RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 DHRS4L1P0CG22 281 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 RCN2Q14257 317 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 UNC93AQ86WB7 457 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 PPM1NQ8N819 430 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 EDEM1Q92611 657 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 MED10Q9BTT4 135 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 KCNK13Q9HB14 408 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 KRT82Q9NSB4 513 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 TAS2R1Q9NYW7 299 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 SEPT10Q9P0V9 454 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 TTLL3Q9Y4R7 772 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 IQANK1A0A1B0GTG1 560 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 YJEFN3A6XGL0 299 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 TNPO2O14787 897 aaKnown RBP12.82□□□□□ -0.36
RNF220-211ENST00000474956 PYGBP11216 843 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 KCNE1P15382 129 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 PTPN1P18031 435 aaKnown RBP12.82□□□□□ -0.36
RNF220-211ENST00000474956 CRYBB1P53674 252 aaPredicted RBP12.82□□□□□ -0.36
RNF220-211ENST00000474956 PRKD1Q15139 912 aaPredicted RBP12.82□□□□□ -0.36
RNF220-211ENST00000474956 C17orf99Q6UX52 265 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 MAP7D3Q8IWC1 876 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.82□□□□□ -0.36
RNF220-211ENST00000474956 NRG4Q8WWG1 115 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 CENPIQ92674 756 aaPredicted RBP12.82□□□□□ -0.36
RNF220-211ENST00000474956 PPP1R10Q96QC0 940 aaKnown RBP12.82□□□□□ -0.36
RNF220-211ENST00000474956 CYTH2Q99418 400 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 POPDC2Q9HBU9 364 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 GDAP2Q9NXN4 497 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 DDX43Q9NXZ2 648 aaKnown RBP12.82□□□□□ -0.36
RNF220-211ENST00000474956 MAD1L1Q9Y6D9 718 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 USP3Q9Y6I4 520 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 MGEA5O60502 916 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 TBX10O75333 385 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 POMCP01189 267 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 IL1BP01584 269 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 GSTA2P09210 222 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 DLDP09622 509 aaKnown RBP12.82□□□□□ -0.36
RNF220-211ENST00000474956 GNAT1P11488 350 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 CPT1AP50416 773 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 PTK7Q13308 1070 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 PDK2Q15119 407 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 DPYSL2Q16555 572 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 XKR4Q5GH76 650 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 CES3Q6UWW8 571 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 TMEM209Q96SK2 561 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 MECRQ9BV79 373 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 ZNF395Q9H8N7 513 aaPredicted RBP12.82□□□□□ -0.36
RNF220-211ENST00000474956 FBXO6Q9NRD1 293 aaPredicted RBP12.82□□□□□ -0.36
RNF220-211ENST00000474956 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.82□□□□□ -0.36
RNF220-211ENST00000474956 ZNF212Q9UDV6 495 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 SHROOM3Q8TF72 1996 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 M0QYT0 321 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 MDM4O15151 490 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 USP17L7P0C7H9 530 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 CSH1P0DML2 217 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 CSH2P0DML3 217 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 STIP1P31948 543 aaKnown RBP12.82□□□□□ -0.36
RNF220-211ENST00000474956 ETV4P43268 484 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 AP1B1Q10567 949 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 FAM91A1Q658Y4 838 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 RINLQ6ZS11 566 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 MFN1Q8IWA4 741 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 ZMIZ2Q8NF64 920 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 APOPT1Q96IL0 206 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 SENP8Q96LD8 212 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 IKBKGQ9Y6K9 419 aa12.82□□□□□ -0.36
RNF220-211ENST00000474956 E2F8A0AVK6 867 aa12.81□□□□□ -0.36
RNF220-211ENST00000474956 KCNK1O00180 336 aa12.81□□□□□ -0.36
RNF220-211ENST00000474956 SNUPNO95149 360 aaKnown RBP12.81□□□□□ -0.36
RNF220-211ENST00000474956 CD4P01730 458 aa12.81□□□□□ -0.36
RNF220-211ENST00000474956 ITGB1P05556 798 aa12.81□□□□□ -0.36
RNF220-211ENST00000474956 TKTL1P51854 596 aa12.81□□□□□ -0.36
RNF220-211ENST00000474956 ROR2Q01974 943 aaKnown RBP12.81□□□□□ -0.36
RNF220-211ENST00000474956 OR52E8Q6IFG1 317 aa12.81□□□□□ -0.36
RNF220-211ENST00000474956 UCMAQ8WVF2 138 aa12.81□□□□□ -0.36
RNF220-211ENST00000474956 TRIB2Q92519 343 aa12.81□□□□□ -0.36
RNF220-211ENST00000474956 PCED1BQ96HM7 432 aa12.81□□□□□ -0.36
RNF220-211ENST00000474956 ZNF670Q9BS34 389 aa12.81□□□□□ -0.36
RNF220-211ENST00000474956 ULBP1Q9BZM6 244 aa12.81□□□□□ -0.36
RNF220-211ENST00000474956 TSPYL2Q9H2G4 693 aaPredicted RBP12.81□□□□□ -0.36
RNF220-211ENST00000474956 ARHGEF4Q9NR80 690 aa12.81□□□□□ -0.36
RNF220-211ENST00000474956 ZC3H7BQ9UGR2 993 aaKnown RBP12.81□□□□□ -0.36
RNF220-211ENST00000474956 USP12O75317 370 aa12.81□□□□□ -0.36
RNF220-211ENST00000474956 PTPN9P43378 593 aa12.81□□□□□ -0.36
RNF220-211ENST00000474956 BRCC3P46736 316 aa12.81□□□□□ -0.36
RNF220-211ENST00000474956 PGFP49763 221 aa12.81□□□□□ -0.36
RNF220-211ENST00000474956 NEK3P51956 506 aa12.81□□□□□ -0.36
RNF220-211ENST00000474956 STILQ15468 1287 aa12.81□□□□□ -0.36
RNF220-211ENST00000474956 CES4AQ5XG92 561 aa12.81□□□□□ -0.36
RNF220-211ENST00000474956 PDCD7Q8N8D1 485 aaKnown RBP12.81□□□□□ -0.36
RNF220-211ENST00000474956 WDR60Q8WVS4 1066 aa12.81□□□□□ -0.36
RNF220-211ENST00000474956 OXNAD1Q96HP4 312 aaPredicted RBP12.81□□□□□ -0.36
RNF220-211ENST00000474956 FAM111AQ96PZ2 611 aa12.81□□□□□ -0.36
RNF220-211ENST00000474956 SMOQ99835 787 aa12.81□□□□□ -0.36
RNF220-211ENST00000474956 DUSP16Q9BY84 665 aa12.81□□□□□ -0.36
RNF220-211ENST00000474956 DCAF8L1A6NGE4 600 aa12.8□□□□□ -0.36
RNF220-211ENST00000474956 MAP3K7O43318 606 aa12.8□□□□□ -0.36
RNF220-211ENST00000474956 NPR3P17342 541 aa12.8□□□□□ -0.36
RNF220-211ENST00000474956 TGM2P21980 687 aa12.8□□□□□ -0.36
RNF220-211ENST00000474956 MATKP42679 507 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms