RNA–Protein interactions for RNA: ENST00000477119.1

APTX-221, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-221ENST00000477119 APBA1Q02410 837 aa13.91□□□□□ -0.18
APTX-221ENST00000477119 TRIM65Q6PJ69 517 aa13.91□□□□□ -0.18
APTX-221ENST00000477119 GBP6Q6ZN66 633 aa13.91□□□□□ -0.18
APTX-221ENST00000477119 BEND5Q7L4P6 421 aa13.91□□□□□ -0.18
APTX-221ENST00000477119 TMEM110Q86TL2 294 aa13.91□□□□□ -0.18
APTX-221ENST00000477119 TAC4Q86UU9 113 aa13.91□□□□□ -0.18
APTX-221ENST00000477119 MFN1Q8IWA4 741 aa13.91□□□□□ -0.18
APTX-221ENST00000477119 CCDC117Q8IWD4 279 aaPredicted RBP13.91□□□□□ -0.18
APTX-221ENST00000477119 CARNMT1Q8N4J0 409 aa13.91□□□□□ -0.18
APTX-221ENST00000477119 ZCCHC9Q8N567 271 aaKnown RBP13.91□□□□□ -0.18
APTX-221ENST00000477119 ZNF557Q8N988 423 aaPredicted RBP13.91□□□□□ -0.18
APTX-221ENST00000477119 FIBINQ8TAL6 211 aa13.91□□□□□ -0.18
APTX-221ENST00000477119 SLC39A13Q96H72 371 aa13.91□□□□□ -0.18
APTX-221ENST00000477119 FAM81BQ96LP2 452 aa13.91□□□□□ -0.18
APTX-221ENST00000477119 PRICKLE1Q96MT3 831 aaPredicted RBP13.91□□□□□ -0.18
APTX-221ENST00000477119 TRIM62Q9BVG3 475 aa13.91□□□□□ -0.18
APTX-221ENST00000477119 NUCKS1Q9H1E3 243 aaKnown RBP13.91□□□□□ -0.18
APTX-221ENST00000477119 LHX5Q9H2C1 402 aa13.91□□□□□ -0.18
APTX-221ENST00000477119 PRSS16Q9NQE7 514 aa13.91□□□□□ -0.18
APTX-221ENST00000477119 DNAAF2Q9NVR5 837 aaKnown RBP13.91□□□□□ -0.18
APTX-221ENST00000477119 CYTH4Q9UIA0 394 aa13.91□□□□□ -0.18
APTX-221ENST00000477119 EPG5Q9HCE0 2579 aa13.9□□□□□ -0.18
APTX-221ENST00000477119 NUP205Q92621 2012 aa13.9□□□□□ -0.18
APTX-221ENST00000477119 TYW5A2RUC4 315 aaKnown RBP13.9□□□□□ -0.18
APTX-221ENST00000477119 BECN2A8MW95 431 aa13.9□□□□□ -0.18
APTX-221ENST00000477119 CD59P13987 128 aa13.9□□□□□ -0.18
APTX-221ENST00000477119 RPS14P62263 151 aaKnown RBP13.9□□□□□ -0.18
APTX-221ENST00000477119 GRIK2Q13002 908 aa13.9□□□□□ -0.18
APTX-221ENST00000477119 NNTQ13423 1086 aa13.9□□□□□ -0.18
APTX-221ENST00000477119 TAF5Q15542 800 aa13.9□□□□□ -0.18
APTX-221ENST00000477119 MEA1Q16626 185 aa13.9□□□□□ -0.18
APTX-221ENST00000477119 ZC3H12AQ5D1E8 599 aaKnown RBP13.9□□□□□ -0.18
APTX-221ENST00000477119 MS4A13Q5J8X5 152 aa13.9□□□□□ -0.18
APTX-221ENST00000477119 IRF2BP1Q8IU81 584 aa13.9□□□□□ -0.18
APTX-221ENST00000477119 MLKLQ8NB16 471 aa13.9□□□□□ -0.18
APTX-221ENST00000477119 LMLNQ96KR4 655 aa13.9□□□□□ -0.18
APTX-221ENST00000477119 MTG2Q9H4K7 406 aa13.9□□□□□ -0.18
APTX-221ENST00000477119 THAP9Q9H5L6 903 aa13.9□□□□□ -0.18
APTX-221ENST00000477119 POPDC2Q9HBU9 364 aa13.9□□□□□ -0.18
APTX-221ENST00000477119 APEX2Q9UBZ4 518 aa13.9□□□□□ -0.18
APTX-221ENST00000477119 SUN2Q9UH99 717 aa13.9□□□□□ -0.18
APTX-221ENST00000477119 EIF2B4Q9UI10 523 aaKnown RBP13.9□□□□□ -0.18
APTX-221ENST00000477119 XPO7Q9UIA9 1087 aaKnown RBP13.9□□□□□ -0.18
APTX-221ENST00000477119 WASF3Q9UPY6 502 aa13.9□□□□□ -0.18
APTX-221ENST00000477119 NFE2L3Q9Y4A8 694 aa13.9□□□□□ -0.18
APTX-221ENST00000477119 LAMA1P25391 3075 aa13.89□□□□□ -0.19
APTX-221ENST00000477119 CNOT1A5YKK6 2376 aaKnown RBP13.89□□□□□ -0.19
APTX-221ENST00000477119 MYO18AQ92614 2054 aaKnown RBP13.89□□□□□ -0.19
APTX-221ENST00000477119 BCAT2O15382 392 aaPredicted RBP13.89□□□□□ -0.19
APTX-221ENST00000477119 SH3BP5O60239 455 aa13.89□□□□□ -0.19
APTX-221ENST00000477119 TRUB2O95900 331 aaKnown RBP13.89□□□□□ -0.19
APTX-221ENST00000477119 APOEP02649 317 aa13.89□□□□□ -0.19
APTX-221ENST00000477119 DNTTP04053 509 aa13.89□□□□□ -0.19
APTX-221ENST00000477119 PON1P27169 355 aa13.89□□□□□ -0.19
APTX-221ENST00000477119 ACSL1P33121 698 aa13.89□□□□□ -0.19
APTX-221ENST00000477119 CSKP41240 450 aa13.89□□□□□ -0.19
APTX-221ENST00000477119 MTIF2P46199 727 aaKnown RBP13.89□□□□□ -0.19
APTX-221ENST00000477119 ST8SIA6P61647 398 aa13.89□□□□□ -0.19
APTX-221ENST00000477119 ZBTB16Q05516 673 aa13.89□□□□□ -0.19
APTX-221ENST00000477119 PDCLQ13371 301 aa13.89□□□□□ -0.19
APTX-221ENST00000477119 CDH18Q13634 790 aa13.89□□□□□ -0.19
APTX-221ENST00000477119 TPD52L1Q16890 204 aaPredicted RBP13.89□□□□□ -0.19
APTX-221ENST00000477119 EXOC3L4Q17RC7 722 aa13.89□□□□□ -0.19
APTX-221ENST00000477119 DCAF6Q58WW2 860 aa13.89□□□□□ -0.19
APTX-221ENST00000477119 FSCBQ5H9T9 825 aa13.89□□□□□ -0.19
APTX-221ENST00000477119 RAP1GAP2Q684P5 730 aa13.89□□□□□ -0.19
APTX-221ENST00000477119 MMS22LQ6ZRQ5 1243 aa13.89□□□□□ -0.19
APTX-221ENST00000477119 LGI2Q8N0V4 545 aa13.89□□□□□ -0.19
APTX-221ENST00000477119 WDTC1Q8N5D0 677 aa13.89□□□□□ -0.19
APTX-221ENST00000477119 TTC17Q96AE7 1141 aa13.89□□□□□ -0.19
APTX-221ENST00000477119 CAMK1GQ96NX5 476 aa13.89□□□□□ -0.19
APTX-221ENST00000477119 SCNM1Q9BWG6 230 aa13.89□□□□□ -0.19
APTX-221ENST00000477119 ZDHHC5Q9C0B5 715 aa13.89□□□□□ -0.19
APTX-221ENST00000477119 C6orf106Q9H6K1 298 aaPredicted RBP13.89□□□□□ -0.19
APTX-221ENST00000477119 FBRSQ9HAH7 460 aa13.89□□□□□ -0.19
APTX-221ENST00000477119 TJP2Q9UDY2 1190 aa13.89□□□□□ -0.19
APTX-221ENST00000477119 INTS6Q9UL03 887 aaKnown RBP13.89□□□□□ -0.19
APTX-221ENST00000477119 CHD8Q9HCK8 2581 aa13.89□□□□□ -0.19
APTX-221ENST00000477119 PLXND1Q9Y4D7 1925 aa13.88□□□□□ -0.19
APTX-221ENST00000477119 TNRC6BQ9UPQ9 1833 aaKnown RBP13.88□□□□□ -0.19
APTX-221ENST00000477119 C1QTNF9BB2RNN3 333 aa13.88□□□□□ -0.19
APTX-221ENST00000477119 H0Y626 953 aa13.88□□□□□ -0.19
APTX-221ENST00000477119 ASLP04424 464 aa13.88□□□□□ -0.19
APTX-221ENST00000477119 PROS1P07225 676 aa13.88□□□□□ -0.19
APTX-221ENST00000477119 C1QTNF9P0C862 333 aa13.88□□□□□ -0.19
APTX-221ENST00000477119 TACR2P21452 398 aa13.88□□□□□ -0.19
APTX-221ENST00000477119 FAM193AP78312 1265 aa13.88□□□□□ -0.19
APTX-221ENST00000477119 PITX1P78337 314 aaPredicted RBP13.88□□□□□ -0.19
APTX-221ENST00000477119 SLC14A1Q13336 389 aa13.88□□□□□ -0.19
APTX-221ENST00000477119 CHSY1Q86X52 802 aa13.88□□□□□ -0.19
APTX-221ENST00000477119 PASD1Q8IV76 773 aa13.88□□□□□ -0.19
APTX-221ENST00000477119 GANCQ8TET4 914 aa13.88□□□□□ -0.19
APTX-221ENST00000477119 SHC3Q92529 594 aa13.88□□□□□ -0.19
APTX-221ENST00000477119 SNX19Q92543 992 aa13.88□□□□□ -0.19
APTX-221ENST00000477119 PPP1R13BQ96KQ4 1090 aa13.88□□□□□ -0.19
APTX-221ENST00000477119 BTN2A3PQ96KV6 586 aa13.88□□□□□ -0.19
APTX-221ENST00000477119 BTBD1Q9H0C5 482 aa13.88□□□□□ -0.19
APTX-221ENST00000477119 PCED1AQ9H1Q7 454 aa13.88□□□□□ -0.19
APTX-221ENST00000477119 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.88□□□□□ -0.19
APTX-221ENST00000477119 CHMP5Q9NZZ3 219 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms