RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 TRMT2BQ96GJ1 504 aaKnown RBP11.36□□□□□ -0.59
VTI1A-204ENST00000480057 MYRFLQ96LU7 910 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 VAT1Q99536 393 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 CLSTN3Q9BQT9 956 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 CCDC77Q9BR77 488 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 MAGEB5Q9BZ81 275 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 CRISPLD1Q9H336 500 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 RETREG1Q9H6L5 497 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 EIF2B3Q9NR50 452 aaKnown RBP11.36□□□□□ -0.59
VTI1A-204ENST00000480057 TMPRSS4Q9NRS4 437 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 ETNK2Q9NVF9 386 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 OSER1Q9NX31 292 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 PSD3Q9NYI0 1048 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 PRKAG2Q9UGJ0 569 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 SLC12A6Q9UHW9 1150 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 SLC27A5Q9Y2P5 690 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 HBS1LQ9Y450 684 aaKnown RBP11.36□□□□□ -0.59
VTI1A-204ENST00000480057 PCDHB12Q9Y5F1 795 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 CLUHO75153 1309 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 A0A087WUV0 522 aaPredicted RBP11.35□□□□□ -0.59
VTI1A-204ENST00000480057 FAM72CH0Y354 149 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 POLR3GO15318 223 aaPredicted RBP11.35□□□□□ -0.59
VTI1A-204ENST00000480057 ADAM12O43184 909 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 PAGE1O75459 146 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 GJB5O95377 273 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 EPHB2P29323 1055 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 PGFP49763 221 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 TUBP50607 506 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 MLLT6P55198 1093 aaPredicted RBP11.35□□□□□ -0.59
VTI1A-204ENST00000480057 BASP1P80723 227 aaKnown RBP11.35□□□□□ -0.59
VTI1A-204ENST00000480057 FPGSQ05932 587 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 SEMA5AQ13591 1074 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 KCTD19Q17RG1 926 aaPredicted RBP11.35□□□□□ -0.59
VTI1A-204ENST00000480057 KRT71Q3SY84 523 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 FAM72AQ5TYM5 149 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 SDHAF4Q5VUM1 108 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 FAM72DQ6L9T8 149 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 PSRC1Q6PGN9 363 aaPredicted RBP11.35□□□□□ -0.59
VTI1A-204ENST00000480057 FAM72BQ86X60 149 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 PDIK1LQ8N165 341 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 VPS52Q8N1B4 723 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 RIBC1Q8N443 379 aaPredicted RBP11.35□□□□□ -0.59
VTI1A-204ENST00000480057 ARFGAP2Q8N6H7 521 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 PHOSPHO2Q8TCD6 241 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 LRRC39Q96DD0 335 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 FCRL2Q96LA5 508 aaPredicted RBP11.35□□□□□ -0.59
VTI1A-204ENST00000480057 SERPINB12Q96P63 405 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 PRDM12Q9H4Q4 367 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 C10orf88Q9H8K7 445 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 RXFP1Q9HBX9 757 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 SAYSD1Q9NPB0 183 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 RAB6BQ9NRW1 208 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 PPARGC1AQ9UBK2 798 aaKnown RBP11.35□□□□□ -0.59
VTI1A-204ENST00000480057 FETUBQ9UGM5 382 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 SFMBT1Q9UHJ3 866 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 XPO7Q9UIA9 1087 aaKnown RBP11.35□□□□□ -0.59
VTI1A-204ENST00000480057 ZMYND8Q9ULU4 1186 aaPredicted RBP11.35□□□□□ -0.59
VTI1A-204ENST00000480057 NEU3Q9UQ49 428 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 ZNF638Q14966 1978 aaKnown RBP11.35□□□□□ -0.59
VTI1A-204ENST00000480057 PCNTO95613 3336 aa11.35□□□□□ -0.59
VTI1A-204ENST00000480057 SPAG6O75602 509 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 TMEM63AO94886 807 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 GSTA2P09210 222 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 MLNP12872 115 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 VAV1P15498 845 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 ATP5DP30049 168 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 PHBP35232 272 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 ALDH1A3P47895 512 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 SARNPP82979 210 aaKnown RBP11.34□□□□□ -0.59
VTI1A-204ENST00000480057 PLD1Q13393 1074 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 VEPH1Q14D04 833 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 RASA2Q15283 850 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 PARP6Q2NL67 630 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 ANKRD20A2Q5SQ80 823 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 ANKRD20A1Q5TYW2 823 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 ANKRD20A3Q5VUR7 823 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 ARHGEF18Q6ZSZ5 1173 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 TCEAL8Q8IYN2 117 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 ATP11CQ8NB49 1132 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 OR2W6PQ8NHA6 318 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 CLP1Q92989 425 aaKnown RBP11.34□□□□□ -0.59
VTI1A-204ENST00000480057 FATE1Q969F0 183 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 TLCD1Q96CP7 247 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 P2RY11Q96G91 374 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 BTN2A3PQ96KV6 586 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 TSGA13Q96PP4 275 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 PRDM10Q9NQV6 1147 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 MRPL17Q9NRX2 175 aaKnown RBP11.34□□□□□ -0.59
VTI1A-204ENST00000480057 MARCH2Q9P0N8 246 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 IGSF9Q9P2J2 1179 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 ADAM21Q9UKJ8 722 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 TRHDEQ9UKU6 1024 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 INSL6Q9Y581 213 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 PTPRSQ13332 1948 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 KIAA1671Q9BY89 1806 aa11.34□□□□□ -0.59
VTI1A-204ENST00000480057 IGLV3-10A0A075B6K4 115 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 E7EVH7 732 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 RNF103O00237 685 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 RASGRF2O14827 1237 aa11.33□□□□□ -0.6
VTI1A-204ENST00000480057 MSI1O43347 362 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms