RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 GZMAP12544 262 aa27.42■■□□□ 1.98
GTF3C4-202ENST00000483873 HLA-FP30511 346 aa27.42■■□□□ 1.98
GTF3C4-202ENST00000483873 TRIM14Q14142 442 aa27.42■■□□□ 1.98
GTF3C4-202ENST00000483873 DMC1Q14565 340 aa27.42■■□□□ 1.98
GTF3C4-202ENST00000483873 BRMS1LQ5PSV4 323 aa27.42■■□□□ 1.98
GTF3C4-202ENST00000483873 PPP1R15BQ5SWA1 713 aa27.42■■□□□ 1.98
GTF3C4-202ENST00000483873 WDR59Q6PJI9 974 aa27.42■■□□□ 1.98
GTF3C4-202ENST00000483873 NUDT18Q6ZVK8 323 aa27.42■■□□□ 1.98
GTF3C4-202ENST00000483873 SND1Q7KZF4 910 aaKnown RBP eCLIP27.42■■□□□ 1.98
GTF3C4-202ENST00000483873 SYT13Q7L8C5 426 aa27.42■■□□□ 1.98
GTF3C4-202ENST00000483873 ZNF513Q8N8E2 541 aaPredicted RBP27.42■■□□□ 1.98
GTF3C4-202ENST00000483873 TXNDC5Q8NBS9 432 aaKnown RBP27.42■■□□□ 1.98
GTF3C4-202ENST00000483873 MCEEQ96PE7 176 aa27.42■■□□□ 1.98
GTF3C4-202ENST00000483873 HHIPQ96QV1 700 aa27.42■■□□□ 1.98
GTF3C4-202ENST00000483873 ARHGAP20Q9P2F6 1191 aa27.42■■□□□ 1.98
GTF3C4-202ENST00000483873 ADAMTS1Q9UHI8 967 aa27.42■■□□□ 1.98
GTF3C4-202ENST00000483873 MMP17Q9ULZ9 603 aa27.42■■□□□ 1.98
GTF3C4-202ENST00000483873 HS3ST4Q9Y661 456 aa27.42■■□□□ 1.98
GTF3C4-202ENST00000483873 BZW2Q9Y6E2 419 aaKnown RBP27.42■■□□□ 1.98
GTF3C4-202ENST00000483873 GOLGA6L3A6NEY3 463 aa27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 F5H5T6 163 aa27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 SGK1O00141 431 aa27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 F9P00740 461 aa27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 FTLP02792 175 aaPredicted RBP27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 SDC4P31431 198 aa27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 RDXP35241 583 aaKnown RBP27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 RPL7AP62424 266 aaKnown RBP27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 MPP7Q5T2T1 576 aa27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 PPP1R2P3Q6NXS1 205 aa27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 ANKS1BQ7Z6G8 1248 aa27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 ALYREFQ86V81 257 aaKnown RBP27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 CIR1Q86X95 450 aaPredicted RBP27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 FAM131BQ86XD5 332 aa27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 NELL1Q92832 810 aa27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 VCPIP1Q96JH7 1222 aa27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 SLC8A2Q9UPR5 921 aa27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 STARD13Q9Y3M8 1113 aa27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 SNX10Q9Y5X0 201 aa27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 RTN2O75298 545 aa27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 ENDOD1O94919 500 aa27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 GPD1P21695 349 aa27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 PTPN9P43378 593 aa27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 PXNP49023 591 aaPredicted RBP27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 TMEM215Q68D42 235 aa27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 HEATR6Q6AI08 1181 aaKnown RBP27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 C14orf80Q86SX3 495 aa27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 MRFAP1L1Q96HT8 127 aa27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 ACOX2Q99424 681 aa27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 SIK2Q9H0K1 926 aa27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 GRPEL1Q9HAV7 217 aa27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 ABCB8Q9NUT2 735 aa27.41■■□□□ 1.98
GTF3C4-202ENST00000483873 MUC22E2RYF6 1773 aaPredicted RBP27.4■■□□□ 1.98
GTF3C4-202ENST00000483873 TYW5A2RUC4 315 aaKnown RBP27.4■■□□□ 1.98
GTF3C4-202ENST00000483873 ADAM23O75077 832 aa27.4■■□□□ 1.98
GTF3C4-202ENST00000483873 HNRNPLP14866 589 aaKnown RBP eCLIP27.4■■□□□ 1.98
GTF3C4-202ENST00000483873 HNRNPH3P31942 346 aaKnown RBP27.4■■□□□ 1.98
GTF3C4-202ENST00000483873 WASP42768 502 aa27.4■■□□□ 1.98
GTF3C4-202ENST00000483873 IRAK1P51617 712 aa27.4■■□□□ 1.98
GTF3C4-202ENST00000483873 AUHQ13825 339 aaKnown RBP27.4■■□□□ 1.98
GTF3C4-202ENST00000483873 FBXL22Q6P050 247 aa27.4■■□□□ 1.98
GTF3C4-202ENST00000483873 TMC6Q7Z403 805 aa27.4■■□□□ 1.98
GTF3C4-202ENST00000483873 MFN1Q8IWA4 741 aa27.4■■□□□ 1.98
GTF3C4-202ENST00000483873 CARNMT1Q8N4J0 409 aa27.4■■□□□ 1.98
GTF3C4-202ENST00000483873 DNAJC7Q99615 494 aa27.4■■□□□ 1.98
GTF3C4-202ENST00000483873 VANGL2Q9ULK5 521 aa27.4■■□□□ 1.98
GTF3C4-202ENST00000483873 A0A087X0T9 212 aa27.39■■□□□ 1.97
GTF3C4-202ENST00000483873 FAM228BP0C875 321 aa27.39■■□□□ 1.97
GTF3C4-202ENST00000483873 CD70P32970 193 aa27.39■■□□□ 1.97
GTF3C4-202ENST00000483873 FNTBP49356 437 aa27.39■■□□□ 1.97
GTF3C4-202ENST00000483873 TMEM92Q6UXU6 159 aa27.39■■□□□ 1.97
GTF3C4-202ENST00000483873 FAM172AQ8WUF8 416 aa27.39■■□□□ 1.97
GTF3C4-202ENST00000483873 IGSF8Q969P0 613 aa27.39■■□□□ 1.97
GTF3C4-202ENST00000483873 ISCUQ9H1K1 167 aa27.39■■□□□ 1.97
GTF3C4-202ENST00000483873 ZSCAN32Q9NX65 697 aa27.39■■□□□ 1.97
GTF3C4-202ENST00000483873 GGA2Q9UJY4 613 aa27.39■■□□□ 1.97
GTF3C4-202ENST00000483873 DOCK4Q8N1I0 1966 aa27.38■■□□□ 1.97
GTF3C4-202ENST00000483873 CCP110O43303 1012 aa27.38■■□□□ 1.97
GTF3C4-202ENST00000483873 MFAP3LO75121 409 aa27.38■■□□□ 1.97
GTF3C4-202ENST00000483873 NBL1P41271 181 aa27.38■■□□□ 1.97
GTF3C4-202ENST00000483873 ADKP55263 362 aaKnown RBP27.38■■□□□ 1.97
GTF3C4-202ENST00000483873 HDAC4P56524 1084 aa27.38■■□□□ 1.97
GTF3C4-202ENST00000483873 OGDHQ02218 1023 aa27.38■■□□□ 1.97
GTF3C4-202ENST00000483873 MAMLD1Q13495 774 aa27.38■■□□□ 1.97
GTF3C4-202ENST00000483873 FSCBQ5H9T9 825 aa27.38■■□□□ 1.97
GTF3C4-202ENST00000483873 PLEKHA7Q6IQ23 1121 aa27.38■■□□□ 1.97
GTF3C4-202ENST00000483873 STRADAQ7RTN6 431 aa27.38■■□□□ 1.97
GTF3C4-202ENST00000483873 DDX51Q8N8A6 666 aaKnown RBP eCLIP27.38■■□□□ 1.97
GTF3C4-202ENST00000483873 ZBTB44Q8NCP5 570 aa27.38■■□□□ 1.97
GTF3C4-202ENST00000483873 OR8K1Q8NGG5 319 aa27.38■■□□□ 1.97
GTF3C4-202ENST00000483873 SORCS1Q8WY21 1168 aa27.38■■□□□ 1.97
GTF3C4-202ENST00000483873 CENPIQ92674 756 aaPredicted RBP27.38■■□□□ 1.97
GTF3C4-202ENST00000483873 ZNF653Q96CK0 615 aa27.38■■□□□ 1.97
GTF3C4-202ENST00000483873 LMLNQ96KR4 655 aa27.38■■□□□ 1.97
GTF3C4-202ENST00000483873 CNOT8Q9UFF9 292 aaKnown RBP27.38■■□□□ 1.97
GTF3C4-202ENST00000483873 PAXBP1Q9Y5B6 917 aa27.38■■□□□ 1.97
GTF3C4-202ENST00000483873 LUC7L3O95232 432 aaKnown RBP27.37■■□□□ 1.97
GTF3C4-202ENST00000483873 PABPC1P11940 636 aaKnown RBP27.37■■□□□ 1.97
GTF3C4-202ENST00000483873 MRE11P49959 708 aa27.37■■□□□ 1.97
GTF3C4-202ENST00000483873 LMAN2Q12907 356 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms