RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 COMMD8Q9NX08 183 aa8.97□□□□□ -0.97
DDX39B-221ENST00000484566 TBC1D7Q9P0N9 293 aa8.97□□□□□ -0.97
DDX39B-221ENST00000484566 ANKRD6Q9Y2G4 727 aa8.97□□□□□ -0.97
DDX39B-221ENST00000484566 PCDHGA1Q9Y5H4 931 aa8.97□□□□□ -0.97
DDX39B-221ENST00000484566 SNX11Q9Y5W9 270 aa8.97□□□□□ -0.97
DDX39B-221ENST00000484566 FAM181BA6NEQ2 426 aa8.96□□□□□ -0.98
DDX39B-221ENST00000484566 ZNF233A6NK53 670 aa8.96□□□□□ -0.98
DDX39B-221ENST00000484566 CLDN5O00501 218 aa8.96□□□□□ -0.98
DDX39B-221ENST00000484566 TLX3O43711 291 aaPredicted RBP8.96□□□□□ -0.98
DDX39B-221ENST00000484566 DFNA5O60443 496 aa8.96□□□□□ -0.98
DDX39B-221ENST00000484566 RFPL3O75679 317 aa8.96□□□□□ -0.98
DDX39B-221ENST00000484566 BMP15O95972 392 aa8.96□□□□□ -0.98
DDX39B-221ENST00000484566 IGLV3-19P01714 112 aa8.96□□□□□ -0.98
DDX39B-221ENST00000484566 FAM163BP0C2L3 166 aa8.96□□□□□ -0.98
DDX39B-221ENST00000484566 ZDHHC11BP0C7U3 371 aa8.96□□□□□ -0.98
DDX39B-221ENST00000484566 POU3F2P20265 443 aaPredicted RBP8.96□□□□□ -0.98
DDX39B-221ENST00000484566 LONP1P36776 959 aaKnown RBP8.96□□□□□ -0.98
DDX39B-221ENST00000484566 CXADRP78310 365 aa8.96□□□□□ -0.98
DDX39B-221ENST00000484566 ARID5AQ03989 594 aa8.96□□□□□ -0.98
DDX39B-221ENST00000484566 LCE2CQ5TA81 110 aa8.96□□□□□ -0.98
DDX39B-221ENST00000484566 FAM124AQ86V42 546 aa8.96□□□□□ -0.98
DDX39B-221ENST00000484566 NLRP8Q86W28 1048 aa8.96□□□□□ -0.98
DDX39B-221ENST00000484566 SCAMP5Q8TAC9 235 aa8.96□□□□□ -0.98
DDX39B-221ENST00000484566 SCG3Q8WXD2 468 aaKnown RBP8.96□□□□□ -0.98
DDX39B-221ENST00000484566 WBP2Q969T9 261 aa8.96□□□□□ -0.98
DDX39B-221ENST00000484566 SMARCD1Q96GM5 515 aa8.96□□□□□ -0.98
DDX39B-221ENST00000484566 STRA6Q9BX79 667 aa8.96□□□□□ -0.98
DDX39B-221ENST00000484566 B3GNT5Q9BYG0 378 aa8.96□□□□□ -0.98
DDX39B-221ENST00000484566 TRIM9Q9C026 710 aa8.96□□□□□ -0.98
DDX39B-221ENST00000484566 NRSN2Q9GZP1 204 aa8.96□□□□□ -0.98
DDX39B-221ENST00000484566 FBXO44Q9H4M3 255 aa8.96□□□□□ -0.98
DDX39B-221ENST00000484566 OSGEPQ9NPF4 335 aa8.96□□□□□ -0.98
DDX39B-221ENST00000484566 TLR8Q9NR97 1041 aaKnown RBP8.96□□□□□ -0.98
DDX39B-221ENST00000484566 KRT82Q9NSB4 513 aa8.96□□□□□ -0.98
DDX39B-221ENST00000484566 PPP4R2Q9NY27 417 aa8.96□□□□□ -0.98
DDX39B-221ENST00000484566 THAP10Q9P2Z0 257 aaPredicted RBP8.96□□□□□ -0.98
DDX39B-221ENST00000484566 NOVA2Q9UNW9 492 aaKnown RBP8.96□□□□□ -0.98
DDX39B-221ENST00000484566 USP3Q9Y6I4 520 aa8.96□□□□□ -0.98
DDX39B-221ENST00000484566 USP9YO00507 2555 aaPredicted RBP8.96□□□□□ -0.98
DDX39B-221ENST00000484566 LRRK2Q5S007 2527 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 H0Y8X5 98 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 H3BQV1 296 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 ENC1O14682 589 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 SLC28A2O43868 658 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 EPHX1P07099 455 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 C1SP09871 688 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 CISD3P0C7P0 127 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 IDEP14735 1019 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 ATP5C1P36542 298 aaKnown RBP8.95□□□□□ -0.98
DDX39B-221ENST00000484566 BCAT1P54687 386 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 MFAP3P55082 362 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 C21orf59P57076 290 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 IL9RQ01113 521 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 TRPC3Q13507 836 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 SERINC3Q13530 473 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 ELOAQ14241 798 aaKnown RBP8.95□□□□□ -0.98
DDX39B-221ENST00000484566 EIF4HQ15056 248 aaKnown RBP8.95□□□□□ -0.98
DDX39B-221ENST00000484566 KRTAP21-3Q3LHN1 58 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 WDR72Q3MJ13 1102 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 SERPINA13PQ6UXR4 307 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 TRAPPC11Q7Z392 1133 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 ANKS1BQ7Z6G8 1248 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 FGF11Q92914 225 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 CNDP2Q96KP4 475 aaKnown RBP8.95□□□□□ -0.98
DDX39B-221ENST00000484566 NAP1L5Q96NT1 182 aaPredicted RBP8.95□□□□□ -0.98
DDX39B-221ENST00000484566 KCNK16Q96T55 309 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 ARID3AQ99856 593 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 CIPCQ9C0C6 399 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 LHX5Q9H2C1 402 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 TM9SF3Q9HD45 589 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 OLFML3Q9NRN5 406 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 PLK2Q9NYY3 685 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 STK17AQ9UEE5 414 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 CCDC39Q9UFE4 941 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 SLC27A6Q9Y2P4 619 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.95□□□□□ -0.98
DDX39B-221ENST00000484566 NME7Q9Y5B8 376 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 MYLKQ15746 1914 aa8.95□□□□□ -0.98
DDX39B-221ENST00000484566 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.94□□□□□ -0.98
DDX39B-221ENST00000484566 A0A1W2PNR3 127 aa8.94□□□□□ -0.98
DDX39B-221ENST00000484566 FAM92AA1XBS5 289 aa8.94□□□□□ -0.98
DDX39B-221ENST00000484566 PAPSS1O43252 624 aaPredicted RBP8.94□□□□□ -0.98
DDX39B-221ENST00000484566 GREM1O60565 184 aa8.94□□□□□ -0.98
DDX39B-221ENST00000484566 LDOC1O95751 146 aaPredicted RBP8.94□□□□□ -0.98
DDX39B-221ENST00000484566 SEMA4FO95754 770 aa8.94□□□□□ -0.98
DDX39B-221ENST00000484566 TBX18O95935 607 aa8.94□□□□□ -0.98
DDX39B-221ENST00000484566 DLATP10515 647 aaKnown RBP8.94□□□□□ -0.98
DDX39B-221ENST00000484566 TNNI1P19237 187 aa8.94□□□□□ -0.98
DDX39B-221ENST00000484566 ACO1P21399 889 aaKnown RBP8.94□□□□□ -0.98
DDX39B-221ENST00000484566 ABCB4P21439 1286 aa8.94□□□□□ -0.98
DDX39B-221ENST00000484566 CD27P26842 260 aa8.94□□□□□ -0.98
DDX39B-221ENST00000484566 ACTN2P35609 894 aa8.94□□□□□ -0.98
DDX39B-221ENST00000484566 TXLNAP40222 546 aa8.94□□□□□ -0.98
DDX39B-221ENST00000484566 CASP5P51878 434 aa8.94□□□□□ -0.98
DDX39B-221ENST00000484566 COPAP53621 1224 aa8.94□□□□□ -0.98
DDX39B-221ENST00000484566 TLE3Q04726 772 aa8.94□□□□□ -0.98
DDX39B-221ENST00000484566 CCDC173Q0VFZ6 552 aa8.94□□□□□ -0.98
DDX39B-221ENST00000484566 TARDBPQ13148 414 aaKnown RBP eCLIP8.94□□□□□ -0.98
DDX39B-221ENST00000484566 ENPP2Q13822 863 aa8.94□□□□□ -0.98
DDX39B-221ENST00000484566 ZNF234Q14588 700 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms