RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 MYEOVQ96EZ4 313 aa20■□□□□ 0.79
COL27A1-205ENST00000485397 HSFY1Q96LI6 401 aa20■□□□□ 0.79
COL27A1-205ENST00000485397 HOOK1Q9UJC3 728 aaKnown RBP20■□□□□ 0.79
COL27A1-205ENST00000485397 MUC22E2RYF6 1773 aaPredicted RBP19.99■□□□□ 0.79
COL27A1-205ENST00000485397 FYNP06241 537 aa19.99■□□□□ 0.79
COL27A1-205ENST00000485397 ATP5BP06576 529 aaKnown RBP19.99■□□□□ 0.79
COL27A1-205ENST00000485397 C7P10643 843 aa19.99■□□□□ 0.79
COL27A1-205ENST00000485397 POLR2EP19388 210 aaKnown RBP19.99■□□□□ 0.79
COL27A1-205ENST00000485397 MATKP42679 507 aa19.99■□□□□ 0.79
COL27A1-205ENST00000485397 CSNK1EP49674 416 aaKnown RBP19.99■□□□□ 0.79
COL27A1-205ENST00000485397 STILQ15468 1287 aa19.99■□□□□ 0.79
COL27A1-205ENST00000485397 MPP7Q5T2T1 576 aa19.99■□□□□ 0.79
COL27A1-205ENST00000485397 ADAMTS14Q8WXS8 1223 aa19.99■□□□□ 0.79
COL27A1-205ENST00000485397 GOLGA1Q92805 767 aa19.99■□□□□ 0.79
COL27A1-205ENST00000485397 LMLNQ96KR4 655 aa19.99■□□□□ 0.79
COL27A1-205ENST00000485397 FCRL2Q96LA5 508 aaPredicted RBP19.99■□□□□ 0.79
COL27A1-205ENST00000485397 PRICKLE1Q96MT3 831 aaPredicted RBP19.99■□□□□ 0.79
COL27A1-205ENST00000485397 PCED1AQ9H1Q7 454 aa19.99■□□□□ 0.79
COL27A1-205ENST00000485397 TM7SF3Q9NS93 570 aa19.99■□□□□ 0.79
COL27A1-205ENST00000485397 PCOLCE2Q9UKZ9 415 aa19.99■□□□□ 0.79
COL27A1-205ENST00000485397 PPP1R3GB7ZBB8 358 aa19.98■□□□□ 0.79
COL27A1-205ENST00000485397 P4HA2O15460 535 aa19.98■□□□□ 0.79
COL27A1-205ENST00000485397 IRAK2O43187 625 aa19.98■□□□□ 0.79
COL27A1-205ENST00000485397 FBXO21O94952 628 aa19.98■□□□□ 0.79
COL27A1-205ENST00000485397 CER1O95813 267 aa19.98■□□□□ 0.79
COL27A1-205ENST00000485397 BMP6P22004 513 aa19.98■□□□□ 0.79
COL27A1-205ENST00000485397 RPS24P62847 133 aaKnown RBP19.98■□□□□ 0.79
COL27A1-205ENST00000485397 RING1Q06587 406 aa19.98■□□□□ 0.79
COL27A1-205ENST00000485397 CETN1Q12798 172 aa19.98■□□□□ 0.79
COL27A1-205ENST00000485397 IL27RAQ6UWB1 636 aa19.98■□□□□ 0.79
COL27A1-205ENST00000485397 SLCO6A1Q86UG4 719 aa19.98■□□□□ 0.79
COL27A1-205ENST00000485397 MFN1Q8IWA4 741 aa19.98■□□□□ 0.79
COL27A1-205ENST00000485397 EHBP1Q8NDI1 1231 aa19.98■□□□□ 0.79
COL27A1-205ENST00000485397 DQX1Q8TE96 717 aaKnown RBP19.98■□□□□ 0.79
COL27A1-205ENST00000485397 NELFBQ8WX92 580 aa19.98■□□□□ 0.79
COL27A1-205ENST00000485397 AZIN2Q96A70 460 aa19.98■□□□□ 0.79
COL27A1-205ENST00000485397 KREMEN1Q96MU8 473 aa19.98■□□□□ 0.79
COL27A1-205ENST00000485397 IRX2Q9BZI1 471 aaPredicted RBP19.98■□□□□ 0.79
COL27A1-205ENST00000485397 BTBD1Q9H0C5 482 aa19.98■□□□□ 0.79
COL27A1-205ENST00000485397 SUN2Q9UH99 717 aa19.98■□□□□ 0.79
COL27A1-205ENST00000485397 NAALADL1Q9UQQ1 740 aa19.98■□□□□ 0.79
COL27A1-205ENST00000485397 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.98■□□□□ 0.79
COL27A1-205ENST00000485397 AKAP13Q12802 2813 aa19.97■□□□□ 0.79
COL27A1-205ENST00000485397 SEMA4FO95754 770 aa19.97■□□□□ 0.79
COL27A1-205ENST00000485397 DNTTP04053 509 aa19.97■□□□□ 0.79
COL27A1-205ENST00000485397 ZNF883P0CG24 379 aa19.97■□□□□ 0.79
COL27A1-205ENST00000485397 ZBTB16Q05516 673 aa19.97■□□□□ 0.79
COL27A1-205ENST00000485397 KIF19Q2TAC6 998 aa19.97■□□□□ 0.79
COL27A1-205ENST00000485397 SCUBE3Q8IX30 993 aa19.97■□□□□ 0.79
COL27A1-205ENST00000485397 HJURPQ8NCD3 748 aaPredicted RBP19.97■□□□□ 0.79
COL27A1-205ENST00000485397 FIBINQ8TAL6 211 aa19.97■□□□□ 0.79
COL27A1-205ENST00000485397 ADAM32Q8TC27 787 aa19.97■□□□□ 0.79
COL27A1-205ENST00000485397 BIRC7Q96CA5 298 aa19.97■□□□□ 0.79
COL27A1-205ENST00000485397 MYO19Q96H55 970 aa19.97■□□□□ 0.79
COL27A1-205ENST00000485397 NUCKS1Q9H1E3 243 aaKnown RBP19.97■□□□□ 0.79
COL27A1-205ENST00000485397 FBRSQ9HAH7 460 aa19.97■□□□□ 0.79
COL27A1-205ENST00000485397 INTS6Q9UL03 887 aaKnown RBP19.97■□□□□ 0.79
COL27A1-205ENST00000485397 CTNND2Q9UQB3 1225 aa19.97■□□□□ 0.79
COL27A1-205ENST00000485397 KNL1Q8NG31 2342 aa19.96■□□□□ 0.79
COL27A1-205ENST00000485397 TAF4O00268 1085 aa19.96■□□□□ 0.79
COL27A1-205ENST00000485397 FSBPO95073 299 aa19.96■□□□□ 0.79
COL27A1-205ENST00000485397 PPP1R2P41236 205 aa19.96■□□□□ 0.79
COL27A1-205ENST00000485397 GPD2P43304 727 aa19.96■□□□□ 0.79
COL27A1-205ENST00000485397 AFF3P51826 1226 aaKnown RBP19.96■□□□□ 0.79
COL27A1-205ENST00000485397 STX17P56962 302 aa19.96■□□□□ 0.79
COL27A1-205ENST00000485397 NUCB2P80303 420 aa19.96■□□□□ 0.79
COL27A1-205ENST00000485397 GCNT1Q02742 428 aa19.96■□□□□ 0.79
COL27A1-205ENST00000485397 KCNH2Q12809 1159 aa19.96■□□□□ 0.79
COL27A1-205ENST00000485397 ZNF776Q68DI1 518 aaPredicted RBP19.96■□□□□ 0.79
COL27A1-205ENST00000485397 DENND1BQ6P3S1 775 aa19.96■□□□□ 0.79
COL27A1-205ENST00000485397 LAYNQ6UX15 382 aa19.96■□□□□ 0.79
COL27A1-205ENST00000485397 MMS22LQ6ZRQ5 1243 aa19.96■□□□□ 0.79
COL27A1-205ENST00000485397 ELOA2Q8IYF1 753 aaPredicted RBP19.96■□□□□ 0.79
COL27A1-205ENST00000485397 CFAP52Q8N1V2 620 aa19.96■□□□□ 0.79
COL27A1-205ENST00000485397 CARNMT1Q8N4J0 409 aa19.96■□□□□ 0.79
COL27A1-205ENST00000485397 TTC17Q96AE7 1141 aa19.96■□□□□ 0.79
COL27A1-205ENST00000485397 FAM149B1Q96BN6 582 aa19.96■□□□□ 0.79
COL27A1-205ENST00000485397 SLC39A13Q96H72 371 aa19.96■□□□□ 0.79
COL27A1-205ENST00000485397 SERPINB11Q96P15 392 aa19.96■□□□□ 0.79
COL27A1-205ENST00000485397 TM9SF3Q9HD45 589 aa19.96■□□□□ 0.79
COL27A1-205ENST00000485397 ST7Q9NRC1 585 aa19.96■□□□□ 0.79
COL27A1-205ENST00000485397 APOBEC2Q9Y235 224 aaKnown RBP19.96■□□□□ 0.79
COL27A1-205ENST00000485397 SNX11Q9Y5W9 270 aa19.96■□□□□ 0.79
COL27A1-205ENST00000485397 BIN1O00499 593 aa19.95■□□□□ 0.78
COL27A1-205ENST00000485397 KCNK3O14649 394 aa19.95■□□□□ 0.78
COL27A1-205ENST00000485397 SIN3BO75182 1162 aa19.95■□□□□ 0.78
COL27A1-205ENST00000485397 MOCS2O96007 188 aaPredicted RBP19.95■□□□□ 0.78
COL27A1-205ENST00000485397 CSKP41240 450 aa19.95■□□□□ 0.78
COL27A1-205ENST00000485397 RPL34P49207 117 aaKnown RBP19.95■□□□□ 0.78
COL27A1-205ENST00000485397 TTC31Q49AM3 519 aaPredicted RBP19.95■□□□□ 0.78
COL27A1-205ENST00000485397 FSCBQ5H9T9 825 aa19.95■□□□□ 0.78
COL27A1-205ENST00000485397 MS4A13Q5J8X5 152 aa19.95■□□□□ 0.78
COL27A1-205ENST00000485397 SYPL2Q5VXT5 272 aa19.95■□□□□ 0.78
COL27A1-205ENST00000485397 DBX2Q6ZNG2 339 aa19.95■□□□□ 0.78
COL27A1-205ENST00000485397 GLRX5Q86SX6 157 aa19.95■□□□□ 0.78
COL27A1-205ENST00000485397 TAC4Q86UU9 113 aa19.95■□□□□ 0.78
COL27A1-205ENST00000485397 TRIM59Q8IWR1 403 aa19.95■□□□□ 0.78
COL27A1-205ENST00000485397 ZNF557Q8N988 423 aaPredicted RBP19.95■□□□□ 0.78
COL27A1-205ENST00000485397 MRGPRX3Q96LB0 322 aa19.95■□□□□ 0.78
COL27A1-205ENST00000485397 DDX50Q9BQ39 737 aaKnown RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms