RNA–Protein interactions for RNA: ENST00000475818.5

HDAC11-217, Transcript of histone deacetylase 11, humanhuman

TSL 3

Gene HDAC11, Length 1,271 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-217ENST00000475818 SIN3BO75182 1162 aa21.11■□□□□ 0.97
HDAC11-217ENST00000475818 ATP5BP06576 529 aaKnown RBP21.11■□□□□ 0.97
HDAC11-217ENST00000475818 POLR2EP19388 210 aaKnown RBP21.11■□□□□ 0.97
HDAC11-217ENST00000475818 RXRGP48443 463 aa21.11■□□□□ 0.97
HDAC11-217ENST00000475818 AP3M2P53677 418 aa21.11■□□□□ 0.97
HDAC11-217ENST00000475818 SRSF1Q07955 248 aaKnown RBP eCLIP21.11■□□□□ 0.97
HDAC11-217ENST00000475818 PDE4CQ08493 712 aa21.11■□□□□ 0.97
HDAC11-217ENST00000475818 VAC14Q08AM6 782 aa21.11■□□□□ 0.97
HDAC11-217ENST00000475818 CST6Q15828 149 aa21.11■□□□□ 0.97
HDAC11-217ENST00000475818 SGSM1Q2NKQ1 1148 aa21.11■□□□□ 0.97
HDAC11-217ENST00000475818 KIAA1614Q5VZ46 1190 aa21.11■□□□□ 0.97
HDAC11-217ENST00000475818 SPATS2Q86XZ4 545 aaKnown RBP21.11■□□□□ 0.97
HDAC11-217ENST00000475818 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.11■□□□□ 0.97
HDAC11-217ENST00000475818 WFDC5Q8TCV5 224 aa21.11■□□□□ 0.97
HDAC11-217ENST00000475818 PARD3BQ8TEW8 1205 aa21.11■□□□□ 0.97
HDAC11-217ENST00000475818 PLD4Q96BZ4 506 aa21.11■□□□□ 0.97
HDAC11-217ENST00000475818 TMA16Q96EY4 203 aaKnown RBP21.11■□□□□ 0.97
HDAC11-217ENST00000475818 OMDQ99983 421 aa21.11■□□□□ 0.97
HDAC11-217ENST00000475818 TRIM38O00635 465 aa21.1■□□□□ 0.97
HDAC11-217ENST00000475818 SIGLEC6O43699 453 aa21.1■□□□□ 0.97
HDAC11-217ENST00000475818 RNASEH1O60930 286 aaKnown RBP21.1■□□□□ 0.97
HDAC11-217ENST00000475818 CD70P32970 193 aa21.1■□□□□ 0.97
HDAC11-217ENST00000475818 SGSHP51688 502 aa21.1■□□□□ 0.97
HDAC11-217ENST00000475818 YWHAGP61981 247 aaKnown RBP eCLIP21.1■□□□□ 0.97
HDAC11-217ENST00000475818 DAB2P98082 770 aa21.1■□□□□ 0.97
HDAC11-217ENST00000475818 E2F1Q01094 437 aa21.1■□□□□ 0.97
HDAC11-217ENST00000475818 SLC45A4Q5BKX6 768 aa21.1■□□□□ 0.97
HDAC11-217ENST00000475818 KIAA0907Q7Z7F0 614 aaPredicted RBP21.1■□□□□ 0.97
HDAC11-217ENST00000475818 MMAAQ8IVH4 418 aaKnown RBP21.1■□□□□ 0.97
HDAC11-217ENST00000475818 OXR1Q8N573 874 aa21.1■□□□□ 0.97
HDAC11-217ENST00000475818 NT5C1AQ9BXI3 368 aa21.1■□□□□ 0.97
HDAC11-217ENST00000475818 DUSP16Q9BY84 665 aa21.1■□□□□ 0.97
HDAC11-217ENST00000475818 SCML1Q9UN30 329 aa21.1■□□□□ 0.97
HDAC11-217ENST00000475818 PTPN13Q12923 2485 aa21.1■□□□□ 0.97
HDAC11-217ENST00000475818 VPS37CA5D8V6 355 aaPredicted RBP21.09■□□□□ 0.97
HDAC11-217ENST00000475818 CSRP3P50461 194 aa21.09■□□□□ 0.97
HDAC11-217ENST00000475818 CCR5P51681 352 aa21.09■□□□□ 0.97
HDAC11-217ENST00000475818 SNRPFP62306 86 aaKnown RBP21.09■□□□□ 0.97
HDAC11-217ENST00000475818 DLG4P78352 724 aa21.09■□□□□ 0.97
HDAC11-217ENST00000475818 TRIP4Q15650 581 aaPredicted RBP21.09■□□□□ 0.97
HDAC11-217ENST00000475818 FAM173BQ6P4H8 233 aa21.09■□□□□ 0.97
HDAC11-217ENST00000475818 TNMDQ9H2S6 317 aa21.09■□□□□ 0.97
HDAC11-217ENST00000475818 ERVMER34-1Q9H9K5 563 aa21.09■□□□□ 0.97
HDAC11-217ENST00000475818 UBE4BO95155 1302 aa21.08■□□□□ 0.97
HDAC11-217ENST00000475818 USP12O75317 370 aa21.08■□□□□ 0.97
HDAC11-217ENST00000475818 CD58P19256 250 aa21.08■□□□□ 0.97
HDAC11-217ENST00000475818 HARS2P49590 506 aaKnown RBP21.08■□□□□ 0.97
HDAC11-217ENST00000475818 PPP2CBP62714 309 aa21.08■□□□□ 0.97
HDAC11-217ENST00000475818 PPP2CAP67775 309 aa21.08■□□□□ 0.97
HDAC11-217ENST00000475818 CLDN10P78369 228 aa21.08■□□□□ 0.97
HDAC11-217ENST00000475818 SFSWAPQ12872 951 aaKnown RBP21.08■□□□□ 0.97
HDAC11-217ENST00000475818 PPP1R26Q5T8A7 1209 aaPredicted RBP21.08■□□□□ 0.97
HDAC11-217ENST00000475818 ARHGAP18Q8N392 663 aa21.08■□□□□ 0.97
HDAC11-217ENST00000475818 OR14C36Q8NHC7 312 aa21.08■□□□□ 0.97
HDAC11-217ENST00000475818 MYO19Q96H55 970 aa21.08■□□□□ 0.97
HDAC11-217ENST00000475818 VCPIP1Q96JH7 1222 aa21.08■□□□□ 0.97
HDAC11-217ENST00000475818 CD2BP2O95400 341 aaKnown RBP21.07■□□□□ 0.96
HDAC11-217ENST00000475818 ASS1P00966 412 aaKnown RBP21.07■□□□□ 0.96
HDAC11-217ENST00000475818 RPN1P04843 607 aaKnown RBP21.07■□□□□ 0.96
HDAC11-217ENST00000475818 SLC8A1P32418 973 aa21.07■□□□□ 0.96
HDAC11-217ENST00000475818 PIK3CAP42336 1068 aa21.07■□□□□ 0.96
HDAC11-217ENST00000475818 PSMD8P48556 350 aa21.07■□□□□ 0.96
HDAC11-217ENST00000475818 ST8SIA6P61647 398 aa21.07■□□□□ 0.96
HDAC11-217ENST00000475818 INCA1Q0VD86 236 aa21.07■□□□□ 0.96
HDAC11-217ENST00000475818 C12orf56Q8IXR9 622 aa21.07■□□□□ 0.96
HDAC11-217ENST00000475818 LSMEM2Q8N112 164 aa21.07■□□□□ 0.96
HDAC11-217ENST00000475818 NDRG1Q92597 394 aaKnown RBP21.07■□□□□ 0.96
HDAC11-217ENST00000475818 TAF4BQ92750 862 aa21.07■□□□□ 0.96
HDAC11-217ENST00000475818 LRRC27Q9C0I9 530 aa21.07■□□□□ 0.96
HDAC11-217ENST00000475818 TFIP11Q9UBB9 837 aaKnown RBP21.07■□□□□ 0.96
HDAC11-217ENST00000475818 FZD4Q9ULV1 537 aa21.07■□□□□ 0.96
HDAC11-217ENST00000475818 ADPRHP54922 357 aa21.06■□□□□ 0.96
HDAC11-217ENST00000475818 ERVPABLB-1P60509 514 aa21.06■□□□□ 0.96
HDAC11-217ENST00000475818 HNRNPA1L2Q32P51 320 aaKnown RBP21.06■□□□□ 0.96
HDAC11-217ENST00000475818 ZACNQ401N2 412 aa21.06■□□□□ 0.96
HDAC11-217ENST00000475818 NAPEPLDQ6IQ20 393 aa21.06■□□□□ 0.96
HDAC11-217ENST00000475818 TMC6Q7Z403 805 aa21.06■□□□□ 0.96
HDAC11-217ENST00000475818 AADATQ8N5Z0 425 aa21.06■□□□□ 0.96
HDAC11-217ENST00000475818 DEPDC7Q96QD5 511 aa21.06■□□□□ 0.96
HDAC11-217ENST00000475818 DPH1Q9BZG8 443 aa21.06■□□□□ 0.96
HDAC11-217ENST00000475818 POLR1BQ9H9Y6 1135 aa21.06■□□□□ 0.96
HDAC11-217ENST00000475818 KBTBD4Q9NVX7 518 aa21.06■□□□□ 0.96
HDAC11-217ENST00000475818 IL17BQ9UHF5 180 aa21.06■□□□□ 0.96
HDAC11-217ENST00000475818 SFMBT1Q9UHJ3 866 aa21.06■□□□□ 0.96
HDAC11-217ENST00000475818 HEMK1Q9Y5R4 338 aaPredicted RBP21.06■□□□□ 0.96
HDAC11-217ENST00000475818 ARID1BQ8NFD5 2236 aaPredicted RBP21.05■□□□□ 0.96
HDAC11-217ENST00000475818 C10orf142B7Z368 130 aa21.05■□□□□ 0.96
HDAC11-217ENST00000475818 OPA1O60313 960 aa21.05■□□□□ 0.96
HDAC11-217ENST00000475818 TBL1XO60907 577 aa21.05■□□□□ 0.96
HDAC11-217ENST00000475818 CSO75390 466 aaKnown RBP21.05■□□□□ 0.96
HDAC11-217ENST00000475818 DXOO77932 396 aaKnown RBP21.05■□□□□ 0.96
HDAC11-217ENST00000475818 HLA-DRAP01903 254 aa21.05■□□□□ 0.96
HDAC11-217ENST00000475818 LSSP48449 732 aa21.05■□□□□ 0.96
HDAC11-217ENST00000475818 ZNF445P59923 1031 aa21.05■□□□□ 0.96
HDAC11-217ENST00000475818 NFATC3Q12968 1075 aa21.05■□□□□ 0.96
HDAC11-217ENST00000475818 ZNF211Q13398 564 aaPredicted RBP21.05■□□□□ 0.96
HDAC11-217ENST00000475818 ZNF394Q53GI3 561 aa21.05■□□□□ 0.96
HDAC11-217ENST00000475818 ADGRF1Q5T601 910 aa21.05■□□□□ 0.96
HDAC11-217ENST00000475818 C9orf64Q5T6V5 341 aa21.05■□□□□ 0.96
HDAC11-217ENST00000475818 CDCP2Q5VXM1 449 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms