Q13201 1228 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 FYB2Q5VWT5 728 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 SYT10Q6XYQ8 523 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 SPOCD1Q6ZMY3 1216 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 RFX8Q6ZV50 586 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 MAP7D3Q8IWC1 876 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 ADHFE1Q8IWW8 467 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 RASGEF1CQ8N431 466 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 PQLC3Q8N755 202 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 KCTD6Q8NC69 237 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 PCDH19Q8TAB3 1148 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 ATXN2LQ8WWM7 1075 aaKnown RBP16.34■□□□□ 0.21
APOE-205ENST00000485628 C16orf45Q96MC5 204 aaPredicted RBP16.34■□□□□ 0.21
APOE-205ENST00000485628 NAPGQ99747 312 aaPredicted RBP16.34■□□□□ 0.21
APOE-205ENST00000485628 KXD1Q9BQD3 176 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 HERPUD2Q9BSE4 406 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 PRDM16Q9HAZ2 1276 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 KCNK12Q9HB15 430 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 TRPV5Q9NQA5 729 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 HPS4Q9NQG7 708 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 SPHK2Q9NRA0 654 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 KLHL11Q9NVR0 708 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 IGSF9Q9P2J2 1179 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 TTC7AQ9ULT0 858 aaPredicted RBP16.34■□□□□ 0.21
APOE-205ENST00000485628 WNT6Q9Y6F9 365 aa16.34■□□□□ 0.21
APOE-205ENST00000485628 hCG_1818297A0A087WSY0 165 aa16.33■□□□□ 0.2
APOE-205ENST00000485628 PI4K2BG5E9Z4 385 aa16.33■□□□□ 0.2
APOE-205ENST00000485628 SCAMP3O14828 347 aaKnown RBP16.33■□□□□ 0.2
APOE-205ENST00000485628 ADCY2Q08462 1091 aa16.33■□□□□ 0.2
APOE-205ENST00000485628 KLF1Q13351 362 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms