RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 SEC24AO95486 1093 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 IGLV3-25P01717 112 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 EN2P19622 333 aaPredicted RBP6.83□□□□□ -1.32
CCDC30-209ENST00000477155 TUBP50607 506 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 AIF1P55008 147 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 TBX4P57082 545 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 KCNJ11Q14654 390 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 PAFAH1B3Q15102 231 aaKnown RBP6.83□□□□□ -1.32
CCDC30-209ENST00000477155 MFSD5Q6N075 450 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 TMEM199Q8N511 208 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 COLGALT1Q8NBJ5 622 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 ZNF512Q96ME7 567 aaPredicted RBP6.83□□□□□ -1.32
CCDC30-209ENST00000477155 TLR8Q9NR97 1041 aaKnown RBP6.83□□□□□ -1.32
CCDC30-209ENST00000477155 NDFIP2Q9NV92 336 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 VANGL2Q9ULK5 521 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 EXOC1LA0A1B0GW35 172 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 SLC12A8A0AV02 714 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 PPP1R12AO14974 1030 aaPredicted RBP6.83□□□□□ -1.32
CCDC30-209ENST00000477155 GCATO75600 419 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 ELK3P41970 407 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 RPL10AP62906 217 aaKnown RBP6.83□□□□□ -1.32
CCDC30-209ENST00000477155 EIF4EBP2Q13542 120 aaPredicted RBP6.83□□□□□ -1.32
CCDC30-209ENST00000477155 TAF12Q16514 161 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 PDZD4Q76G19 769 aaPredicted RBP6.83□□□□□ -1.32
CCDC30-209ENST00000477155 TFAP2DQ7Z6R9 452 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 CYP4X1Q8N118 509 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 PDCD7Q8N8D1 485 aaKnown RBP6.83□□□□□ -1.32
CCDC30-209ENST00000477155 ANKLE1Q8NAG6 615 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 USP33Q8TEY7 942 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 SERPINB11Q96P15 392 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 CCDC77Q9BR77 488 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 WDR83Q9BRX9 315 aaKnown RBP6.83□□□□□ -1.32
CCDC30-209ENST00000477155 TRIM56Q9BRZ2 755 aaKnown RBP6.83□□□□□ -1.32
CCDC30-209ENST00000477155 ZBED2Q9BTP6 218 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 CAPS2Q9BXY5 557 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 FOXP3Q9BZS1 431 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 NACA2Q9H009 215 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 ARHGEF38Q9NXL2 777 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.83□□□□□ -1.32
CCDC30-209ENST00000477155 MARCH2Q9P0N8 246 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 MTRRQ9UBK8 725 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 TTLL3Q9Y4R7 772 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 HS3ST4Q9Y661 456 aa6.83□□□□□ -1.32
CCDC30-209ENST00000477155 C5orf60A6NFR6 353 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 SLC38A8A6NNN8 435 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 TLR5O60602 858 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 RTN3O95197 1032 aaPredicted RBP6.82□□□□□ -1.32
CCDC30-209ENST00000477155 CREB1P16220 341 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 GPX6P59796 221 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 GNGT1P63211 74 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 OLIG2Q13516 323 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 SPARCL1Q14515 664 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 SLC8B1Q6J4K2 584 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 ARHGAP36Q6ZRI8 547 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 C16orf59Q7L2K0 433 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 ZNF567Q8N184 647 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 ZNF689Q96CS4 500 aaPredicted RBP6.82□□□□□ -1.32
CCDC30-209ENST00000477155 RTP4Q96DX8 246 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 SERPINB12Q96P63 405 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 SELENOSQ9BQE4 189 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.82□□□□□ -1.32
CCDC30-209ENST00000477155 KLHL8Q9P2G9 620 aaPredicted RBP6.82□□□□□ -1.32
CCDC30-209ENST00000477155 MAD1L1Q9Y6D9 718 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 A0A087WUV0 522 aaPredicted RBP6.82□□□□□ -1.32
CCDC30-209ENST00000477155 A0A0A0MRY4 1105 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 CHADO15335 359 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 STK10O94804 968 aaKnown RBP6.82□□□□□ -1.32
CCDC30-209ENST00000477155 SOD2P04179 222 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 HSPA1AP0DMV8 641 aaKnown RBP6.82□□□□□ -1.32
CCDC30-209ENST00000477155 HSPA1BP0DMV9 641 aaKnown RBP6.82□□□□□ -1.32
CCDC30-209ENST00000477155 PSMB4P28070 264 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 RFC2P35250 354 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 HCAR3P49019 387 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 MLLT6P55198 1093 aaPredicted RBP6.82□□□□□ -1.32
CCDC30-209ENST00000477155 WASHC5Q12768 1159 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 EFTUD2Q15029 972 aaKnown RBP eCLIP6.82□□□□□ -1.32
CCDC30-209ENST00000477155 BRMS1LQ5PSV4 323 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 AGBL2Q5U5Z8 902 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 BEND5Q7L4P6 421 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 SLC39A11Q8N1S5 342 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 ZNF461Q8TAF7 563 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 CFAP36Q96G28 342 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 SPATA13Q96N96 652 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 HAPLN3Q96S86 360 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 FERMT1Q9BQL6 677 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 OSBPL2Q9H1P3 480 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 SPG21Q9NZD8 308 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 UBP1Q9NZI7 540 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 CXXC1Q9P0U4 656 aaPredicted RBP6.82□□□□□ -1.32
CCDC30-209ENST00000477155 CLUHO75153 1309 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 CHD7Q9P2D1 2997 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 SHROOM3Q8TF72 1996 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 KCNU1A8MYU2 1149 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 HACD1B0YJ81 288 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 E9PAM4 449 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 PRRG1O14668 218 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 NDC80O14777 642 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 SCAMP3O14828 347 aaKnown RBP6.82□□□□□ -1.32
CCDC30-209ENST00000477155 KIAA0355O15063 1070 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 USP12O75317 370 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms