RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 TRDMT1O14717 391 aaKnown RBP16.24■□□□□ 0.19
RXRA-202ENST00000481739 MFSD11O43934 449 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 APRTP07741 180 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 OR4Q2P0C623 313 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 MX2P20592 715 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 ELK3P41970 407 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 MAGEA3P43357 314 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 TPI1P60174 286 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 CTXN3Q4LDR2 81 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 SLC39A12Q504Y0 691 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 BSPRYQ5W0U4 402 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 ADGRD1Q6QNK2 874 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 YTHDF3Q7Z739 585 aaKnown RBP16.24■□□□□ 0.19
RXRA-202ENST00000481739 CPLX4Q7Z7G2 160 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 LRRTM3Q86VH5 581 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 CCDC110Q8TBZ0 833 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 BCL7CQ8WUZ0 217 aaPredicted RBP16.24■□□□□ 0.19
RXRA-202ENST00000481739 DPF3Q92784 378 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 ALKBH8Q96BT7 664 aaKnown RBP16.24■□□□□ 0.19
RXRA-202ENST00000481739 SMC6Q96SB8 1091 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 ZBED2Q9BTP6 218 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 WDCPQ9H6R7 721 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 ABCC13Q9NSE7 274 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 TMLHEQ9NVH6 421 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 VWA8A3KMH1 1905 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 SYNJ2BP-COX16A0A087WUM0 186 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 FAM47DPA6NHR8 397 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 CREB3O43889 395 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 KRT15P19012 456 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 FGFR3P22607 806 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 SSTR1P30872 391 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 MSH2P43246 934 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 GAD2Q05329 585 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 BRMS1LQ5PSV4 323 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 ZNF280DQ6N043 979 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 PSRC1Q6PGN9 363 aaPredicted RBP16.24■□□□□ 0.19
RXRA-202ENST00000481739 CMTR2Q8IYT2 770 aaKnown RBP16.24■□□□□ 0.19
RXRA-202ENST00000481739 CYP4X1Q8N118 509 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 FBF1Q8TES7 1133 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 ZNF558Q96NG5 402 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 WDR83Q9BRX9 315 aaKnown RBP16.24■□□□□ 0.19
RXRA-202ENST00000481739 RHOBTB2Q9BYZ6 727 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 ZCWPW1Q9H0M4 648 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 KCNK9Q9NPC2 374 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 COX16Q9P0S2 106 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 CHMP2BQ9UQN3 213 aa16.24■□□□□ 0.19
RXRA-202ENST00000481739 IGLV3-25P01717 112 aa16.23■□□□□ 0.19
RXRA-202ENST00000481739 DRD4P21917 467 aa16.23■□□□□ 0.19
RXRA-202ENST00000481739 RABGGTBP53611 331 aa16.23■□□□□ 0.19
RXRA-202ENST00000481739 NRLP54845 237 aa16.23■□□□□ 0.19
RXRA-202ENST00000481739 ARPP19P56211 112 aa16.23■□□□□ 0.19
RXRA-202ENST00000481739 ZNF33AQ06730 810 aa16.23■□□□□ 0.19
RXRA-202ENST00000481739 ANKRD20A2Q5SQ80 823 aa16.23■□□□□ 0.19
RXRA-202ENST00000481739 HP1BP3Q5SSJ5 553 aaPredicted RBP16.23■□□□□ 0.19
RXRA-202ENST00000481739 TMEM240Q5SV17 173 aa16.23■□□□□ 0.19
RXRA-202ENST00000481739 ANKRD20A1Q5TYW2 823 aa16.23■□□□□ 0.19
RXRA-202ENST00000481739 ANKRD20A3Q5VUR7 823 aa16.23■□□□□ 0.19
RXRA-202ENST00000481739 TAS1R1Q7RTX1 841 aa16.23■□□□□ 0.19
RXRA-202ENST00000481739 SRLQ86TD4 932 aa16.23■□□□□ 0.19
RXRA-202ENST00000481739 IGSF21Q96ID5 467 aa16.23■□□□□ 0.19
RXRA-202ENST00000481739 PAFAH2Q99487 392 aa16.23■□□□□ 0.19
RXRA-202ENST00000481739 PRMT1Q99873 361 aaKnown RBP16.23■□□□□ 0.19
RXRA-202ENST00000481739 LBHD1Q9BQE6 289 aaPredicted RBP16.23■□□□□ 0.19
RXRA-202ENST00000481739 TTPALQ9BTX7 342 aa16.23■□□□□ 0.19
RXRA-202ENST00000481739 OSBPL2Q9H1P3 480 aa16.23■□□□□ 0.19
RXRA-202ENST00000481739 MRPL42Q9Y6G3 142 aaKnown RBP16.23■□□□□ 0.19
RXRA-202ENST00000481739 IKBKGQ9Y6K9 419 aa16.23■□□□□ 0.19
RXRA-202ENST00000481739 COL4A6Q14031 1691 aa16.23■□□□□ 0.19
RXRA-202ENST00000481739 PTPRSQ13332 1948 aa16.22■□□□□ 0.19
RXRA-202ENST00000481739 TRIM66O15016 1216 aa16.22■□□□□ 0.19
RXRA-202ENST00000481739 GBP2P32456 591 aaPredicted RBP16.22■□□□□ 0.19
RXRA-202ENST00000481739 CCNJLQ8IV13 435 aa16.22■□□□□ 0.19
RXRA-202ENST00000481739 CACNA2D3Q8IZS8 1091 aa16.22■□□□□ 0.19
RXRA-202ENST00000481739 TAB3Q8N5C8 712 aaPredicted RBP16.22■□□□□ 0.19
RXRA-202ENST00000481739 DQX1Q8TE96 717 aaKnown RBP16.22■□□□□ 0.19
RXRA-202ENST00000481739 TRABDQ9H4I3 376 aa16.22■□□□□ 0.19
RXRA-202ENST00000481739 RABEP2Q9H5N1 569 aa16.22■□□□□ 0.19
RXRA-202ENST00000481739 RC3H2Q9HBD1 1191 aaKnown RBP16.22■□□□□ 0.19
RXRA-202ENST00000481739 IQANK1A0A1B0GTG1 560 aa16.22■□□□□ 0.19
RXRA-202ENST00000481739 H7C4K7 107 aa16.22■□□□□ 0.19
RXRA-202ENST00000481739 BANF1O75531 89 aa16.22■□□□□ 0.19
RXRA-202ENST00000481739 KIAA0754O94854 1291 aa16.22■□□□□ 0.19
RXRA-202ENST00000481739 MAP3K6O95382 1288 aa16.22■□□□□ 0.19
RXRA-202ENST00000481739 VAV1P15498 845 aa16.22■□□□□ 0.19
RXRA-202ENST00000481739 ERCC2P18074 760 aa16.22■□□□□ 0.19
RXRA-202ENST00000481739 LAG3P18627 525 aa16.22■□□□□ 0.19
RXRA-202ENST00000481739 GRIK1P39086 918 aa16.22■□□□□ 0.19
RXRA-202ENST00000481739 MAGEA11P43364 429 aa16.22■□□□□ 0.19
RXRA-202ENST00000481739 SLC5A3P53794 718 aa16.22■□□□□ 0.19
RXRA-202ENST00000481739 YWHAGP61981 247 aaKnown RBP eCLIP16.22■□□□□ 0.19
RXRA-202ENST00000481739 IL9RQ01113 521 aa16.22■□□□□ 0.19
RXRA-202ENST00000481739 SMARCB1Q12824 385 aa16.22■□□□□ 0.19
RXRA-202ENST00000481739 PARP6Q2NL67 630 aa16.22■□□□□ 0.19
RXRA-202ENST00000481739 RTP2Q5QGT7 225 aa16.22■□□□□ 0.19
RXRA-202ENST00000481739 KIAA1841Q6NSI8 718 aa16.22■□□□□ 0.19
RXRA-202ENST00000481739 CAPN12Q6ZSI9 719 aa16.22■□□□□ 0.19
RXRA-202ENST00000481739 CYS1Q717R9 158 aa16.22■□□□□ 0.19
RXRA-202ENST00000481739 TAC4Q86UU9 113 aa16.22■□□□□ 0.19
RXRA-202ENST00000481739 CAND1Q86VP6 1230 aaKnown RBP16.22■□□□□ 0.19
RXRA-202ENST00000481739 ARHGAP18Q8N392 663 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms