RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 SNX10Q9Y5X0 201 aa12.12□□□□□ -0.47
PDCD11-204ENST00000478543 CPQQ9Y646 472 aa12.12□□□□□ -0.47
PDCD11-204ENST00000478543 CACNA1IQ9P0X4 2223 aa12.12□□□□□ -0.47
PDCD11-204ENST00000478543 NOTCH4Q99466 2003 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 DCDC2BA2VCK2 349 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 SCAMP3O14828 347 aaKnown RBP12.11□□□□□ -0.47
PDCD11-204ENST00000478543 OLFM2O95897 454 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 APOEP02649 317 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 TUBB4AP04350 444 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 TGM1P22735 817 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 CCR1P32246 355 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 CXCR5P32302 372 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 ADRA1BP35368 520 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 GGCXP38435 758 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 PEX5P50542 639 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 RWDD2BP57060 319 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 NNTQ13423 1086 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 EIF4EBP2Q13542 120 aaPredicted RBP12.11□□□□□ -0.47
PDCD11-204ENST00000478543 KRT81Q14533 505 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 ARL13BQ3SXY8 428 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 ODF2Q5BJF6 829 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 EFHC2Q5JST6 749 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 BRMS1LQ5PSV4 323 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 ERMARDQ5T6L9 678 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 LRRC38Q5VT99 294 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 AADACL2Q6P093 401 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 POTEHQ6S545 545 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 POLNQ7Z5Q5 900 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 PYROXD2Q8N2H3 581 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 WBP2Q969T9 261 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 RNF25Q96BH1 459 aaPredicted RBP12.11□□□□□ -0.47
PDCD11-204ENST00000478543 SLC39A13Q96H72 371 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 ZSWIM3Q96MP5 696 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 FOXQ1Q9C009 403 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.11□□□□□ -0.47
PDCD11-204ENST00000478543 DDX56Q9NY93 547 aaKnown RBP12.11□□□□□ -0.47
PDCD11-204ENST00000478543 WNT16Q9UBV4 365 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 XPO7Q9UIA9 1087 aaKnown RBP12.11□□□□□ -0.47
PDCD11-204ENST00000478543 SNX12Q9UMY4 172 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 DOCK6Q96HP0 2047 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 DENND4CQ5VZ89 1909 aa12.11□□□□□ -0.47
PDCD11-204ENST00000478543 DOCK8Q8NF50 2099 aa12.1□□□□□ -0.47
PDCD11-204ENST00000478543 LRRD1A4D1F6 860 aa12.1□□□□□ -0.47
PDCD11-204ENST00000478543 I6L893 689 aaPredicted RBP12.1□□□□□ -0.47
PDCD11-204ENST00000478543 SRGAP2O75044 1071 aa12.1□□□□□ -0.47
PDCD11-204ENST00000478543 PAGE1O75459 146 aa12.1□□□□□ -0.47
PDCD11-204ENST00000478543 STC2O76061 302 aa12.1□□□□□ -0.47
PDCD11-204ENST00000478543 IGLV3-27P01718 113 aa12.1□□□□□ -0.47
PDCD11-204ENST00000478543 AVPR1AP37288 418 aa12.1□□□□□ -0.47
PDCD11-204ENST00000478543 KPNA1P52294 538 aaPredicted RBP12.1□□□□□ -0.47
PDCD11-204ENST00000478543 CDH6P55285 790 aa12.1□□□□□ -0.47
PDCD11-204ENST00000478543 COG7P83436 770 aa12.1□□□□□ -0.47
PDCD11-204ENST00000478543 PPP2R5DQ14738 602 aa12.1□□□□□ -0.47
PDCD11-204ENST00000478543 LLGL1Q15334 1064 aa12.1□□□□□ -0.47
PDCD11-204ENST00000478543 BOLA3Q53S33 107 aa12.1□□□□□ -0.47
PDCD11-204ENST00000478543 PPP6R3Q5H9R7 873 aaPredicted RBP12.1□□□□□ -0.47
PDCD11-204ENST00000478543 DCAF12L1Q5VU92 463 aa12.1□□□□□ -0.47
PDCD11-204ENST00000478543 CCDC50Q8IVM0 306 aa12.1□□□□□ -0.47
PDCD11-204ENST00000478543 C1orf210Q8IVY1 113 aa12.1□□□□□ -0.47
PDCD11-204ENST00000478543 KATNAL2Q8IYT4 538 aa12.1□□□□□ -0.47
PDCD11-204ENST00000478543 CMTM8Q8IZV2 173 aa12.1□□□□□ -0.47
PDCD11-204ENST00000478543 ATP6V0D2Q8N8Y2 350 aa12.1□□□□□ -0.47
PDCD11-204ENST00000478543 KCTD6Q8NC69 237 aa12.1□□□□□ -0.47
PDCD11-204ENST00000478543 KIF18AQ8NI77 898 aa12.1□□□□□ -0.47
PDCD11-204ENST00000478543 TEKT4Q8WW24 435 aa12.1□□□□□ -0.47
PDCD11-204ENST00000478543 RAPGEF5Q92565 580 aa12.1□□□□□ -0.47
PDCD11-204ENST00000478543 NTAN1Q96AB6 310 aa12.1□□□□□ -0.47
PDCD11-204ENST00000478543 PLD4Q96BZ4 506 aa12.1□□□□□ -0.47
PDCD11-204ENST00000478543 ZFRQ96KR1 1074 aaKnown RBP12.1□□□□□ -0.47
PDCD11-204ENST00000478543 KCTD15Q96SI1 283 aaPredicted RBP12.1□□□□□ -0.47
PDCD11-204ENST00000478543 OSBPL9Q96SU4 736 aa12.1□□□□□ -0.47
PDCD11-204ENST00000478543 SIK2Q9H0K1 926 aa12.1□□□□□ -0.47
PDCD11-204ENST00000478543 ARHGEF38Q9NXL2 777 aa12.1□□□□□ -0.47
PDCD11-204ENST00000478543 CFAP97Q9P2B7 532 aa12.1□□□□□ -0.47
PDCD11-204ENST00000478543 KCNU1A8MYU2 1149 aa12.09□□□□□ -0.47
PDCD11-204ENST00000478543 LEFTY2O00292 366 aa12.09□□□□□ -0.47
PDCD11-204ENST00000478543 STK25O00506 426 aa12.09□□□□□ -0.47
PDCD11-204ENST00000478543 ZNF185O15231 689 aa12.09□□□□□ -0.47
PDCD11-204ENST00000478543 CEP104O60308 925 aa12.09□□□□□ -0.47
PDCD11-204ENST00000478543 URI1O94763 535 aaPredicted RBP12.09□□□□□ -0.47
PDCD11-204ENST00000478543 PRAMEF12O95522 483 aa12.09□□□□□ -0.47
PDCD11-204ENST00000478543 CD48P09326 243 aa12.09□□□□□ -0.47
PDCD11-204ENST00000478543 SLC2A3P11169 496 aa12.09□□□□□ -0.47
PDCD11-204ENST00000478543 PYGMP11217 842 aa12.09□□□□□ -0.47
PDCD11-204ENST00000478543 HOXB3P14651 431 aaPredicted RBP12.09□□□□□ -0.47
PDCD11-204ENST00000478543 PFKLP17858 780 aa12.09□□□□□ -0.47
PDCD11-204ENST00000478543 KDELR1P24390 212 aa12.09□□□□□ -0.47
PDCD11-204ENST00000478543 CORO1AP31146 461 aaKnown RBP12.09□□□□□ -0.47
PDCD11-204ENST00000478543 SLC7A9P82251 487 aa12.09□□□□□ -0.47
PDCD11-204ENST00000478543 ZXDBP98169 803 aa12.09□□□□□ -0.47
PDCD11-204ENST00000478543 RING1Q06587 406 aa12.09□□□□□ -0.47
PDCD11-204ENST00000478543 SEL1L2Q5TEA6 688 aa12.09□□□□□ -0.47
PDCD11-204ENST00000478543 PAPD7Q5XG87 772 aaKnown RBP12.09□□□□□ -0.47
PDCD11-204ENST00000478543 NUGGCQ68CJ6 796 aa12.09□□□□□ -0.47
PDCD11-204ENST00000478543 MFSD7Q6UXD7 560 aa12.09□□□□□ -0.47
PDCD11-204ENST00000478543 OTOP3Q7RTS5 596 aa12.09□□□□□ -0.47
PDCD11-204ENST00000478543 DENND1CQ8IV53 801 aa12.09□□□□□ -0.47
PDCD11-204ENST00000478543 NPAS3Q8IXF0 933 aa12.09□□□□□ -0.47
PDCD11-204ENST00000478543 EXD1Q8NHP7 514 aa12.09□□□□□ -0.47
PDCD11-204ENST00000478543 ZSCAN18Q8TBC5 510 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms