RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 PRKCBP05771 671 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 ZNF28P17035 718 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 ERCC5P28715 1186 aaPredicted RBP5.01□□□□□ -1.61
CKS1B-207ENST00000477676 MAGEA9P43362 315 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 FNTBP49356 437 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 ARHGAP8P85298 464 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 PFKPQ01813 784 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 CREMQ03060 361 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 ST3GAL1Q11201 340 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 GNL2Q13823 731 aaKnown RBP5.01□□□□□ -1.61
CKS1B-207ENST00000477676 TFDP1Q14186 410 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 ST3GAL2Q16842 350 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 CR1LQ2VPA4 569 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 ZNF568Q3ZCX4 644 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 XKR4Q5GH76 650 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 STXBP5Q5T5C0 1151 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 MBLAC2Q68D91 279 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 SLC8B1Q6J4K2 584 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 PKN3Q6P5Z2 889 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 TRMT10BQ6PF06 316 aaKnown RBP5.01□□□□□ -1.61
CKS1B-207ENST00000477676 ZNF852Q6ZMS4 543 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 Q6ZS52 159 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 CATSPER3Q86XQ3 398 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 PPIL6Q8IXY8 311 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 KBTBD2Q8IY47 623 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 FAM177A1Q8N128 213 aaPredicted RBP5.01□□□□□ -1.61
CKS1B-207ENST00000477676 Q8N1Y9 231 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 UBXN4Q92575 508 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 C18orf25Q96B23 403 aaPredicted RBP5.01□□□□□ -1.61
CKS1B-207ENST00000477676 MRGPRX3Q96LB0 322 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 RTKNQ9BST9 563 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 CCSER2Q9H7U1 834 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 TTC12Q9H892 705 aaPredicted RBP5.01□□□□□ -1.61
CKS1B-207ENST00000477676 LMAN1LQ9HAT1 526 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 CAPN10Q9HC96 672 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 PTPRHQ9HD43 1115 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 PRMT7Q9NVM4 692 aaPredicted RBP5.01□□□□□ -1.61
CKS1B-207ENST00000477676 POLR3BQ9NW08 1133 aaPredicted RBP5.01□□□□□ -1.61
CKS1B-207ENST00000477676 GDE1Q9NZC3 331 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 ZDHHC9Q9Y397 364 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 TNFRSF18Q9Y5U5 241 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 ATMQ13315 3056 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 PLXNB3Q9ULL4 1909 aa5.01□□□□□ -1.61
CKS1B-207ENST00000477676 MYH10P35580 1976 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 CFAP46Q8IYW2 2715 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5□□□□□ -1.61
CKS1B-207ENST00000477676 BTBD18B2RXH4 712 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 ACKR2O00590 384 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 CPLX1O14810 134 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 JAK2O60674 1132 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 B3GAT3O94766 335 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 FBXO21O94952 628 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 RETP07949 1114 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 XRCC6P12956 609 aaKnown RBP eCLIP5□□□□□ -1.61
CKS1B-207ENST00000477676 PTPN2P17706 415 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 CCNE1P24864 410 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 PSMA5P28066 241 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 GDI1P31150 447 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 EPHA5P54756 1037 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 NCBP1Q09161 790 aaKnown RBP5□□□□□ -1.61
CKS1B-207ENST00000477676 ELAVL2Q12926 359 aaKnown RBP5□□□□□ -1.61
CKS1B-207ENST00000477676 FOXE3Q13461 319 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 PRPF4BQ13523 1007 aaKnown RBP5□□□□□ -1.61
CKS1B-207ENST00000477676 SF3A2Q15428 464 aaKnown RBP5□□□□□ -1.61
CKS1B-207ENST00000477676 CCDC6Q16204 474 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 FXNQ16595 210 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 CALCRLQ16602 461 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 IGFL4Q6B9Z1 124 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 LAIR1Q6GTX8 287 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 TMC8Q8IU68 726 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 TCEAL8Q8IYN2 117 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 HACE1Q8IYU2 909 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 DAW1Q8N136 415 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 ZNF513Q8N8E2 541 aaPredicted RBP5□□□□□ -1.61
CKS1B-207ENST00000477676 NECAB1Q8N987 351 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 ZNF461Q8TAF7 563 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 DNASE1L2Q92874 299 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 SMARCD2Q92925 531 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 MBD6Q96DN6 1003 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 ZFYVE19Q96K21 471 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 ZBTB45Q96K62 511 aaPredicted RBP5□□□□□ -1.61
CKS1B-207ENST00000477676 NELL2Q99435 816 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 FAM126AQ9BYI3 521 aaPredicted RBP5□□□□□ -1.61
CKS1B-207ENST00000477676 TM6SF1Q9BZW5 370 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 TGIF2Q9GZN2 237 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 EPN3Q9H201 632 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 CDT1Q9H211 546 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 IKZF4Q9H2S9 585 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 SMOC1Q9H4F8 434 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 BRD9Q9H8M2 597 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 TRPV4Q9HBA0 871 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 SEMA4GQ9NTN9 838 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 ACTR10Q9NZ32 417 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 ORC3Q9UBD5 711 aaPredicted RBP5□□□□□ -1.61
CKS1B-207ENST00000477676 MYOTQ9UBF9 498 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 FBXL5Q9UKA1 691 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 PCDHA12Q9UN75 941 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 R3HCC1Q9Y3T6 440 aaKnown RBP5□□□□□ -1.61
CKS1B-207ENST00000477676 INSL5Q9Y5Q6 135 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 CYP46A1Q9Y6A2 500 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms