RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 STIM2Q9P246 746 aa13.84□□□□□ -0.19
PTPN7-212ENST00000480836 SUSD2Q9UGT4 822 aa13.84□□□□□ -0.19
PTPN7-212ENST00000480836 ARMCX3Q9UH62 379 aaPredicted RBP13.84□□□□□ -0.19
PTPN7-212ENST00000480836 CYTH4Q9UIA0 394 aa13.84□□□□□ -0.19
PTPN7-212ENST00000480836 MAN1B1Q9UKM7 699 aa13.84□□□□□ -0.19
PTPN7-212ENST00000480836 NAALADL1Q9UQQ1 740 aa13.84□□□□□ -0.19
PTPN7-212ENST00000480836 PCDHB4Q9Y5E5 795 aa13.84□□□□□ -0.19
PTPN7-212ENST00000480836 TMEM8BA6NDV4 472 aa13.83□□□□□ -0.2
PTPN7-212ENST00000480836 C10orf142B7Z368 130 aa13.83□□□□□ -0.2
PTPN7-212ENST00000480836 ACSL4O60488 711 aa13.83□□□□□ -0.2
PTPN7-212ENST00000480836 STX10O60499 249 aa13.83□□□□□ -0.2
PTPN7-212ENST00000480836 IGHV4-34P06331 123 aa13.83□□□□□ -0.2
PTPN7-212ENST00000480836 ZNF423Q2M1K9 1284 aa13.83□□□□□ -0.2
PTPN7-212ENST00000480836 FNDC3BQ53EP0 1204 aaKnown RBP13.83□□□□□ -0.2
PTPN7-212ENST00000480836 TTI2Q6NXR4 508 aa13.83□□□□□ -0.2
PTPN7-212ENST00000480836 C19orf48Q6RUI8 117 aa13.83□□□□□ -0.2
PTPN7-212ENST00000480836 LRSAM1Q6UWE0 723 aa13.83□□□□□ -0.2
PTPN7-212ENST00000480836 GLRX5Q86SX6 157 aa13.83□□□□□ -0.2
PTPN7-212ENST00000480836 PROSER1Q86XN7 944 aa13.83□□□□□ -0.2
PTPN7-212ENST00000480836 SIX6OS1Q8N1H7 587 aa13.83□□□□□ -0.2
PTPN7-212ENST00000480836 MDM1Q8TC05 714 aa13.83□□□□□ -0.2
PTPN7-212ENST00000480836 SETD7Q8WTS6 366 aaKnown RBP13.83□□□□□ -0.2
PTPN7-212ENST00000480836 SLC39A13Q96H72 371 aa13.83□□□□□ -0.2
PTPN7-212ENST00000480836 NUCKS1Q9H1E3 243 aaKnown RBP13.83□□□□□ -0.2
PTPN7-212ENST00000480836 TM9SF3Q9HD45 589 aa13.83□□□□□ -0.2
PTPN7-212ENST00000480836 OLA1Q9NTK5 396 aaKnown RBP13.83□□□□□ -0.2
PTPN7-212ENST00000480836 HESX1Q9UBX0 185 aa13.83□□□□□ -0.2
PTPN7-212ENST00000480836 TJP2Q9UDY2 1190 aa13.83□□□□□ -0.2
PTPN7-212ENST00000480836 SLCO3A1Q9UIG8 710 aa13.83□□□□□ -0.2
PTPN7-212ENST00000480836 PKD1L2Q7Z442 2459 aa13.83□□□□□ -0.2
PTPN7-212ENST00000480836 ZFYVE26Q68DK2 2539 aa13.83□□□□□ -0.2
PTPN7-212ENST00000480836 DMXL2Q8TDJ6 3036 aa13.82□□□□□ -0.2
PTPN7-212ENST00000480836 H0Y626 953 aa13.82□□□□□ -0.2
PTPN7-212ENST00000480836 TRIM16O95361 564 aa13.82□□□□□ -0.2
PTPN7-212ENST00000480836 LTFP02788 710 aa13.82□□□□□ -0.2
PTPN7-212ENST00000480836 WNT1P04628 370 aa13.82□□□□□ -0.2
PTPN7-212ENST00000480836 PAEPP09466 180 aa13.82□□□□□ -0.2
PTPN7-212ENST00000480836 DLDP09622 509 aaKnown RBP13.82□□□□□ -0.2
PTPN7-212ENST00000480836 SETSIPP0DME0 302 aa13.82□□□□□ -0.2
PTPN7-212ENST00000480836 ACADMP11310 421 aa13.82□□□□□ -0.2
PTPN7-212ENST00000480836 GPD2P43304 727 aa13.82□□□□□ -0.2
PTPN7-212ENST00000480836 RPL34P49207 117 aaKnown RBP13.82□□□□□ -0.2
PTPN7-212ENST00000480836 TBX4P57082 545 aa13.82□□□□□ -0.2
PTPN7-212ENST00000480836 APBA1Q02410 837 aa13.82□□□□□ -0.2
PTPN7-212ENST00000480836 KCNJ12Q14500 433 aa13.82□□□□□ -0.2
PTPN7-212ENST00000480836 TAF5Q15542 800 aa13.82□□□□□ -0.2
PTPN7-212ENST00000480836 DENND1BQ6P3S1 775 aa13.82□□□□□ -0.2
PTPN7-212ENST00000480836 FIBINQ8TAL6 211 aa13.82□□□□□ -0.2
PTPN7-212ENST00000480836 DQX1Q8TE96 717 aaKnown RBP13.82□□□□□ -0.2
PTPN7-212ENST00000480836 SNX19Q92543 992 aa13.82□□□□□ -0.2
PTPN7-212ENST00000480836 TTC17Q96AE7 1141 aa13.82□□□□□ -0.2
PTPN7-212ENST00000480836 MED15Q96RN5 788 aa13.82□□□□□ -0.2
PTPN7-212ENST00000480836 CAAP1Q9H8G2 361 aa13.82□□□□□ -0.2
PTPN7-212ENST00000480836 KIAA1257Q9ULG3 409 aa13.82□□□□□ -0.2
PTPN7-212ENST00000480836 PLA2G4CQ9UP65 541 aa13.82□□□□□ -0.2
PTPN7-212ENST00000480836 PCDHB9Q9Y5E1 797 aa13.82□□□□□ -0.2
PTPN7-212ENST00000480836 TTC34A8MYJ7 566 aa13.81□□□□□ -0.2
PTPN7-212ENST00000480836 H0Y8X5 98 aa13.81□□□□□ -0.2
PTPN7-212ENST00000480836 M0QYV0 167 aa13.81□□□□□ -0.2
PTPN7-212ENST00000480836 PMM2O15305 246 aa13.81□□□□□ -0.2
PTPN7-212ENST00000480836 SIN3BO75182 1162 aa13.81□□□□□ -0.2
PTPN7-212ENST00000480836 FSBPO95073 299 aa13.81□□□□□ -0.2
PTPN7-212ENST00000480836 SEMA4FO95754 770 aa13.81□□□□□ -0.2
PTPN7-212ENST00000480836 LATS1O95835 1130 aa13.81□□□□□ -0.2
PTPN7-212ENST00000480836 ZNF883P0CG24 379 aa13.81□□□□□ -0.2
PTPN7-212ENST00000480836 CSKP41240 450 aa13.81□□□□□ -0.2
PTPN7-212ENST00000480836 MATKP42679 507 aa13.81□□□□□ -0.2
PTPN7-212ENST00000480836 METAP1P53582 386 aa13.81□□□□□ -0.2
PTPN7-212ENST00000480836 SLC8A3P57103 927 aa13.81□□□□□ -0.2
PTPN7-212ENST00000480836 LRRC63Q05C16 580 aa13.81□□□□□ -0.2
PTPN7-212ENST00000480836 COL9A2Q14055 689 aaPredicted RBP13.81□□□□□ -0.2
PTPN7-212ENST00000480836 SHBQ15464 509 aa13.81□□□□□ -0.2
PTPN7-212ENST00000480836 C9orf64Q5T6V5 341 aa13.81□□□□□ -0.2
PTPN7-212ENST00000480836 DHX40Q8IX18 779 aaKnown RBP13.81□□□□□ -0.2
PTPN7-212ENST00000480836 APCDD1Q8J025 514 aa13.81□□□□□ -0.2
PTPN7-212ENST00000480836 AHI1Q8N157 1196 aa13.81□□□□□ -0.2
PTPN7-212ENST00000480836 PPM1KQ8N3J5 372 aa13.81□□□□□ -0.2
PTPN7-212ENST00000480836 EHBP1Q8NDI1 1231 aa13.81□□□□□ -0.2
PTPN7-212ENST00000480836 RHBDD1Q8TEB9 315 aa13.81□□□□□ -0.2
PTPN7-212ENST00000480836 WFIKKN2Q8TEU8 576 aa13.81□□□□□ -0.2
PTPN7-212ENST00000480836 SMARCE1Q969G3 411 aa13.81□□□□□ -0.2
PTPN7-212ENST00000480836 FAM129BQ96TA1 746 aa13.81□□□□□ -0.2
PTPN7-212ENST00000480836 TSG101Q99816 390 aa13.81□□□□□ -0.2
PTPN7-212ENST00000480836 ZDHHC5Q9C0B5 715 aa13.81□□□□□ -0.2
PTPN7-212ENST00000480836 RSPH9Q9H1X1 276 aaPredicted RBP13.81□□□□□ -0.2
PTPN7-212ENST00000480836 ANKRD6Q9Y2G4 727 aa13.81□□□□□ -0.2
PTPN7-212ENST00000480836 PLXNA2O75051 1894 aa13.8□□□□□ -0.2
PTPN7-212ENST00000480836 CACNA1GO43497 2377 aa13.8□□□□□ -0.2
PTPN7-212ENST00000480836 FAM149AA5PLN7 773 aa13.8□□□□□ -0.2
PTPN7-212ENST00000480836 GOLGA8CPA6NN73 597 aa13.8□□□□□ -0.2
PTPN7-212ENST00000480836 CBX4O00257 560 aa13.8□□□□□ -0.2
PTPN7-212ENST00000480836 PAPSS1O43252 624 aaPredicted RBP13.8□□□□□ -0.2
PTPN7-212ENST00000480836 VAV1P15498 845 aa13.8□□□□□ -0.2
PTPN7-212ENST00000480836 CLDN6P56747 220 aa13.8□□□□□ -0.2
PTPN7-212ENST00000480836 STX17P56962 302 aa13.8□□□□□ -0.2
PTPN7-212ENST00000480836 IL9RQ01113 521 aa13.8□□□□□ -0.2
PTPN7-212ENST00000480836 ARID5AQ03989 594 aa13.8□□□□□ -0.2
PTPN7-212ENST00000480836 EIF4EBP2Q13542 120 aaPredicted RBP13.8□□□□□ -0.2
PTPN7-212ENST00000480836 HNRNPDQ14103 355 aaKnown RBP13.8□□□□□ -0.2
PTPN7-212ENST00000480836 DCAF6Q58WW2 860 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms