RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 LIN54Q6MZP7 749 aa6.32□□□□□ -1.4
TM9SF3-204ENST00000475401 ERAP2Q6P179 960 aa6.32□□□□□ -1.4
TM9SF3-204ENST00000475401 DHRS13Q6UX07 377 aa6.32□□□□□ -1.4
TM9SF3-204ENST00000475401 OR1N1Q8NGS0 311 aa6.32□□□□□ -1.4
TM9SF3-204ENST00000475401 OR6Y1Q8NGX8 325 aa6.32□□□□□ -1.4
TM9SF3-204ENST00000475401 SCAMP5Q8TAC9 235 aa6.32□□□□□ -1.4
TM9SF3-204ENST00000475401 STT3BQ8TCJ2 826 aa6.32□□□□□ -1.4
TM9SF3-204ENST00000475401 TRMT61AQ96FX7 289 aaKnown RBP6.32□□□□□ -1.4
TM9SF3-204ENST00000475401 GPR78Q96P69 363 aa6.32□□□□□ -1.4
TM9SF3-204ENST00000475401 HTATIP2Q9BUP3 242 aa6.32□□□□□ -1.4
TM9SF3-204ENST00000475401 MECRQ9BV79 373 aa6.32□□□□□ -1.4
TM9SF3-204ENST00000475401 QTRT1Q9BXR0 403 aaKnown RBP6.32□□□□□ -1.4
TM9SF3-204ENST00000475401 MLXIPQ9HAP2 919 aa6.32□□□□□ -1.4
TM9SF3-204ENST00000475401 B3GNT3Q9Y2A9 372 aa6.32□□□□□ -1.4
TM9SF3-204ENST00000475401 MORC2Q9Y6X9 1032 aaPredicted RBP6.32□□□□□ -1.4
TM9SF3-204ENST00000475401 CYP2D7A0A087X1C5 515 aa6.31□□□□□ -1.4
TM9SF3-204ENST00000475401 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.31□□□□□ -1.4
TM9SF3-204ENST00000475401 KCNU1A8MYU2 1149 aa6.31□□□□□ -1.4
TM9SF3-204ENST00000475401 IRAK2O43187 625 aa6.31□□□□□ -1.4
TM9SF3-204ENST00000475401 EIF3JO75822 258 aaKnown RBP6.31□□□□□ -1.4
TM9SF3-204ENST00000475401 SLC37A1P57057 533 aa6.31□□□□□ -1.4
TM9SF3-204ENST00000475401 STIM1Q13586 685 aa6.31□□□□□ -1.4
TM9SF3-204ENST00000475401 SEC23BQ15437 767 aa6.31□□□□□ -1.4
TM9SF3-204ENST00000475401 ZRSR2Q15696 482 aaKnown RBP6.31□□□□□ -1.4
TM9SF3-204ENST00000475401 SLC9C1Q4G0N8 1177 aa6.31□□□□□ -1.4
TM9SF3-204ENST00000475401 MTX3Q5HYI7 312 aa6.31□□□□□ -1.4
TM9SF3-204ENST00000475401 ANKRD45Q5TZF3 282 aa6.31□□□□□ -1.4
TM9SF3-204ENST00000475401 RBM44Q6ZP01 1051 aaKnown RBP6.31□□□□□ -1.4
TM9SF3-204ENST00000475401 ANKRD42Q8N9B4 389 aa6.31□□□□□ -1.4
TM9SF3-204ENST00000475401 FAM47BQ8NA70 645 aa6.31□□□□□ -1.4
TM9SF3-204ENST00000475401 GOLGA1Q92805 767 aa6.31□□□□□ -1.4
TM9SF3-204ENST00000475401 P2RY11Q96G91 374 aa6.31□□□□□ -1.4
TM9SF3-204ENST00000475401 CHMP4AQ9BY43 222 aa6.31□□□□□ -1.4
TM9SF3-204ENST00000475401 SLC8A2Q9UPR5 921 aa6.31□□□□□ -1.4
TM9SF3-204ENST00000475401 RIPOR2Q9Y4F9 1068 aa6.31□□□□□ -1.4
TM9SF3-204ENST00000475401 IPO5O00410 1097 aaKnown RBP6.3□□□□□ -1.4
TM9SF3-204ENST00000475401 RRHO14718 337 aa6.3□□□□□ -1.4
TM9SF3-204ENST00000475401 SGPL1O95470 568 aa6.3□□□□□ -1.4
TM9SF3-204ENST00000475401 TFEBP19484 476 aa6.3□□□□□ -1.4
TM9SF3-204ENST00000475401 RPS6KB1P23443 525 aa6.3□□□□□ -1.4
TM9SF3-204ENST00000475401 ATP5F1P24539 256 aaPredicted RBP6.3□□□□□ -1.4
TM9SF3-204ENST00000475401 CST5P28325 142 aaPredicted RBP6.3□□□□□ -1.4
TM9SF3-204ENST00000475401 HALP42357 657 aa6.3□□□□□ -1.4
TM9SF3-204ENST00000475401 CPA2P48052 419 aa6.3□□□□□ -1.4
TM9SF3-204ENST00000475401 AARSP49588 968 aaKnown RBP eCLIP6.3□□□□□ -1.4
TM9SF3-204ENST00000475401 ZNF84P51523 738 aa6.3□□□□□ -1.4
TM9SF3-204ENST00000475401 RPS13P62277 151 aaKnown RBP6.3□□□□□ -1.4
TM9SF3-204ENST00000475401 DMWDQ09019 674 aa6.3□□□□□ -1.4
TM9SF3-204ENST00000475401 GPR162Q16538 588 aa6.3□□□□□ -1.4
TM9SF3-204ENST00000475401 ADCK5Q3MIX3 580 aa6.3□□□□□ -1.4
TM9SF3-204ENST00000475401 SUPT20HL1Q3ZLR7 823 aa6.3□□□□□ -1.4
TM9SF3-204ENST00000475401 TTC22Q5TAA0 569 aa6.3□□□□□ -1.4
TM9SF3-204ENST00000475401 RRAGAQ7L523 313 aa6.3□□□□□ -1.4
TM9SF3-204ENST00000475401 BCAS4Q8TDM0 211 aa6.3□□□□□ -1.4
TM9SF3-204ENST00000475401 PIGSQ96S52 555 aa6.3□□□□□ -1.4
TM9SF3-204ENST00000475401 DDX23Q9BUQ8 820 aaKnown RBP6.3□□□□□ -1.4
TM9SF3-204ENST00000475401 TM2D2Q9BX73 214 aa6.3□□□□□ -1.4
TM9SF3-204ENST00000475401 PRSS22Q9GZN4 317 aa6.3□□□□□ -1.4
TM9SF3-204ENST00000475401 KIF17Q9P2E2 1029 aa6.3□□□□□ -1.4
TM9SF3-204ENST00000475401 ZNF804BA4D1E1 1349 aa6.29□□□□□ -1.4
TM9SF3-204ENST00000475401 ARID4BQ4LE39 1312 aaPredicted RBP6.29□□□□□ -1.4
TM9SF3-204ENST00000475401 C16orf96A6NNT2 1141 aa6.29□□□□□ -1.4
TM9SF3-204ENST00000475401 H0Y3Z8 333 aa6.29□□□□□ -1.4
TM9SF3-204ENST00000475401 BCAR3O75815 825 aa6.29□□□□□ -1.4
TM9SF3-204ENST00000475401 ST6GAL1P15907 406 aa6.29□□□□□ -1.4
TM9SF3-204ENST00000475401 TGM2P21980 687 aa6.29□□□□□ -1.4
TM9SF3-204ENST00000475401 IDUAP35475 653 aa6.29□□□□□ -1.4
TM9SF3-204ENST00000475401 MMP13P45452 471 aa6.29□□□□□ -1.4
TM9SF3-204ENST00000475401 MCM2P49736 904 aa6.29□□□□□ -1.4
TM9SF3-204ENST00000475401 RCAN1P53805 252 aa6.29□□□□□ -1.4
TM9SF3-204ENST00000475401 PNLIPRP1P54315 467 aa6.29□□□□□ -1.4
TM9SF3-204ENST00000475401 ZNF91Q05481 1191 aa6.29□□□□□ -1.4
TM9SF3-204ENST00000475401 DAZAP2Q15038 168 aaPredicted RBP6.29□□□□□ -1.4
TM9SF3-204ENST00000475401 GALNTL6Q49A17 601 aa6.29□□□□□ -1.4
TM9SF3-204ENST00000475401 LIPMQ5VYY2 423 aa6.29□□□□□ -1.4
TM9SF3-204ENST00000475401 MORN5Q5VZ52 161 aa6.29□□□□□ -1.4
TM9SF3-204ENST00000475401 DGAT2L7PQ6IED9 249 aa6.29□□□□□ -1.4
TM9SF3-204ENST00000475401 JMJD6Q6NYC1 403 aaPredicted RBP6.29□□□□□ -1.4
TM9SF3-204ENST00000475401 TFAP2DQ7Z6R9 452 aa6.29□□□□□ -1.4
TM9SF3-204ENST00000475401 RFX6Q8HWS3 928 aa6.29□□□□□ -1.4
TM9SF3-204ENST00000475401 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.29□□□□□ -1.4
TM9SF3-204ENST00000475401 SCLT1Q96NL6 688 aa6.29□□□□□ -1.4
TM9SF3-204ENST00000475401 PCDHA10Q9Y5I2 948 aa6.29□□□□□ -1.4
TM9SF3-204ENST00000475401 CYP3A7-CYP3A51PA0A087WV96 503 aa6.28□□□□□ -1.4
TM9SF3-204ENST00000475401 AGAP5A6NIR3 686 aa6.28□□□□□ -1.4
TM9SF3-204ENST00000475401 CGB1A6NKQ9 187 aa6.28□□□□□ -1.4
TM9SF3-204ENST00000475401 SEPT4O43236 478 aa6.28□□□□□ -1.4
TM9SF3-204ENST00000475401 HNRNPRO43390 633 aaKnown RBP6.28□□□□□ -1.4
TM9SF3-204ENST00000475401 CNTN5O94779 1100 aa6.28□□□□□ -1.4
TM9SF3-204ENST00000475401 CDK4P11802 303 aa6.28□□□□□ -1.4
TM9SF3-204ENST00000475401 CYP3A7P24462 503 aa6.28□□□□□ -1.4
TM9SF3-204ENST00000475401 FOXL2P58012 376 aa6.28□□□□□ -1.4
TM9SF3-204ENST00000475401 ID2Q02363 134 aa6.28□□□□□ -1.4
TM9SF3-204ENST00000475401 POSTNQ15063 836 aa6.28□□□□□ -1.4
TM9SF3-204ENST00000475401 TRIP6Q15654 476 aaKnown RBP6.28□□□□□ -1.4
TM9SF3-204ENST00000475401 ZNF626Q68DY1 528 aa6.28□□□□□ -1.4
TM9SF3-204ENST00000475401 SLC2A7Q6PXP3 512 aa6.28□□□□□ -1.4
TM9SF3-204ENST00000475401 UBE2Q1Q7Z7E8 422 aa6.28□□□□□ -1.4
TM9SF3-204ENST00000475401 RHPN2Q8IUC4 686 aa6.28□□□□□ -1.4
TM9SF3-204ENST00000475401 NKAPQ8N5F7 415 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms