RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 ACOT1Q86TX2 421 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 ITIH5Q86UX2 942 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.51□□□□□ -1.37
SF3B1-209ENST00000479532 CRYBG2Q8N1P7 616 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 OTUD6BQ8N6M0 293 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 KREMEN2Q8NCW0 462 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 CCDC112Q8NEF3 446 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 OR10T2Q8NGX3 314 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 MYLPFQ96A32 169 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 EXOC4Q96A65 974 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 PABPC5Q96DU9 382 aaKnown RBP6.51□□□□□ -1.37
SF3B1-209ENST00000479532 SMARCD1Q96GM5 515 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 GUCD1Q96NT3 240 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 PGLYRP2Q96PD5 576 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 DNAJC7Q99615 494 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 SEPT5Q99719 369 aaPredicted RBP6.51□□□□□ -1.37
SF3B1-209ENST00000479532 STK33Q9BYT3 514 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 EDEM3Q9BZQ6 932 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 XPO4Q9C0E2 1151 aaKnown RBP6.51□□□□□ -1.37
SF3B1-209ENST00000479532 ELOVL4Q9GZR5 314 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 SDCBP2Q9H190 292 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 CXorf56Q9H5V9 222 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 SFXN1Q9H9B4 322 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 ARGLU1Q9NWB6 273 aaPredicted RBP6.51□□□□□ -1.37
SF3B1-209ENST00000479532 ZDHHC7Q9NXF8 308 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 CLDND1Q9NY35 253 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 EHD2Q9NZN4 543 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 CEP72Q9P209 647 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 FBXW11Q9UKB1 542 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 GTF3C4Q9UKN8 822 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 MYO6Q9UM54 1294 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 COG5Q9UP83 839 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 SIK3Q9Y2K2 1263 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 HCFC2Q9Y5Z7 792 aa6.51□□□□□ -1.37
SF3B1-209ENST00000479532 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.51□□□□□ -1.37
SF3B1-209ENST00000479532 ITIH6Q6UXX5 1313 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 MYBPHLA2RUH7 354 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 RGS13O14921 159 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 ADAM12O43184 909 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 THAP12O43422 761 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 ABLIM3O94929 683 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 FAM200BP0CF97 657 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 H2AFXP16104 143 aaPredicted RBP6.5□□□□□ -1.37
SF3B1-209ENST00000479532 EPCAMP16422 314 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 FERP16591 822 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 ADORA2BP29275 332 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 HOXA9P31269 272 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 KRT9P35527 623 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 SOX5P35711 763 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 MAGEA11P43364 429 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 KLK7P49862 253 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 PDE6CP51160 858 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 RAD23BP54727 409 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 EPHB3P54753 998 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 IRX1P78414 480 aaPredicted RBP6.5□□□□□ -1.37
SF3B1-209ENST00000479532 HYAL1Q12794 435 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 DRAP1Q14919 205 aaPredicted RBP6.5□□□□□ -1.37
SF3B1-209ENST00000479532 CFAP221Q4G0U5 840 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 FIGNQ5HY92 759 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 SPECC1LQ69YQ0 1117 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 ANKRD54Q6NXT1 300 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 GJB7Q6PEY0 223 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 VSTM1Q6UX27 236 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 RSPO2Q6UXX9 243 aaPredicted RBP6.5□□□□□ -1.37
SF3B1-209ENST00000479532 TMEM184AQ6ZMB5 413 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 SCN4BQ8IWT1 228 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 DRC7Q8IY82 874 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 TCEAL8Q8IYN2 117 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 SLC4A11Q8NBS3 891 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 MAFAQ8NHW3 353 aaPredicted RBP6.5□□□□□ -1.37
SF3B1-209ENST00000479532 SLC7A14Q8TBB6 771 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 SLC22A17Q8WUG5 538 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 SHC3Q92529 594 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 ITFG2Q969R8 447 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 CYFIP2Q96F07 1278 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 PCED1BQ96HM7 432 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 CCDC74BQ96LY2 380 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 CEP295NLQ96MC4 621 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 ZNF512Q96ME7 567 aaPredicted RBP6.5□□□□□ -1.37
SF3B1-209ENST00000479532 RIPOR3Q96MK2 946 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 KREMEN1Q96MU8 473 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 SLC6A18Q96N87 628 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 TMEM209Q96SK2 561 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 RTP3Q9BQQ7 232 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 GANQ9H2C0 597 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 DPEP3Q9H4B8 488 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 SIX2Q9NPC8 291 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 NLRC4Q9NPP4 1024 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 CRTAC1Q9NQ79 661 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 FAM49BQ9NUQ9 324 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 ZNHIT6Q9NWK9 470 aaKnown RBP6.5□□□□□ -1.37
SF3B1-209ENST00000479532 UXTQ9UBK9 157 aaPredicted RBP6.5□□□□□ -1.37
SF3B1-209ENST00000479532 HMGXB4Q9UGU5 601 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 FAM50BQ9Y247 325 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 ASB3Q9Y575 518 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 FHOD1Q9Y613 1164 aa6.5□□□□□ -1.37
SF3B1-209ENST00000479532 PTPRDP23468 1912 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.49□□□□□ -1.37
SF3B1-209ENST00000479532 CCDC195A0A1B0GUA6 201 aa6.49□□□□□ -1.37
SF3B1-209ENST00000479532 A0A1W2PQJ5 194 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms