RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 LTFP02788 710 aa13.79□□□□□ -0.2
UBA3-210ENST00000485424 ATP5BP06576 529 aaKnown RBP13.79□□□□□ -0.2
UBA3-210ENST00000485424 KRT5P13647 590 aa13.79□□□□□ -0.2
UBA3-210ENST00000485424 HOXD9P28356 352 aaPredicted RBP13.79□□□□□ -0.2
UBA3-210ENST00000485424 RRAGAQ7L523 313 aa13.79□□□□□ -0.2
UBA3-210ENST00000485424 BHLHA9Q7RTU4 235 aa13.79□□□□□ -0.2
UBA3-210ENST00000485424 METTL3Q86U44 580 aaKnown RBP13.79□□□□□ -0.2
UBA3-210ENST00000485424 NAXDQ8IW45 347 aa13.79□□□□□ -0.2
UBA3-210ENST00000485424 ZCCHC9Q8N567 271 aaKnown RBP13.79□□□□□ -0.2
UBA3-210ENST00000485424 SORCS1Q8WY21 1168 aa13.79□□□□□ -0.2
UBA3-210ENST00000485424 SNX19Q92543 992 aa13.79□□□□□ -0.2
UBA3-210ENST00000485424 FAM149B1Q96BN6 582 aa13.79□□□□□ -0.2
UBA3-210ENST00000485424 HSFY1Q96LI6 401 aa13.79□□□□□ -0.2
UBA3-210ENST00000485424 NUP58Q9BVL2 599 aa13.79□□□□□ -0.2
UBA3-210ENST00000485424 MIS12Q9H081 205 aa13.79□□□□□ -0.2
UBA3-210ENST00000485424 OCEL1Q9H607 264 aa13.79□□□□□ -0.2
UBA3-210ENST00000485424 ITM2CQ9NQX7 267 aa13.79□□□□□ -0.2
UBA3-210ENST00000485424 WSB2Q9NYS7 404 aaPredicted RBP13.79□□□□□ -0.2
UBA3-210ENST00000485424 GGA2Q9UJY4 613 aa13.79□□□□□ -0.2
UBA3-210ENST00000485424 PCDHB9Q9Y5E1 797 aa13.79□□□□□ -0.2
UBA3-210ENST00000485424 A0A1B0GTW7 788 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 CAPN9O14815 690 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 IRAK2O43187 625 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 SART1O43290 800 aaKnown RBP13.78□□□□□ -0.2
UBA3-210ENST00000485424 MED7O43513 233 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 AFPP02771 609 aaKnown RBP13.78□□□□□ -0.2
UBA3-210ENST00000485424 CAPNS1P04632 268 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 FTH1P19P0C7X4 201 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 PABPC1P11940 636 aaKnown RBP13.78□□□□□ -0.2
UBA3-210ENST00000485424 POLR2EP19388 210 aaKnown RBP13.78□□□□□ -0.2
UBA3-210ENST00000485424 PRKCHP24723 683 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 TPMTP51580 245 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 STX17P56962 302 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 TBX4P57082 545 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 RING1Q06587 406 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 KCNH2Q12809 1159 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 PAK1Q13153 545 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 TRIP6Q15654 476 aaKnown RBP13.78□□□□□ -0.2
UBA3-210ENST00000485424 DCAF12L1Q5VU92 463 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 TTI2Q6NXR4 508 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 PMF1Q6P1K2 205 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 MSANTD2Q6P1R3 559 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 FAM124AQ86V42 546 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 SPNS2Q8IVW8 549 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 UBR7Q8N806 425 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 OR2T3Q8NH03 318 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 CYB5D2Q8WUJ1 264 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 SLC35F5Q8WV83 523 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 DNASE2BQ8WZ79 361 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 TFAP2BQ92481 460 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 SERPINB11Q96P15 392 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 TRIM62Q9BVG3 475 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 ZDHHC5Q9C0B5 715 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 ABCB8Q9NUT2 735 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 CLEC4EQ9ULY5 219 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 NFE2L3Q9Y4A8 694 aa13.78□□□□□ -0.2
UBA3-210ENST00000485424 TAF4O00268 1085 aa13.77□□□□□ -0.21
UBA3-210ENST00000485424 ACSL4O60488 711 aa13.77□□□□□ -0.21
UBA3-210ENST00000485424 DNTTP04053 509 aa13.77□□□□□ -0.21
UBA3-210ENST00000485424 HLA-EP13747 358 aa13.77□□□□□ -0.21
UBA3-210ENST00000485424 HLA-FP30511 346 aa13.77□□□□□ -0.21
UBA3-210ENST00000485424 ACADSBP45954 432 aa13.77□□□□□ -0.21
UBA3-210ENST00000485424 COPAP53621 1224 aa13.77□□□□□ -0.21
UBA3-210ENST00000485424 ST8SIA6P61647 398 aa13.77□□□□□ -0.21
UBA3-210ENST00000485424 GCNT1Q02742 428 aa13.77□□□□□ -0.21
UBA3-210ENST00000485424 COL9A2Q14055 689 aaPredicted RBP13.77□□□□□ -0.21
UBA3-210ENST00000485424 PKDCCQ504Y2 493 aa13.77□□□□□ -0.21
UBA3-210ENST00000485424 PROSER1Q86XN7 944 aa13.77□□□□□ -0.21
UBA3-210ENST00000485424 ARHGEF19Q8IW93 802 aa13.77□□□□□ -0.21
UBA3-210ENST00000485424 MFN1Q8IWA4 741 aa13.77□□□□□ -0.21
UBA3-210ENST00000485424 HJURPQ8NCD3 748 aaPredicted RBP13.77□□□□□ -0.21
UBA3-210ENST00000485424 EHBP1Q8NDI1 1231 aa13.77□□□□□ -0.21
UBA3-210ENST00000485424 CADM4Q8NFZ8 388 aa13.77□□□□□ -0.21
UBA3-210ENST00000485424 ADAMTS14Q8WXS8 1223 aa13.77□□□□□ -0.21
UBA3-210ENST00000485424 KAT5Q92993 513 aa13.77□□□□□ -0.21
UBA3-210ENST00000485424 SRRTQ9BXP5 876 aaKnown RBP13.77□□□□□ -0.21
UBA3-210ENST00000485424 IRX2Q9BZI1 471 aaPredicted RBP13.77□□□□□ -0.21
UBA3-210ENST00000485424 LHX5Q9H2C1 402 aa13.77□□□□□ -0.21
UBA3-210ENST00000485424 FBRSQ9HAH7 460 aa13.77□□□□□ -0.21
UBA3-210ENST00000485424 STIM2Q9P246 746 aa13.77□□□□□ -0.21
UBA3-210ENST00000485424 SUN2Q9UH99 717 aa13.77□□□□□ -0.21
UBA3-210ENST00000485424 STOML2Q9UJZ1 356 aa13.77□□□□□ -0.21
UBA3-210ENST00000485424 LHX6Q9UPM6 363 aa13.77□□□□□ -0.21
UBA3-210ENST00000485424 PPP1R3GB7ZBB8 358 aa13.76□□□□□ -0.21
UBA3-210ENST00000485424 RNF225M0QZC1 329 aaPredicted RBP13.76□□□□□ -0.21
UBA3-210ENST00000485424 SNPHO15079 494 aa13.76□□□□□ -0.21
UBA3-210ENST00000485424 CBFA2T3O75081 653 aa13.76□□□□□ -0.21
UBA3-210ENST00000485424 MOCS3O95396 460 aa13.76□□□□□ -0.21
UBA3-210ENST00000485424 IGLV3-19P01714 112 aa13.76□□□□□ -0.21
UBA3-210ENST00000485424 APOEP02649 317 aa13.76□□□□□ -0.21
UBA3-210ENST00000485424 CDH18Q13634 790 aa13.76□□□□□ -0.21
UBA3-210ENST00000485424 MORC3Q14149 939 aa13.76□□□□□ -0.21
UBA3-210ENST00000485424 TTC31Q49AM3 519 aaPredicted RBP13.76□□□□□ -0.21
UBA3-210ENST00000485424 MPP7Q5T2T1 576 aa13.76□□□□□ -0.21
UBA3-210ENST00000485424 TMEM215Q68D42 235 aa13.76□□□□□ -0.21
UBA3-210ENST00000485424 MBLAC2Q68D91 279 aa13.76□□□□□ -0.21
UBA3-210ENST00000485424 RFWD3Q6PCD5 774 aa13.76□□□□□ -0.21
UBA3-210ENST00000485424 FOXR2Q6PJQ5 311 aa13.76□□□□□ -0.21
UBA3-210ENST00000485424 CARNMT1Q8N4J0 409 aa13.76□□□□□ -0.21
UBA3-210ENST00000485424 PNPLA1Q8N8W4 532 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms