RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 TAS1R2Q8TE23 839 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 GOLGA1Q92805 767 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 CCDC47Q96A33 483 aaKnown RBP6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 ELF4Q99607 663 aaPredicted RBP6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 BACH2Q9BYV9 841 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 ULBP1Q9BZM6 244 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 FBRSQ9HAH7 460 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 CYP3A43Q9HB55 503 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 APOBEC3GQ9HC16 384 aaKnown RBP6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 PRSS16Q9NQE7 514 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 GDF3Q9NR23 364 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 CISHQ9NSE2 258 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 OLA1Q9NTK5 396 aaKnown RBP6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 WDR70Q9NW82 654 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 HESX1Q9UBX0 185 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 SUN2Q9UH99 717 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 MAPK8IP1Q9UQF2 711 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 USP3Q9Y6I4 520 aa6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 MORC2Q9Y6X9 1032 aaPredicted RBP6.96□□□□□ -1.3
RTFDC1-206ENST00000477485 A0A1B0GTQ1 180 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 GOLGA6L7A0A1B0GV03 622 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 A0A1W2PPC4 97 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 LRRC72A6NJI9 287 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 E9PAM4 449 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 TULP2O00295 520 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 PDXKO00764 312 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 RIOK3O14730 519 aaKnown RBP6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 IKBKBO14920 756 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 VILLO15195 856 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 ATXN7O15265 892 aaPredicted RBP6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 MID1O15344 667 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 TLX3O43711 291 aaPredicted RBP6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 SIN3BO75182 1162 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 DKK1O94907 266 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 IGHV4-34P06331 123 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 DLDP09622 509 aaKnown RBP6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 LCP1P13796 627 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 CD38P28907 300 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 ARRB1P49407 418 aaPredicted RBP6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 RACK1P63244 317 aaKnown RBP6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 ZBTB16Q05516 673 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 PPP3CAQ08209 521 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 SFSWAPQ12872 951 aaKnown RBP6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 CDH18Q13634 790 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 TAF1BQ53T94 588 aaPredicted RBP6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 C1orf220Q5T0J3 134 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 ADGRF1Q5T601 910 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 RNF219Q5W0B1 726 aaPredicted RBP6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 DBX2Q6ZNG2 339 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 INTS8Q75QN2 995 aaKnown RBP6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 ADIPOR2Q86V24 386 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 SLC9A9Q8IVB4 645 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 MMAAQ8IVH4 418 aaKnown RBP6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 CARNMT1Q8N4J0 409 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 ZNF276Q8N554 614 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 SLC4A11Q8NBS3 891 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 OR14C36Q8NHC7 312 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 UBA3Q8TBC4 463 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 WFDC5Q8TCV5 224 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 TATDN2Q93075 761 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 TMEM176AQ96HP8 235 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 NAF1Q96HR8 494 aaKnown RBP6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 SERAC1Q96JX3 654 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 LGMNQ99538 433 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 TMEM245Q9H330 911 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 PABPC3Q9H361 631 aaKnown RBP6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 KCTD10Q9H3F6 313 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 OSGEPQ9NPF4 335 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 DMAC2Q9NW81 257 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 SERGEFQ9UGK8 458 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 TSPAN16Q9UKR8 245 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 PCDHA7Q9UN72 937 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 HBS1LQ9Y450 684 aaKnown RBP6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 RAI2Q9Y5P3 530 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 SMG1Q96Q15 3661 aaKnown RBP6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 HELZ2Q9BYK8 2649 aaKnown RBP6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 ASXL3Q9C0F0 2248 aa6.95□□□□□ -1.3
RTFDC1-206ENST00000477485 TBC1D3DA0A087WVF3 549 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 TBC1D3IA0A087WXS9 549 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 TBC1D3EA0A087X179 549 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 TBC1D3KA0A087X1G2 549 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 TBC1D3FA6NER0 549 aaPredicted RBP6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 YJEFN3A6XGL0 299 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 TBC1D3LB9A6J9 549 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 E7ENQ6 273 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 XPO1O14980 1071 aaKnown RBP6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 YKT6O15498 198 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 KLRC4O43908 158 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 BRINP1O60477 761 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 SDC3O75056 442 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 MOCS2O96007 188 aaPredicted RBP6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 IL1BP01584 269 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 WNT1P04628 370 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 SLFN14P0C7P3 912 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 TBC1D3HP0C7X1 549 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 PYGBP11216 843 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 PLA2G2AP14555 144 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 GLDCP23378 1020 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 RPL13P26373 211 aaKnown RBP6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 MAT2AP31153 395 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms