RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 NUDT5Q9UKK9 219 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 MAFFQ9ULX9 164 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 ASB3Q9Y575 518 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 WNT6Q9Y6F9 365 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 ZFP37Q9Y6Q3 630 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-216ENST00000484087 CFAP54Q96N23 3096 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 CACNA1IQ9P0X4 2223 aa7.21□□□□□ -1.26
BRCA1-216ENST00000484087 PIK3R2O00459 728 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 MDM4O15151 490 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 TJP3O95049 919 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 GAS8O95995 478 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 CKMP06732 381 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 GLI1P08151 1106 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 KRT7P08729 469 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 CD46P15529 392 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 CDC25CP30307 473 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 GJC1P36383 396 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 ABL2P42684 1182 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 GPD2P43304 727 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 MAGEA11P43364 429 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 ACADSBP45954 432 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 GABRB2P47870 512 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 FNTAP49354 379 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 COPS2P61201 443 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 RPL7AP62424 266 aaKnown RBP7.2□□□□□ -1.26
BRCA1-216ENST00000484087 MRPS25P82663 173 aaKnown RBP7.2□□□□□ -1.26
BRCA1-216ENST00000484087 NHLH1Q02575 133 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 PDCLQ13371 301 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 GOLGA7BQ2TAP0 167 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 ARHGAP15Q53QZ3 475 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 FAM102AQ5T9C2 384 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-216ENST00000484087 ARHGAP17Q68EM7 881 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 OR6B2Q6IFH4 312 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 CCDC137Q6PK04 289 aaKnown RBP7.2□□□□□ -1.26
BRCA1-216ENST00000484087 TSSK4Q6SA08 328 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 CLEC20AQ6ZU45 233 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 POLNQ7Z5Q5 900 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 PACS2Q86VP3 889 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 WDTC1Q8N5D0 677 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 LEMD2Q8NC56 503 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 PJA1Q8NG27 643 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 UBA3Q8TBC4 463 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 SPATA18Q8TC71 538 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 AENQ8WTP8 325 aaKnown RBP7.2□□□□□ -1.26
BRCA1-216ENST00000484087 NDRG1Q92597 394 aaKnown RBP7.2□□□□□ -1.26
BRCA1-216ENST00000484087 CAVIN3Q969G5 261 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 FBXO32Q969P5 355 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 LRRC45Q96CN5 670 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 TRIM7Q9C029 511 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 RNF38Q9H0F5 515 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 EBF3Q9H4W6 596 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 CCSER2Q9H7U1 834 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 MED4Q9NPJ6 270 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 HPS4Q9NQG7 708 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 METTL5Q9NRN9 209 aaKnown RBP7.2□□□□□ -1.26
BRCA1-216ENST00000484087 POLR3BQ9NW08 1133 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-216ENST00000484087 ASNSD1Q9NWL6 643 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 C2orf42Q9NWW7 574 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 WNT16Q9UBV4 365 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 PCYOX1Q9UHG3 505 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 PIAS3Q9Y6X2 628 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 F5P12259 2224 aa7.2□□□□□ -1.26
BRCA1-216ENST00000484087 TCRBV5S1A1TA0A578 114 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 HHLA1C9JL84 531 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 TNFRSF10BO14763 440 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 TTI1O43156 1089 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 HSF2BPO75031 334 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 SASH3O75995 380 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 ECEL1O95672 775 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 KRT1P04264 644 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 IRF1P10914 325 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 GPD1P21695 349 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 AVPR1AP37288 418 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 CARSP49589 748 aaKnown RBP7.19□□□□□ -1.26
BRCA1-216ENST00000484087 BCAT1P54687 386 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 CBX1P83916 185 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 LMNB2Q03252 620 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 FCHO2Q0JRZ9 810 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 BST2Q10589 180 aaKnown RBP7.19□□□□□ -1.26
BRCA1-216ENST00000484087 SMARCB1Q12824 385 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 PPP1R7Q15435 360 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 CYP1B1Q16678 543 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 VSTM1Q6UX27 236 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 Q6ZS52 159 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 SYDE1Q6ZW31 735 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-216ENST00000484087 TTC30AQ86WT1 665 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 XYLT1Q86Y38 959 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 MFSD6LQ8IWD5 586 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 YAF2Q8IY57 180 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 GSPT2Q8IYD1 628 aaKnown RBP7.19□□□□□ -1.26
BRCA1-216ENST00000484087 CRYBG2Q8N1P7 616 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 C12orf50Q8NA57 414 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-216ENST00000484087 BPIFB1Q8TDL5 484 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 STK32AQ8WU08 396 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 CASKIN2Q8WXE0 1202 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 MRPS31Q92665 395 aaKnown RBP7.19□□□□□ -1.26
BRCA1-216ENST00000484087 NXPE3Q969Y0 559 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 TRMT2BQ96GJ1 504 aaKnown RBP7.19□□□□□ -1.26
BRCA1-216ENST00000484087 SMARCD1Q96GM5 515 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 PKNOX2Q96KN3 472 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms