RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 GPR152Q8TDT2 470 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 GIPC2Q8TF65 315 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 PPM1EQ8WY54 764 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 ZBTB9Q96C00 473 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 QKIQ96PU8 341 aaKnown RBP eCLIP10.54□□□□□ -0.728e-7■■■□□ 15.7
PCCB-213ENST00000475214 CDK5RAP1Q96SZ6 601 aaKnown RBP10.54□□□□□ -0.72
PCCB-213ENST00000475214 CLSTN3Q9BQT9 956 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 TTLL2Q9BWV7 592 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 CRISPLD1Q9H336 500 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 CDC42EP4Q9H3Q1 356 aaKnown RBP10.54□□□□□ -0.72
PCCB-213ENST00000475214 SEMA4AQ9H3S1 761 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 ANLNQ9NQW6 1124 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.54□□□□□ -0.72
PCCB-213ENST00000475214 ETNK2Q9NVF9 386 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 DTLQ9NZJ0 730 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 THEGQ9P2T0 379 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 SLC12A6Q9UHW9 1150 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 TLR6Q9Y2C9 796 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 SSX2IPQ9Y2D8 614 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 EYSQ5T1H1 3165 aa10.54□□□□□ -0.72
PCCB-213ENST00000475214 C5orf60A6NFR6 353 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 FAM72CH0Y354 149 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 RIPK2O43353 540 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 MFSD11O43934 449 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 PAGE1O75459 146 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 GCATO75600 419 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 ABLIM3O94929 683 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 MAP3K6O95382 1288 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 APOEP02649 317 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 MYZAPP0CAP1 466 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 CSH1P0DML2 217 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 CSH2P0DML3 217 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 POU3F3P20264 500 aaPredicted RBP10.53□□□□□ -0.72
PCCB-213ENST00000475214 MX2P20592 715 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 COL9A1P20849 921 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 EPHB2P29323 1055 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 ELF1P32519 619 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 ALDH1A3P47895 512 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 PGFP49763 221 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 KPNA1P52294 538 aaPredicted RBP10.53□□□□□ -0.72
PCCB-213ENST00000475214 BASP1P80723 227 aaKnown RBP10.53□□□□□ -0.72
PCCB-213ENST00000475214 MTA1Q13330 715 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 SLC29A2Q14542 456 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 TAF12Q16514 161 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 ACBD5Q5T8D3 534 aaPredicted RBP10.53□□□□□ -0.72
PCCB-213ENST00000475214 FAM72AQ5TYM5 149 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 FAM72DQ6L9T8 149 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 PPP1R21Q6ZMI0 780 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 FAM72BQ86X60 149 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 VPS52Q8N1B4 723 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 ATP6V0D2Q8N8Y2 350 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 HTR3CQ8WXA8 447 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 OVCA2Q8WZ82 227 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 CPT1BQ92523 772 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 PRCCQ92733 491 aaPredicted RBP10.53□□□□□ -0.72
PCCB-213ENST00000475214 OLFM3Q96PB7 478 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 RBM15Q96T37 977 aaKnown RBP eCLIP10.53□□□□□ -0.724e-6■■□□□ 13.6
PCCB-213ENST00000475214 RAD9AQ99638 391 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 PHACTR1Q9C0D0 580 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 KLC2Q9H0B6 622 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 BRD8Q9H0E9 1235 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 SIK2Q9H0K1 926 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 CATSPERBQ9H7T0 1116 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 CYP4F11Q9HBI6 524 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 MRPL17Q9NRX2 175 aaKnown RBP10.53□□□□□ -0.72
PCCB-213ENST00000475214 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.53□□□□□ -0.72
PCCB-213ENST00000475214 OSER1Q9NX31 292 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 VPS18Q9P253 973 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 NUDT5Q9UKK9 219 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 MAFFQ9ULX9 164 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 MAGED2Q9UNF1 606 aaPredicted RBP10.53□□□□□ -0.72
PCCB-213ENST00000475214 MFHAS1Q9Y4C4 1052 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 FARP1Q9Y4F1 1045 aaPredicted RBP10.53□□□□□ -0.72
PCCB-213ENST00000475214 NFS1Q9Y697 457 aa10.53□□□□□ -0.72
PCCB-213ENST00000475214 KCNU1A8MYU2 1149 aa10.52□□□□□ -0.73
PCCB-213ENST00000475214 I6L893 689 aaPredicted RBP10.52□□□□□ -0.73
PCCB-213ENST00000475214 CHADO15335 359 aa10.52□□□□□ -0.73
PCCB-213ENST00000475214 EIF3HO15372 352 aaKnown RBP eCLIP10.52□□□□□ -0.73
PCCB-213ENST00000475214 FGF10O15520 208 aaPredicted RBP10.52□□□□□ -0.73
PCCB-213ENST00000475214 MSI1O43347 362 aaKnown RBP10.52□□□□□ -0.73
PCCB-213ENST00000475214 LRIG2O94898 1065 aa10.52□□□□□ -0.73
PCCB-213ENST00000475214 GJB5O95377 273 aa10.52□□□□□ -0.73
PCCB-213ENST00000475214 TTC4O95801 387 aa10.52□□□□□ -0.73
PCCB-213ENST00000475214 ZDHHC11BP0C7U3 371 aa10.52□□□□□ -0.73
PCCB-213ENST00000475214 SRGAP2BP0DMP2 458 aa10.52□□□□□ -0.73
PCCB-213ENST00000475214 MYOGP15173 224 aa10.52□□□□□ -0.73
PCCB-213ENST00000475214 ATF6P18850 670 aa10.52□□□□□ -0.73
PCCB-213ENST00000475214 MAGEA4P43358 317 aa10.52□□□□□ -0.73
PCCB-213ENST00000475214 ARL4CP56559 192 aa10.52□□□□□ -0.73
PCCB-213ENST00000475214 HTRA4P83105 476 aaPredicted RBP10.52□□□□□ -0.73
PCCB-213ENST00000475214 NRG1Q02297 640 aaPredicted RBP10.52□□□□□ -0.73
PCCB-213ENST00000475214 ZNF844Q08AG5 666 aa10.52□□□□□ -0.73
PCCB-213ENST00000475214 AP1B1Q10567 949 aa10.52□□□□□ -0.73
PCCB-213ENST00000475214 EFEMP1Q12805 493 aa10.52□□□□□ -0.73
PCCB-213ENST00000475214 RAB33AQ14088 237 aa10.52□□□□□ -0.73
PCCB-213ENST00000475214 VEPH1Q14D04 833 aa10.52□□□□□ -0.73
PCCB-213ENST00000475214 TRIP4Q15650 581 aaPredicted RBP10.52□□□□□ -0.73
PCCB-213ENST00000475214 KRT71Q3SY84 523 aa10.52□□□□□ -0.73
PCCB-213ENST00000475214 C10orf120Q5SQS8 335 aa10.52□□□□□ -0.73
PCCB-213ENST00000475214 RWDD4Q6NW29 188 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms