RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 COLGALT1Q8NBJ5 622 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 CASP10Q92851 521 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 HDAC11Q96DB2 347 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 TOX2Q96NM4 488 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 CYTH2Q99418 400 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 OXCT2Q9BYC2 517 aaPredicted RBP13.63□□□□□ -0.23
CPNE1-225ENST00000483495 RNF208Q9H0X6 261 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 HIPK3Q9H422 1215 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 IGSF9Q9P2J2 1179 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 NR2E3Q9Y5X4 410 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 A0A1W2PQH9 124 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 TCRBV9S1A1TA0A576 114 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 C1QAP02745 245 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 EPHB2P29323 1055 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 CCR1P32246 355 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 MNX1P50219 401 aaPredicted RBP13.63□□□□□ -0.23
CPNE1-225ENST00000483495 FAAP100Q0VG06 881 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 SMARCB1Q12824 385 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 MPP2Q14168 576 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 DDR2Q16832 855 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 MANEALQ5VSG8 457 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 SLC39A5Q6ZMH5 540 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 DENND5BQ6ZUT9 1274 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 CEP57Q86XR8 500 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 ZNF567Q8N184 647 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 ARHGAP18Q8N392 663 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 CCNYQ8ND76 341 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 DCAKDQ8WVC6 231 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 RNF34Q969K3 372 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 CHMP6Q96FZ7 201 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 SCLYQ96I15 445 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 SIGLEC10Q96LC7 697 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 PAFAH2Q99487 392 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 PLAC1Q9HBJ0 212 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 SNX10Q9Y5X0 201 aa13.63□□□□□ -0.23
CPNE1-225ENST00000483495 VWA8A3KMH1 1905 aa13.62□□□□□ -0.23
CPNE1-225ENST00000483495 TANC1Q9C0D5 1861 aa13.62□□□□□ -0.23
CPNE1-225ENST00000483495 KCNU1A8MYU2 1149 aa13.62□□□□□ -0.23
CPNE1-225ENST00000483495 TRDMT1O14717 391 aaKnown RBP13.62□□□□□ -0.23
CPNE1-225ENST00000483495 PRPF4O43172 522 aaKnown RBP eCLIP13.62□□□□□ -0.231e-12■■□□□ 12.8
CPNE1-225ENST00000483495 MTSS1O43312 755 aa13.62□□□□□ -0.23
CPNE1-225ENST00000483495 STX2P32856 288 aa13.62□□□□□ -0.23
CPNE1-225ENST00000483495 GPR15P49685 360 aa13.62□□□□□ -0.23
CPNE1-225ENST00000483495 SARNPP82979 210 aaKnown RBP13.62□□□□□ -0.23
CPNE1-225ENST00000483495 NRG1Q02297 640 aaPredicted RBP13.62□□□□□ -0.23
CPNE1-225ENST00000483495 ZNF33AQ06730 810 aa13.62□□□□□ -0.23
CPNE1-225ENST00000483495 IFRD2Q12894 506 aaPredicted RBP13.62□□□□□ -0.23
CPNE1-225ENST00000483495 GPR17Q13304 367 aa13.62□□□□□ -0.23
CPNE1-225ENST00000483495 EFTUD2Q15029 972 aaKnown RBP eCLIP13.62□□□□□ -0.237e-8■■■■□ 26.4
CPNE1-225ENST00000483495 PKN2Q16513 984 aaKnown RBP13.62□□□□□ -0.23
CPNE1-225ENST00000483495 C1orf53Q5VUE5 145 aa13.62□□□□□ -0.23
CPNE1-225ENST00000483495 NETO2Q8NC67 525 aa13.62□□□□□ -0.23
CPNE1-225ENST00000483495 MZB1Q8WU39 189 aa13.62□□□□□ -0.23
CPNE1-225ENST00000483495 DPF3Q92784 378 aa13.62□□□□□ -0.23
CPNE1-225ENST00000483495 SERPINB11Q96P15 392 aa13.62□□□□□ -0.23
CPNE1-225ENST00000483495 SSU72Q9NP77 194 aaKnown RBP13.62□□□□□ -0.23
CPNE1-225ENST00000483495 OSER1Q9NX31 292 aa13.62□□□□□ -0.23
CPNE1-225ENST00000483495 HCSTQ9UBK5 93 aa13.62□□□□□ -0.23
CPNE1-225ENST00000483495 ZC3H7BQ9UGR2 993 aaKnown RBP13.62□□□□□ -0.23
CPNE1-225ENST00000483495 TBKBP1A7MCY6 615 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 H7C4K7 107 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 EBAG9O00559 213 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 EFEMP2O95967 443 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 DRD4P21917 467 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 PRKCHP24723 683 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 PTPN3P26045 913 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 GARSP41250 739 aaKnown RBP13.61□□□□□ -0.23
CPNE1-225ENST00000483495 MSH2P43246 934 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 LRRC8BQ6P9F7 803 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 LRRC43Q8N309 656 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 ATAD1Q8NBU5 361 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 SPPL2BQ8TCT7 592 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 C2orf15Q8WU43 125 aaKnown RBP13.61□□□□□ -0.23
CPNE1-225ENST00000483495 SLC44A1Q8WWI5 657 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 SPATA17Q96L03 361 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 PGLYRP2Q96PD5 576 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 EBNA1BP2Q99848 306 aaKnown RBP13.61□□□□□ -0.23
CPNE1-225ENST00000483495 PRMT1Q99873 361 aaKnown RBP13.61□□□□□ -0.23
CPNE1-225ENST00000483495 CRISPLD2Q9H0B8 497 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 TRABDQ9H4I3 376 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 KCNK9Q9NPC2 374 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 SFMBT1Q9UHJ3 866 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 RSPH14Q9UHP6 348 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 GGA2Q9UJY4 613 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 TTLL3Q9Y4R7 772 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 PLXNA3P51805 1871 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 TET1Q8NFU7 2136 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 MTMR11A4FU01 709 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 FAM47DPA6NHR8 397 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 MSI1O43347 362 aaKnown RBP13.61□□□□□ -0.23
CPNE1-225ENST00000483495 PAGE1O75459 146 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 VNN2O95498 520 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 MYCP01106 439 aaPredicted RBP13.61□□□□□ -0.23
CPNE1-225ENST00000483495 KRT15P19012 456 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 CCL23P55773 120 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 USP46P62068 366 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 RTP2Q5QGT7 225 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 SDHAF4Q5VUM1 108 aa13.61□□□□□ -0.23
CPNE1-225ENST00000483495 RSPO2Q6UXX9 243 aaPredicted RBP13.61□□□□□ -0.23
CPNE1-225ENST00000483495 ANKS3Q6ZW76 656 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms