RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 PERM1Q5SV97 790 aa12.81□□□□□ -0.36
HDAC8-217ENST00000478743 CHST9Q7L1S5 443 aa12.81□□□□□ -0.36
HDAC8-217ENST00000478743 TICAM1Q8IUC6 712 aa12.81□□□□□ -0.36
HDAC8-217ENST00000478743 MFSD2AQ8NA29 543 aa12.81□□□□□ -0.36
HDAC8-217ENST00000478743 SNX25Q9H3E2 840 aa12.81□□□□□ -0.36
HDAC8-217ENST00000478743 PARVGQ9HBI0 331 aa12.81□□□□□ -0.36
HDAC8-217ENST00000478743 DMAP1Q9NPF5 467 aaPredicted RBP12.81□□□□□ -0.36
HDAC8-217ENST00000478743 KRT82Q9NSB4 513 aa12.81□□□□□ -0.36
HDAC8-217ENST00000478743 AGO1Q9UL18 857 aaKnown RBP12.81□□□□□ -0.36
HDAC8-217ENST00000478743 NCKAP1Q9Y2A7 1128 aa12.81□□□□□ -0.36
HDAC8-217ENST00000478743 SETD2Q9BYW2 2564 aaPredicted RBP12.81□□□□□ -0.36
HDAC8-217ENST00000478743 F8P00451 2351 aa12.81□□□□□ -0.36
HDAC8-217ENST00000478743 CELSR1Q9NYQ6 3014 aa12.8□□□□□ -0.36
HDAC8-217ENST00000478743 VWA3AA6NCI4 1184 aa12.8□□□□□ -0.36
HDAC8-217ENST00000478743 LRRC72A6NJI9 287 aa12.8□□□□□ -0.36
HDAC8-217ENST00000478743 LATO43561 262 aa12.8□□□□□ -0.36
HDAC8-217ENST00000478743 PIAS2O75928 621 aa12.8□□□□□ -0.36
HDAC8-217ENST00000478743 ITGA2BP08514 1039 aa12.8□□□□□ -0.36
HDAC8-217ENST00000478743 GRNP28799 593 aaKnown RBP12.8□□□□□ -0.36
HDAC8-217ENST00000478743 SGSHP51688 502 aa12.8□□□□□ -0.36
HDAC8-217ENST00000478743 INHBCP55103 352 aa12.8□□□□□ -0.36
HDAC8-217ENST00000478743 GOLGA8FQ08AF8 430 aa12.8□□□□□ -0.36
HDAC8-217ENST00000478743 GOLGA8DPQ0D2H9 430 aa12.8□□□□□ -0.36
HDAC8-217ENST00000478743 KCNAB2Q13303 367 aa12.8□□□□□ -0.36
HDAC8-217ENST00000478743 CST6Q15828 149 aa12.8□□□□□ -0.36
HDAC8-217ENST00000478743 SLFN12LQ6IEE8 588 aa12.8□□□□□ -0.36
HDAC8-217ENST00000478743 ARL14Q8N4G2 192 aa12.8□□□□□ -0.36
HDAC8-217ENST00000478743 WDR36Q8NI36 951 aaKnown RBP12.8□□□□□ -0.36
HDAC8-217ENST00000478743 NOC3LQ8WTT2 800 aaKnown RBP12.8□□□□□ -0.36
HDAC8-217ENST00000478743 CACTINQ8WUQ7 758 aaKnown RBP12.8□□□□□ -0.36
HDAC8-217ENST00000478743 ELMO3Q96BJ8 720 aa12.8□□□□□ -0.36
HDAC8-217ENST00000478743 MYOCQ99972 504 aa12.8□□□□□ -0.36
HDAC8-217ENST00000478743 FBRSQ9HAH7 460 aa12.8□□□□□ -0.36
HDAC8-217ENST00000478743 TLR8Q9NR97 1041 aaKnown RBP12.8□□□□□ -0.36
HDAC8-217ENST00000478743 ABCB8Q9NUT2 735 aa12.8□□□□□ -0.36
HDAC8-217ENST00000478743 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.8□□□□□ -0.36
HDAC8-217ENST00000478743 KCND2Q9NZV8 630 aa12.8□□□□□ -0.36
HDAC8-217ENST00000478743 ADGRG4Q8IZF6 3080 aa12.8□□□□□ -0.36
HDAC8-217ENST00000478743 AP1G2O75843 785 aa12.79□□□□□ -0.36
HDAC8-217ENST00000478743 RARGP13631 454 aa12.79□□□□□ -0.36
HDAC8-217ENST00000478743 CCDC130P13994 396 aa12.79□□□□□ -0.36
HDAC8-217ENST00000478743 TRIM29Q14134 588 aa12.79□□□□□ -0.36
HDAC8-217ENST00000478743 SLC45A4Q5BKX6 768 aa12.79□□□□□ -0.36
HDAC8-217ENST00000478743 C10orf120Q5SQS8 335 aa12.79□□□□□ -0.36
HDAC8-217ENST00000478743 RBM44Q6ZP01 1051 aaKnown RBP12.79□□□□□ -0.36
HDAC8-217ENST00000478743 DYMQ7RTS9 669 aa12.79□□□□□ -0.36
HDAC8-217ENST00000478743 EFL1Q7Z2Z2 1120 aaKnown RBP12.79□□□□□ -0.36
HDAC8-217ENST00000478743 B3GNT8Q7Z7M8 397 aa12.79□□□□□ -0.36
HDAC8-217ENST00000478743 JAMLQ86YT9 394 aa12.79□□□□□ -0.36
HDAC8-217ENST00000478743 MMAAQ8IVH4 418 aaKnown RBP12.79□□□□□ -0.36
HDAC8-217ENST00000478743 FUKQ8N0W3 1084 aa12.79□□□□□ -0.36
HDAC8-217ENST00000478743 OR14C36Q8NHC7 312 aa12.79□□□□□ -0.36
HDAC8-217ENST00000478743 DDI1Q8WTU0 396 aa12.79□□□□□ -0.36
HDAC8-217ENST00000478743 GTF3C6Q969F1 213 aa12.79□□□□□ -0.36
HDAC8-217ENST00000478743 JAKMIP2Q96AA8 810 aa12.79□□□□□ -0.36
HDAC8-217ENST00000478743 CBWD1Q9BRT8 395 aa12.79□□□□□ -0.36
HDAC8-217ENST00000478743 MED10Q9BTT4 135 aa12.79□□□□□ -0.36
HDAC8-217ENST00000478743 SMYD3Q9H7B4 428 aa12.79□□□□□ -0.36
HDAC8-217ENST00000478743 ZNF71Q9NQZ8 489 aaPredicted RBP12.79□□□□□ -0.36
HDAC8-217ENST00000478743 TMPRSS4Q9NRS4 437 aa12.79□□□□□ -0.36
HDAC8-217ENST00000478743 INTS13Q9NVM9 706 aa12.79□□□□□ -0.36
HDAC8-217ENST00000478743 AKAP9Q99996 3911 aa12.78□□□□□ -0.36
HDAC8-217ENST00000478743 CCDC187A0A096LP49 1063 aa12.78□□□□□ -0.36
HDAC8-217ENST00000478743 CPED1A4D0V7 1026 aa12.78□□□□□ -0.36
HDAC8-217ENST00000478743 A8MXQ7 604 aa12.78□□□□□ -0.36
HDAC8-217ENST00000478743 K7ESM1 405 aa12.78□□□□□ -0.36
HDAC8-217ENST00000478743 AGRPO00253 132 aa12.78□□□□□ -0.36
HDAC8-217ENST00000478743 SEMA7AO75326 666 aa12.78□□□□□ -0.36
HDAC8-217ENST00000478743 TACC1O75410 805 aa12.78□□□□□ -0.36
HDAC8-217ENST00000478743 PPP1R37O75864 691 aa12.78□□□□□ -0.36
HDAC8-217ENST00000478743 AGFG2O95081 481 aa12.78□□□□□ -0.36
HDAC8-217ENST00000478743 CST3P01034 146 aaPredicted RBP12.78□□□□□ -0.36
HDAC8-217ENST00000478743 PLA2G4AP47712 749 aa12.78□□□□□ -0.36
HDAC8-217ENST00000478743 PSMD8P48556 350 aa12.78□□□□□ -0.36
HDAC8-217ENST00000478743 CD97P48960 835 aa12.78□□□□□ -0.36
HDAC8-217ENST00000478743 POLE2P56282 527 aa12.78□□□□□ -0.36
HDAC8-217ENST00000478743 MORC3Q14149 939 aa12.78□□□□□ -0.36
HDAC8-217ENST00000478743 ME3Q16798 604 aa12.78□□□□□ -0.36
HDAC8-217ENST00000478743 ZNF542PQ5EBM4 170 aa12.78□□□□□ -0.36
HDAC8-217ENST00000478743 MBLAC2Q68D91 279 aa12.78□□□□□ -0.36
HDAC8-217ENST00000478743 SCD5Q86SK9 330 aa12.78□□□□□ -0.36
HDAC8-217ENST00000478743 C14orf80Q86SX3 495 aa12.78□□□□□ -0.36
HDAC8-217ENST00000478743 DENND1CQ8IV53 801 aa12.78□□□□□ -0.36
HDAC8-217ENST00000478743 GOLGA1Q92805 767 aa12.78□□□□□ -0.36
HDAC8-217ENST00000478743 RAB34Q9BZG1 259 aa12.78□□□□□ -0.36
HDAC8-217ENST00000478743 TM6SF1Q9BZW5 370 aa12.78□□□□□ -0.36
HDAC8-217ENST00000478743 PCIF1Q9H4Z3 704 aa12.78□□□□□ -0.36
HDAC8-217ENST00000478743 BLOC1S4Q9NUP1 217 aa12.78□□□□□ -0.36
HDAC8-217ENST00000478743 NLGN3Q9NZ94 848 aa12.78□□□□□ -0.36
HDAC8-217ENST00000478743 RASAL2Q9UJF2 1139 aa12.78□□□□□ -0.36
HDAC8-217ENST00000478743 HHLA1C9JL84 531 aa12.77□□□□□ -0.37
HDAC8-217ENST00000478743 LIPCP11150 499 aa12.77□□□□□ -0.37
HDAC8-217ENST00000478743 CD70P32970 193 aa12.77□□□□□ -0.37
HDAC8-217ENST00000478743 DRD3P35462 400 aa12.77□□□□□ -0.37
HDAC8-217ENST00000478743 MAP3K7CLP57077 242 aa12.77□□□□□ -0.37
HDAC8-217ENST00000478743 MCM6Q14566 821 aa12.77□□□□□ -0.37
HDAC8-217ENST00000478743 KIAA0907Q7Z7F0 614 aaPredicted RBP12.77□□□□□ -0.37
HDAC8-217ENST00000478743 ZFAND4Q86XD8 727 aa12.77□□□□□ -0.37
HDAC8-217ENST00000478743 SFR1Q86XK3 245 aa12.77□□□□□ -0.37
HDAC8-217ENST00000478743 CCDC83Q8IWF9 413 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms