RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 CIR1Q86X95 450 aaPredicted RBP18.68■□□□□ 0.58
ATG4B-217ENST00000475693 DENND1CQ8IV53 801 aa18.68■□□□□ 0.58
ATG4B-217ENST00000475693 ZFRQ96KR1 1074 aaKnown RBP18.68■□□□□ 0.58
ATG4B-217ENST00000475693 ZNF670Q9BS34 389 aa18.68■□□□□ 0.58
ATG4B-217ENST00000475693 TRIM31Q9BZY9 425 aa18.68■□□□□ 0.58
ATG4B-217ENST00000475693 OLA1Q9NTK5 396 aaKnown RBP18.68■□□□□ 0.58
ATG4B-217ENST00000475693 NDFIP2Q9NV92 336 aa18.68■□□□□ 0.58
ATG4B-217ENST00000475693 UXTQ9UBK9 157 aaPredicted RBP18.68■□□□□ 0.58
ATG4B-217ENST00000475693 GOLGA6L10A0A0M3HER8 536 aa18.68■□□□□ 0.58
ATG4B-217ENST00000475693 DAPK3O43293 454 aa18.68■□□□□ 0.58
ATG4B-217ENST00000475693 ETS1P14921 441 aa18.68■□□□□ 0.58
ATG4B-217ENST00000475693 EPHB2P29323 1055 aa18.68■□□□□ 0.58
ATG4B-217ENST00000475693 PTPN7P35236 360 aa18.68■□□□□ 0.58
ATG4B-217ENST00000475693 ARL4AP40617 200 aa18.68■□□□□ 0.58
ATG4B-217ENST00000475693 PPP2R5DQ14738 602 aa18.68■□□□□ 0.58
ATG4B-217ENST00000475693 MS4A13Q5J8X5 152 aa18.68■□□□□ 0.58
ATG4B-217ENST00000475693 NCBP2-AS2Q69YL0 99 aa18.68■□□□□ 0.58
ATG4B-217ENST00000475693 PDE12Q6L8Q7 609 aaKnown RBP18.68■□□□□ 0.58
ATG4B-217ENST00000475693 C8orf74Q6P047 294 aa18.68■□□□□ 0.58
ATG4B-217ENST00000475693 DDX42Q86XP3 938 aaKnown RBP eCLIP18.68■□□□□ 0.58
ATG4B-217ENST00000475693 CCDC105Q8IYK2 499 aa18.68■□□□□ 0.58
ATG4B-217ENST00000475693 FAF2Q96CS3 445 aa18.68■□□□□ 0.58
ATG4B-217ENST00000475693 TTYH1Q9H313 450 aaPredicted RBP18.68■□□□□ 0.58
ATG4B-217ENST00000475693 GLP2RO95838 553 aa18.67■□□□□ 0.58
ATG4B-217ENST00000475693 IGLV3-27P01718 113 aa18.67■□□□□ 0.58
ATG4B-217ENST00000475693 PTPN2P17706 415 aa18.67■□□□□ 0.58
ATG4B-217ENST00000475693 ERCC2P18074 760 aa18.67■□□□□ 0.58
ATG4B-217ENST00000475693 TPI1P60174 286 aa18.67■□□□□ 0.58
ATG4B-217ENST00000475693 SMAD3P84022 425 aaKnown RBP18.67■□□□□ 0.58
ATG4B-217ENST00000475693 ITIH3Q06033 890 aa18.67■□□□□ 0.58
ATG4B-217ENST00000475693 BRMS1LQ5PSV4 323 aa18.67■□□□□ 0.58
ATG4B-217ENST00000475693 ADAMTS19Q8TE59 1207 aa18.67■□□□□ 0.58
ATG4B-217ENST00000475693 MRPL38Q96DV4 380 aaKnown RBP18.67■□□□□ 0.58
ATG4B-217ENST00000475693 ZSWIM3Q96MP5 696 aa18.67■□□□□ 0.58
ATG4B-217ENST00000475693 TMEM121Q9BTD3 319 aa18.67■□□□□ 0.58
ATG4B-217ENST00000475693 KLF16Q9BXK1 252 aaPredicted RBP18.67■□□□□ 0.58
ATG4B-217ENST00000475693 NEU3Q9UQ49 428 aa18.67■□□□□ 0.58
ATG4B-217ENST00000475693 CCL26Q9Y258 94 aa18.67■□□□□ 0.58
ATG4B-217ENST00000475693 CPQQ9Y646 472 aa18.67■□□□□ 0.58
ATG4B-217ENST00000475693 OBSL1O75147 1896 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 NUP205Q92621 2012 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 APOL1O14791 398 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 LIASO43766 372 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 STC2O76061 302 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 ZSCAN5DPP0CG00 497 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 PTGIRP43119 386 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 GYS2P54840 703 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 HYAL1Q12794 435 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 DPYSQ14117 519 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 SLC9A4Q6AI14 798 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 SRLQ86TD4 932 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 GSPT2Q8IYD1 628 aaKnown RBP18.66■□□□□ 0.58
ATG4B-217ENST00000475693 CFAP52Q8N1V2 620 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 NPWQ8N729 165 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 RUBCNQ92622 972 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 IGSF8Q969P0 613 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 CCDC114Q96M63 670 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 PRKD2Q9BZL6 878 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 LRRC19Q9H756 370 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 CCDC188H7C350 402 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 MFSD11O43934 449 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 CNTN5O94779 1100 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 APOEP02649 317 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 CKMP06732 381 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 SLC6A4P31645 630 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 GDF10P55107 478 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 MLLT6P55198 1093 aaPredicted RBP18.66■□□□□ 0.58
ATG4B-217ENST00000475693 AUHQ13825 339 aaKnown RBP18.66■□□□□ 0.58
ATG4B-217ENST00000475693 KCNC3Q14003 757 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 GRIN2CQ14957 1233 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 CYP1B1Q16678 543 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 PABPC1LQ4VXU2 614 aaKnown RBP18.66■□□□□ 0.58
ATG4B-217ENST00000475693 PDZD4Q76G19 769 aaPredicted RBP18.66■□□□□ 0.58
ATG4B-217ENST00000475693 TAB3Q8N5C8 712 aaPredicted RBP18.66■□□□□ 0.58
ATG4B-217ENST00000475693 ITFG1Q8TB96 612 aa18.66■□□□□ 0.58
ATG4B-217ENST00000475693 MRPS31Q92665 395 aaKnown RBP18.66■□□□□ 0.58
ATG4B-217ENST00000475693 CELF6Q96J87 481 aaKnown RBP18.66■□□□□ 0.58
ATG4B-217ENST00000475693 E9PAM4 449 aa18.65■□□□□ 0.58
ATG4B-217ENST00000475693 H3BRJ5 948 aa18.65■□□□□ 0.58
ATG4B-217ENST00000475693 CORO1AP31146 461 aaKnown RBP18.65■□□□□ 0.58
ATG4B-217ENST00000475693 VPS41P49754 854 aa18.65■□□□□ 0.58
ATG4B-217ENST00000475693 TUBP50607 506 aa18.65■□□□□ 0.58
ATG4B-217ENST00000475693 VCPP55072 806 aaKnown RBP18.65■□□□□ 0.58
ATG4B-217ENST00000475693 DR1Q01658 176 aa18.65■□□□□ 0.58
ATG4B-217ENST00000475693 RARS2Q5T160 578 aaKnown RBP18.65■□□□□ 0.58
ATG4B-217ENST00000475693 GPR158Q5T848 1215 aa18.65■□□□□ 0.58
ATG4B-217ENST00000475693 EP400NLQ6ZTU2 488 aa18.65■□□□□ 0.58
ATG4B-217ENST00000475693 TFAP2DQ7Z6R9 452 aa18.65■□□□□ 0.58
ATG4B-217ENST00000475693 PSTKQ8IV42 348 aaKnown RBP18.65■□□□□ 0.58
ATG4B-217ENST00000475693 RIN3Q8TB24 985 aa18.65■□□□□ 0.58
ATG4B-217ENST00000475693 P3H4Q92791 437 aa18.65■□□□□ 0.58
ATG4B-217ENST00000475693 HAPLN3Q96S86 360 aa18.65■□□□□ 0.58
ATG4B-217ENST00000475693 OSBPL2Q9H1P3 480 aa18.65■□□□□ 0.58
ATG4B-217ENST00000475693 RASSF4Q9H2L5 321 aa18.65■□□□□ 0.58
ATG4B-217ENST00000475693 SLITRK6Q9H5Y7 841 aa18.65■□□□□ 0.58
ATG4B-217ENST00000475693 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.65■□□□□ 0.58
ATG4B-217ENST00000475693 APOC4-APOC2K7ER74 178 aa18.65■□□□□ 0.58
ATG4B-217ENST00000475693 MYO1CO00159 1063 aa18.65■□□□□ 0.58
ATG4B-217ENST00000475693 SOX1O00570 391 aaPredicted RBP18.65■□□□□ 0.58
ATG4B-217ENST00000475693 TSPAN3O60637 253 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms