RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 EGR3Q06889 387 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 SPAG1Q07617 926 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 RTP5Q14D33 572 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 SF3A1Q15459 793 aaKnown RBP5.73□□□□□ -1.49
PTPN4-210ENST00000485247 SDHAF4Q5VUM1 108 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 MOXD1Q6UVY6 613 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 IL27RAQ6UWB1 636 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 ERICH1Q86X53 443 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 SMC5Q8IY18 1101 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 ARL14EPQ8N8R7 260 aaPredicted RBP5.73□□□□□ -1.49
PTPN4-210ENST00000485247 ENGASEQ8NFI3 743 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 OR10T2Q8NGX3 314 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 SH3RF2Q8TEC5 729 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 LRRC15Q8TF66 581 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 HAS1Q92839 578 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 EIF2AK1Q9BQI3 630 aaKnown RBP5.73□□□□□ -1.49
PTPN4-210ENST00000485247 SLC6A17Q9H1V8 727 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 CDT1Q9H211 546 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 POLD4Q9HCU8 107 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 ARHGEF4Q9NR80 690 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 HSFX1Q9UBD0 423 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 PCDHGB2Q9Y5G2 931 aa5.73□□□□□ -1.49
PTPN4-210ENST00000485247 TRAV19A0A0A6YYK7 116 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 TBC1D3BA6NDS4 549 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 CBX4O00257 560 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 KCNK3O14649 394 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 SCAMP3O14828 347 aaKnown RBP5.72□□□□□ -1.49
PTPN4-210ENST00000485247 TADA3O75528 432 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 LYPLA2O95372 231 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 HPXP02790 462 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 ZGLP1P0C6A0 271 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 HAPLN1P10915 354 aaPredicted RBP5.72□□□□□ -1.49
PTPN4-210ENST00000485247 HARSP12081 509 aaKnown RBP5.72□□□□□ -1.49
PTPN4-210ENST00000485247 TNFSF9P41273 254 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 GRIA2P42262 883 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 GRK6P43250 576 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 CSNK1EP49674 416 aaKnown RBP5.72□□□□□ -1.49
PTPN4-210ENST00000485247 GPR15P49685 360 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 UCNP55089 124 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 NFKB2Q00653 900 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 NUCB1Q02818 461 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 RESTQ13127 1097 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 KIF19Q2TAC6 998 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 TBC1D25Q3MII6 688 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 ZNF568Q3ZCX4 644 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 SEZ6Q53EL9 994 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 HES3Q5TGS1 186 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 KIAA1614Q5VZ46 1190 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 CREB3L3Q68CJ9 461 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 ADGRG2Q8IZP9 1017 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 BLIDQ8IZY5 108 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 ZNF248Q8NDW4 579 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 MCPH1Q8NEM0 835 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 DNASE2BQ8WZ79 361 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 CCDC120Q96HB5 630 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 HSD17B14Q9BPX1 270 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 TCHPQ9BT92 498 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.72□□□□□ -1.49
PTPN4-210ENST00000485247 GPR174Q9BXC1 333 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 SLC26A6Q9BXS9 759 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 ZCWPW1Q9H0M4 648 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 FTSJ1Q9UET6 329 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 TNFSF13BQ9Y275 285 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 SPTAN1Q13813 2472 aaKnown RBP5.72□□□□□ -1.49
PTPN4-210ENST00000485247 ANKRD17O75179 2603 aaKnown RBP5.72□□□□□ -1.49
PTPN4-210ENST00000485247 STK36Q9NRP7 1315 aa5.72□□□□□ -1.49
PTPN4-210ENST00000485247 A0A1W2PQF6 199 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 C2orf78A6NCI8 922 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 K7ERI5 159 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 KLK10O43240 276 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 CCNT1O60563 726 aaKnown RBP5.71□□□□□ -1.5
PTPN4-210ENST00000485247 RFPL3O75679 317 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 CSH1P0DML2 217 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 CSH2P0DML3 217 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 NCAM1P13591 858 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 HDCP19113 662 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 TYMPP19971 482 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 CR2P20023 1033 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 CD6P30203 668 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 NTSR1P30989 418 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 TRHRP34981 398 aaPredicted RBP5.71□□□□□ -1.5
PTPN4-210ENST00000485247 TNFRSF4P43489 277 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 NAMPTP43490 491 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 AARSP49588 968 aaKnown RBP eCLIP5.71□□□□□ -1.5
PTPN4-210ENST00000485247 GUCY2FP51841 1108 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 EFNA5P52803 228 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 ZXDBP98169 803 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 ATP2C1P98194 919 aaPredicted RBP5.71□□□□□ -1.5
PTPN4-210ENST00000485247 IL9RQ01113 521 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 EXOSC10Q01780 885 aaKnown RBP5.71□□□□□ -1.5
PTPN4-210ENST00000485247 DNAJC3Q13217 504 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 KCNB1Q14721 858 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 DHCR24Q15392 516 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 SLC10A6Q3KNW5 377 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 TTC22Q5TAA0 569 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 DCAF12L1Q5VU92 463 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 CDCP2Q5VXM1 449 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 HIST2H2BCQ6DN03 193 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 KIAA1324Q6UXG2 1013 aaKnown RBP5.71□□□□□ -1.5
PTPN4-210ENST00000485247 ATG14Q6ZNE5 492 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms