RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 FAIMQ9NVQ4 179 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 ZDHHC7Q9NXF8 308 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 DDX56Q9NY93 547 aaKnown RBP8.63□□□□□ -1.03
VAPB-205ENST00000476395 KIAA1522Q9P206 1035 aaPredicted RBP8.63□□□□□ -1.03
VAPB-205ENST00000476395 FAF1Q9UNN5 650 aaPredicted RBP8.63□□□□□ -1.03
VAPB-205ENST00000476395 WDR37Q9Y2I8 494 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 CEPT1Q9Y6K0 416 aa8.63□□□□□ -1.03
VAPB-205ENST00000476395 SBF1O95248 1867 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 PDCD11Q14690 1871 aaKnown RBP8.62□□□□□ -1.03
VAPB-205ENST00000476395 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.62□□□□□ -1.03
VAPB-205ENST00000476395 LRRIQ4A6NIV6 560 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 K7ERI5 159 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 FBP2O00757 339 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 KLF11O14901 512 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 B4GALT5O43286 388 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 UBA1P22314 1058 aaKnown RBP8.62□□□□□ -1.03
VAPB-205ENST00000476395 MAP1SQ66K74 1059 aaPredicted RBP8.62□□□□□ -1.03
VAPB-205ENST00000476395 OGFOD2Q6N063 350 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 TMEM214Q6NUQ4 689 aaKnown RBP8.62□□□□□ -1.03
VAPB-205ENST00000476395 SCARA5Q6ZMJ2 495 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 MAVSQ7Z434 540 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 NANOGNBQ7Z5D8 188 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 USP37Q86T82 979 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 RSPH3Q86UC2 560 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 PLD5Q8N7P1 536 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 ATP11CQ8NB49 1132 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 DCUN1D1Q96GG9 259 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 CCDC106Q9BWC9 280 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 ZNF518BQ9C0D4 1074 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 NIF3L1Q9GZT8 377 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 PPCSQ9HAB8 311 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 GINM1Q9NU53 330 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 SCN1AP35498 2009 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 IGKV6-21A0A0C4DH24 114 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 APOC4-APOC2K7ER74 178 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 SOCS7O14512 581 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 SNNO75324 88 aaPredicted RBP8.62□□□□□ -1.03
VAPB-205ENST00000476395 LYPLA1O75608 230 aaPredicted RBP8.62□□□□□ -1.03
VAPB-205ENST00000476395 CRTAMO95727 393 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 APOC2P02655 101 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 PORP16435 677 aaPredicted RBP8.62□□□□□ -1.03
VAPB-205ENST00000476395 PTPRAP18433 802 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 CTBSQ01459 385 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 RELAQ04206 551 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 PDE1CQ14123 709 aaPredicted RBP8.62□□□□□ -1.03
VAPB-205ENST00000476395 NOMO1Q15155 1222 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 TGFBIQ15582 683 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 ZBTB33Q86T24 672 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 MPP5Q8N3R9 675 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 TMCO5AQ8N6Q1 288 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 RNF148Q8N7C7 305 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 NSUN6Q8TEA1 469 aaKnown RBP8.62□□□□□ -1.03
VAPB-205ENST00000476395 PYROXD1Q8WU10 500 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 C12orf42Q96LP6 360 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 ZNF302Q9NR11 478 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 TAGLN3Q9UI15 199 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 PABPN1LA6NDY0 278 aaKnown RBP8.62□□□□□ -1.03
VAPB-205ENST00000476395 ADCY6O43306 1168 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 MAFO75444 373 aaPredicted RBP8.62□□□□□ -1.03
VAPB-205ENST00000476395 ARIH2O95376 493 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 CSH1P0DML2 217 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 CSH2P0DML3 217 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 GMPRP36959 345 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 GPD2P43304 727 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 MAGEA6P43360 314 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 CDH15P55291 814 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 DMPKQ09013 629 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 HIC1Q14526 733 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 DCAF6Q58WW2 860 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 DALRD3Q5D0E6 543 aaKnown RBP8.62□□□□□ -1.03
VAPB-205ENST00000476395 C6orf163Q5TEZ5 329 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 SLC2A7Q6PXP3 512 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 FASTKD5Q7L8L6 764 aaKnown RBP8.62□□□□□ -1.03
VAPB-205ENST00000476395 PATL1Q86TB9 770 aaKnown RBP8.62□□□□□ -1.03
VAPB-205ENST00000476395 NUP93Q8N1F7 819 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 ICA1LQ8NDH6 482 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 CCDC28BQ9BUN5 200 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 SLC13A1Q9BZW2 595 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 SIRPGQ9P1W8 387 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 EMCNQ9ULC0 261 aa8.62□□□□□ -1.03
VAPB-205ENST00000476395 FUCA1P04066 466 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 SRGAP2CP0DJJ0 459 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 SRGAP2BP0DMP2 458 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 TFE3P19532 575 aaPredicted RBP8.61□□□□□ -1.03
VAPB-205ENST00000476395 EDNRBP24530 442 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 PRKCHP24723 683 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 ADORA2AP29274 412 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 VWA5B1Q5TIE3 1220 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 EEF1DP3Q658K8 133 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 CDR2LQ86X02 465 aaPredicted RBP8.61□□□□□ -1.03
VAPB-205ENST00000476395 ADGRF2Q8IZF7 708 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 ARHGAP24Q8N264 748 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 IFT122Q9HBG6 1241 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 COMMD8Q9NX08 183 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 DTNAQ9Y4J8 743 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 AP4B1Q9Y6B7 739 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 POLR2AP24928 1970 aaKnown RBP8.61□□□□□ -1.03
VAPB-205ENST00000476395 CARNS1A5YM72 827 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 E9PBE3 544 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 FKBP6O75344 327 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms