RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 METTL12A8MUP2 240 aa12.59□□□□□ -0.39
SQSTM1-207ENST00000481335 CAPN9O14815 690 aa12.59□□□□□ -0.39
SQSTM1-207ENST00000481335 THAP12O43422 761 aa12.59□□□□□ -0.39
SQSTM1-207ENST00000481335 TSPAN3O60637 253 aa12.59□□□□□ -0.39
SQSTM1-207ENST00000481335 TBL1XO60907 577 aa12.59□□□□□ -0.39
SQSTM1-207ENST00000481335 FYNP06241 537 aa12.59□□□□□ -0.39
SQSTM1-207ENST00000481335 SLC2A3P11169 496 aa12.59□□□□□ -0.39
SQSTM1-207ENST00000481335 SFSWAPQ12872 951 aaKnown RBP12.59□□□□□ -0.39
SQSTM1-207ENST00000481335 ST3GAL2Q16842 350 aa12.59□□□□□ -0.39
SQSTM1-207ENST00000481335 PTPRNQ16849 979 aa12.59□□□□□ -0.39
SQSTM1-207ENST00000481335 EXOC3L4Q17RC7 722 aa12.59□□□□□ -0.39
SQSTM1-207ENST00000481335 PLEKHG6Q3KR16 790 aa12.59□□□□□ -0.39
SQSTM1-207ENST00000481335 TTC31Q49AM3 519 aaPredicted RBP12.59□□□□□ -0.39
SQSTM1-207ENST00000481335 TTC39BQ5VTQ0 682 aaPredicted RBP12.59□□□□□ -0.39
SQSTM1-207ENST00000481335 IL27RAQ6UWB1 636 aa12.59□□□□□ -0.39
SQSTM1-207ENST00000481335 FAM114A1Q8IWE2 563 aa12.59□□□□□ -0.39
SQSTM1-207ENST00000481335 SHC3Q92529 594 aa12.59□□□□□ -0.39
SQSTM1-207ENST00000481335 TTC17Q96AE7 1141 aa12.59□□□□□ -0.39
SQSTM1-207ENST00000481335 BTN2A3PQ96KV6 586 aa12.59□□□□□ -0.39
SQSTM1-207ENST00000481335 NOX5Q96PH1 765 aa12.59□□□□□ -0.39
SQSTM1-207ENST00000481335 MIS12Q9H081 205 aa12.59□□□□□ -0.39
SQSTM1-207ENST00000481335 LHX5Q9H2C1 402 aa12.59□□□□□ -0.39
SQSTM1-207ENST00000481335 OSGEPQ9NPF4 335 aa12.59□□□□□ -0.39
SQSTM1-207ENST00000481335 CD93Q9NPY3 652 aa12.59□□□□□ -0.39
SQSTM1-207ENST00000481335 TMEM51Q9NW97 253 aa12.59□□□□□ -0.39
SQSTM1-207ENST00000481335 CHMP5Q9NZZ3 219 aa12.59□□□□□ -0.39
SQSTM1-207ENST00000481335 PCDHGC3Q9UN70 934 aa12.59□□□□□ -0.39
SQSTM1-207ENST00000481335 KCNJ18B7U540 433 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 E5RJQ4 531 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 H0Y626 953 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 PIK3R2O00459 728 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 PAPSS1O43252 624 aaPredicted RBP12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 GJB3O75712 270 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 LETM1O95202 739 aaPredicted RBP12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 TRIM16O95361 564 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 MOCS3O95396 460 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 IGLV3-25P01717 112 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 DNTTP04053 509 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 ZNF883P0CG24 379 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 SLC6A4P31645 630 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 RDXP35241 583 aaKnown RBP12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 ST8SIA6P61647 398 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 YWHAZP63104 245 aaKnown RBP12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 PDCLQ13371 301 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 EIF4EBP2Q13542 120 aaPredicted RBP12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 SLC12A1Q13621 1099 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 CDH18Q13634 790 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 MS4A13Q5J8X5 152 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 NADSYN1Q6IA69 706 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 RFWD3Q6PCD5 774 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 TAC4Q86UU9 113 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 SCUBE3Q8IX30 993 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 DEFB124Q8NES8 71 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 SORCS1Q8WY21 1168 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 LMLNQ96KR4 655 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 PRICKLE1Q96MT3 831 aaPredicted RBP12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 GTPBP2Q9BX10 602 aaKnown RBP12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 GPR174Q9BXC1 333 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.58□□□□□ -0.43e-6■■□□□ 13.4
SQSTM1-207ENST00000481335 TJP2Q9UDY2 1190 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 SLC12A6Q9UHW9 1150 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 DACH1Q9UI36 760 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 NAALADL1Q9UQQ1 740 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 CABIN1Q9Y6J0 2220 aa12.58□□□□□ -0.4
SQSTM1-207ENST00000481335 GIPC1O14908 333 aa12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 BCAT2O15382 392 aaPredicted RBP12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 HSF2BPO75031 334 aa12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 LUC7L3O95232 432 aaKnown RBP12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 CER1O95813 267 aa12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 TRUB2O95900 331 aaKnown RBP12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 SRPRAP08240 638 aaKnown RBP12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 CD70P32970 193 aa12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 SGSHP51688 502 aa12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 OXCT1P55809 520 aa12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 PTK2Q05397 1052 aa12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 GRIK2Q13002 908 aa12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 MAN2A1Q16706 1144 aa12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 CT47A1Q5JQC4 288 aaPredicted RBP12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 EFHC1Q5JVL4 640 aa12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 DCAF12L1Q5VU92 463 aa12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 ZNF776Q68DI1 518 aaPredicted RBP12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 DENND1BQ6P3S1 775 aa12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 USP30Q70CQ3 517 aa12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 DEFB119Q8N690 84 aa12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 ATP6V0D2Q8N8Y2 350 aa12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 WFDC5Q8TCV5 224 aa12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 CYB5D2Q8WUJ1 264 aa12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 PPP1R9BQ96SB3 815 aa12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 BTBD1Q9H0C5 482 aa12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 SGK2Q9HBY8 427 aa12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 PRSS16Q9NQE7 514 aa12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 KIAA1522Q9P206 1035 aaPredicted RBP12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 TPX2Q9ULW0 747 aaKnown RBP12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 WASF3Q9UPY6 502 aa12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 CEP83Q9Y592 693 aa12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 TP53BP1Q12888 1972 aaPredicted RBP12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 KNL1Q8NG31 2342 aa12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 ITIH6Q6UXX5 1313 aa12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 ASPMQ8IZT6 3477 aa12.57□□□□□ -0.4
SQSTM1-207ENST00000481335 FRYQ5TBA9 3013 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms