RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 FBRSQ9HAH7 460 aa13.96□□□□□ -0.17
CTDSP1-208ENST00000482272 STIM2Q9P246 746 aa13.96□□□□□ -0.17
CTDSP1-208ENST00000482272 TJP2Q9UDY2 1190 aa13.96□□□□□ -0.17
CTDSP1-208ENST00000482272 SPTBN2O15020 2390 aa13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 BECN2A8MW95 431 aa13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 SLC9A1P19634 815 aa13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 CD70P32970 193 aa13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 USP8P40818 1118 aa13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 ST8SIA6P61647 398 aa13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 YWHAZP63104 245 aaKnown RBP13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 ZBTB16Q05516 673 aa13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 SLC14A1Q13336 389 aa13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 PTPRNQ16849 979 aa13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 TPD52L1Q16890 204 aaPredicted RBP13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 ARHGAP44Q17R89 818 aa13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 NADSYN1Q6IA69 706 aa13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 TRIM65Q6PJ69 517 aa13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 TMEM110Q86TL2 294 aa13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 CARNMT1Q8N4J0 409 aa13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 MLKLQ8NB16 471 aa13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 SLC39A13Q96H72 371 aa13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 FCRL2Q96LA5 508 aaPredicted RBP13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 CRACR2AQ9BSW2 395 aa13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 MIR1-1HGQ9H1L0 117 aa13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 PCED1AQ9H1Q7 454 aa13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 LHX5Q9H2C1 402 aa13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 POPDC2Q9HBU9 364 aa13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 PRSS16Q9NQE7 514 aa13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 DNAAF2Q9NVR5 837 aaKnown RBP13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 SLC12A6Q9UHW9 1150 aa13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 CACNA1GO43497 2377 aa13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 NYNRINQ9P2P1 1898 aaKnown RBP13.95□□□□□ -0.18
CTDSP1-208ENST00000482272 BCAT2O15382 392 aaPredicted RBP13.94□□□□□ -0.18
CTDSP1-208ENST00000482272 PAPSS1O43252 624 aaPredicted RBP13.94□□□□□ -0.18
CTDSP1-208ENST00000482272 MOCS3O95396 460 aa13.94□□□□□ -0.18
CTDSP1-208ENST00000482272 APOEP02649 317 aa13.94□□□□□ -0.18
CTDSP1-208ENST00000482272 DNTTP04053 509 aa13.94□□□□□ -0.18
CTDSP1-208ENST00000482272 ASLP04424 464 aa13.94□□□□□ -0.18
CTDSP1-208ENST00000482272 PITX1P78337 314 aaPredicted RBP13.94□□□□□ -0.18
CTDSP1-208ENST00000482272 EXOC3L4Q17RC7 722 aa13.94□□□□□ -0.18
CTDSP1-208ENST00000482272 MS4A13Q5J8X5 152 aa13.94□□□□□ -0.18
CTDSP1-208ENST00000482272 SYPL2Q5VXT5 272 aa13.94□□□□□ -0.18
CTDSP1-208ENST00000482272 SMYD5Q6GMV2 418 aa13.94□□□□□ -0.18
CTDSP1-208ENST00000482272 DPY19L2P1Q6NXN4 242 aa13.94□□□□□ -0.18
CTDSP1-208ENST00000482272 PIP4P1Q86T03 277 aa13.94□□□□□ -0.18
CTDSP1-208ENST00000482272 FAM124AQ86V42 546 aa13.94□□□□□ -0.18
CTDSP1-208ENST00000482272 CACUL1Q86Y37 369 aa13.94□□□□□ -0.18
CTDSP1-208ENST00000482272 ZNF366Q8N895 744 aa13.94□□□□□ -0.18
CTDSP1-208ENST00000482272 ADAM32Q8TC27 787 aa13.94□□□□□ -0.18
CTDSP1-208ENST00000482272 TTC17Q96AE7 1141 aa13.94□□□□□ -0.18
CTDSP1-208ENST00000482272 PRICKLE1Q96MT3 831 aaPredicted RBP13.94□□□□□ -0.18
CTDSP1-208ENST00000482272 THAP9Q9H5L6 903 aa13.94□□□□□ -0.18
CTDSP1-208ENST00000482272 SIX2Q9NPC8 291 aa13.94□□□□□ -0.18
CTDSP1-208ENST00000482272 APEX2Q9UBZ4 518 aa13.94□□□□□ -0.18
CTDSP1-208ENST00000482272 PCDHB9Q9Y5E1 797 aa13.94□□□□□ -0.18
CTDSP1-208ENST00000482272 PI4KAP42356 2102 aa13.94□□□□□ -0.18
CTDSP1-208ENST00000482272 GTPBP10A4D1E9 387 aaKnown RBP13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 E5RJQ4 531 aa13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 H0Y626 953 aa13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 TRUB2O95900 331 aaKnown RBP13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 MOCS2O96007 188 aaPredicted RBP13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 PNMA6AP0CW24 399 aaPredicted RBP13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 C7P10643 843 aa13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 MTIF2P46199 727 aaKnown RBP13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 SNX16P57768 344 aa13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 RPS24P62847 133 aaKnown RBP13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 PTK2Q05397 1052 aa13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 SFSWAPQ12872 951 aaKnown RBP13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 CDH18Q13634 790 aa13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 TTC31Q49AM3 519 aaPredicted RBP13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 EFHC1Q5JVL4 640 aa13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 IL27RAQ6UWB1 636 aa13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 TAC4Q86UU9 113 aa13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 ZCCHC9Q8N567 271 aaKnown RBP13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 ATP6V0D2Q8N8Y2 350 aa13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 OR2I1PQ8NGU4 316 aa13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 BTN2A3PQ96KV6 586 aa13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 NOX5Q96PH1 765 aa13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 BTBD1Q9H0C5 482 aa13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 NUCKS1Q9H1E3 243 aaKnown RBP13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.93□□□□□ -0.181e-8■■■■■ 33.1
CTDSP1-208ENST00000482272 CHMP5Q9NZZ3 219 aa13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 KIAA1522Q9P206 1035 aaPredicted RBP13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 EIF2B4Q9UI10 523 aaKnown RBP13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 XPO7Q9UIA9 1087 aaKnown RBP13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 SCML1Q9UN30 329 aa13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 NCKAP1Q9Y2A7 1128 aa13.93□□□□□ -0.18
CTDSP1-208ENST00000482272 RNASEH1O60930 286 aaKnown RBP13.92□□□□□ -0.18
CTDSP1-208ENST00000482272 KRT37O76014 449 aa13.92□□□□□ -0.18
CTDSP1-208ENST00000482272 LUC7L3O95232 432 aaKnown RBP13.92□□□□□ -0.18
CTDSP1-208ENST00000482272 GLI1P08151 1106 aa13.92□□□□□ -0.18
CTDSP1-208ENST00000482272 SLC2A3P11169 496 aa13.92□□□□□ -0.18
CTDSP1-208ENST00000482272 CD59P13987 128 aa13.92□□□□□ -0.18
CTDSP1-208ENST00000482272 TACR2P21452 398 aa13.92□□□□□ -0.18
CTDSP1-208ENST00000482272 PON1P27169 355 aa13.92□□□□□ -0.18
CTDSP1-208ENST00000482272 CSKP41240 450 aa13.92□□□□□ -0.18
CTDSP1-208ENST00000482272 RPS14P62263 151 aaKnown RBP13.92□□□□□ -0.18
CTDSP1-208ENST00000482272 SIM1P81133 766 aaPredicted RBP13.92□□□□□ -0.18
CTDSP1-208ENST00000482272 GRIK2Q13002 908 aa13.92□□□□□ -0.18
CTDSP1-208ENST00000482272 PDCLQ13371 301 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms