RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 FIBINQ8TAL6 211 aa21.13■□□□□ 0.97
PDLIM4-206ENST00000474421 SLC39A13Q96H72 371 aa21.13■□□□□ 0.97
PDLIM4-206ENST00000474421 ZDHHC5Q9C0B5 715 aa21.13■□□□□ 0.97
PDLIM4-206ENST00000474421 THAP9Q9H5L6 903 aa21.13■□□□□ 0.97
PDLIM4-206ENST00000474421 POPDC2Q9HBU9 364 aa21.13■□□□□ 0.97
PDLIM4-206ENST00000474421 SUN2Q9UH99 717 aa21.13■□□□□ 0.97
PDLIM4-206ENST00000474421 MAP1BP46821 2468 aaKnown RBP21.13■□□□□ 0.97
PDLIM4-206ENST00000474421 A0A1B0GTW7 788 aa21.12■□□□□ 0.97
PDLIM4-206ENST00000474421 KCNJ18B7U540 433 aa21.12■□□□□ 0.97
PDLIM4-206ENST00000474421 E5RJQ4 531 aa21.12■□□□□ 0.97
PDLIM4-206ENST00000474421 PAPSS1O43252 624 aaPredicted RBP21.12■□□□□ 0.97
PDLIM4-206ENST00000474421 C7P10643 843 aa21.12■□□□□ 0.97
PDLIM4-206ENST00000474421 HLA-EP13747 358 aa21.12■□□□□ 0.97
PDLIM4-206ENST00000474421 USP8P40818 1118 aa21.12■□□□□ 0.97
PDLIM4-206ENST00000474421 MTIF2P46199 727 aaKnown RBP21.12■□□□□ 0.97
PDLIM4-206ENST00000474421 YWHAZP63104 245 aaKnown RBP21.12■□□□□ 0.97
PDLIM4-206ENST00000474421 ZBTB16Q05516 673 aa21.12■□□□□ 0.97
PDLIM4-206ENST00000474421 SEMA3BQ13214 749 aa21.12■□□□□ 0.97
PDLIM4-206ENST00000474421 ARHGAP44Q17R89 818 aa21.12■□□□□ 0.97
PDLIM4-206ENST00000474421 NADSYN1Q6IA69 706 aa21.12■□□□□ 0.97
PDLIM4-206ENST00000474421 TAC4Q86UU9 113 aa21.12■□□□□ 0.97
PDLIM4-206ENST00000474421 MINDY1Q8N5J2 469 aa21.12■□□□□ 0.97
PDLIM4-206ENST00000474421 DEFB124Q8NES8 71 aa21.12■□□□□ 0.97
PDLIM4-206ENST00000474421 LHX5Q9H2C1 402 aa21.12■□□□□ 0.97
PDLIM4-206ENST00000474421 STIM2Q9P246 746 aa21.12■□□□□ 0.97
PDLIM4-206ENST00000474421 MUC22E2RYF6 1773 aaPredicted RBP21.12■□□□□ 0.97
PDLIM4-206ENST00000474421 METTL12A8MUP2 240 aa21.11■□□□□ 0.97
PDLIM4-206ENST00000474421 ASLP04424 464 aa21.11■□□□□ 0.97
PDLIM4-206ENST00000474421 SLC9A1P19634 815 aa21.11■□□□□ 0.97
PDLIM4-206ENST00000474421 CD70P32970 193 aa21.11■□□□□ 0.97
PDLIM4-206ENST00000474421 SNX16P57768 344 aa21.11■□□□□ 0.97
PDLIM4-206ENST00000474421 ST8SIA6P61647 398 aa21.11■□□□□ 0.97
PDLIM4-206ENST00000474421 PDCLQ13371 301 aa21.11■□□□□ 0.97
PDLIM4-206ENST00000474421 CDH18Q13634 790 aa21.11■□□□□ 0.97
PDLIM4-206ENST00000474421 PTPRNQ16849 979 aa21.11■□□□□ 0.97
PDLIM4-206ENST00000474421 MS4A13Q5J8X5 152 aa21.11■□□□□ 0.97
PDLIM4-206ENST00000474421 GJB7Q6PEY0 223 aa21.11■□□□□ 0.97
PDLIM4-206ENST00000474421 PIP4P1Q86T03 277 aa21.11■□□□□ 0.97
PDLIM4-206ENST00000474421 FAM114A1Q8IWE2 563 aa21.11■□□□□ 0.97
PDLIM4-206ENST00000474421 ADAM32Q8TC27 787 aa21.11■□□□□ 0.97
PDLIM4-206ENST00000474421 SHC3Q92529 594 aa21.11■□□□□ 0.97
PDLIM4-206ENST00000474421 NOX5Q96PH1 765 aa21.11■□□□□ 0.97
PDLIM4-206ENST00000474421 FSCN3Q9NQT6 498 aa21.11■□□□□ 0.97
PDLIM4-206ENST00000474421 DNAAF2Q9NVR5 837 aaKnown RBP21.11■□□□□ 0.97
PDLIM4-206ENST00000474421 SLC12A6Q9UHW9 1150 aa21.11■□□□□ 0.97
PDLIM4-206ENST00000474421 GLI1P08151 1106 aa21.1■□□□□ 0.97
PDLIM4-206ENST00000474421 PON1P27169 355 aa21.1■□□□□ 0.97
PDLIM4-206ENST00000474421 RPS24P62847 133 aaKnown RBP21.1■□□□□ 0.97
PDLIM4-206ENST00000474421 SLC14A1Q13336 389 aa21.1■□□□□ 0.97
PDLIM4-206ENST00000474421 HNRNPDQ14103 355 aaKnown RBP21.1■□□□□ 0.97
PDLIM4-206ENST00000474421 ST3GAL2Q16842 350 aa21.1■□□□□ 0.97
PDLIM4-206ENST00000474421 DCAF12L1Q5VU92 463 aa21.1■□□□□ 0.97
PDLIM4-206ENST00000474421 SYPL2Q5VXT5 272 aa21.1■□□□□ 0.97
PDLIM4-206ENST00000474421 CACUL1Q86Y37 369 aa21.1■□□□□ 0.97
PDLIM4-206ENST00000474421 IRF2BP1Q8IU81 584 aa21.1■□□□□ 0.97
PDLIM4-206ENST00000474421 WFDC5Q8TCV5 224 aa21.1■□□□□ 0.97
PDLIM4-206ENST00000474421 TTC17Q96AE7 1141 aa21.1■□□□□ 0.97
PDLIM4-206ENST00000474421 BTN2A3PQ96KV6 586 aa21.1■□□□□ 0.97
PDLIM4-206ENST00000474421 PRICKLE1Q96MT3 831 aaPredicted RBP21.1■□□□□ 0.97
PDLIM4-206ENST00000474421 NUCKS1Q9H1E3 243 aaKnown RBP21.1■□□□□ 0.97
PDLIM4-206ENST00000474421 TJP2Q9UDY2 1190 aa21.1■□□□□ 0.97
PDLIM4-206ENST00000474421 CYTH4Q9UIA0 394 aa21.1■□□□□ 0.97
PDLIM4-206ENST00000474421 BECN2A8MW95 431 aa21.09■□□□□ 0.97
PDLIM4-206ENST00000474421 MOCS3O95396 460 aa21.09■□□□□ 0.97
PDLIM4-206ENST00000474421 TRUB2O95900 331 aaKnown RBP21.09■□□□□ 0.97
PDLIM4-206ENST00000474421 MOCS2O96007 188 aaPredicted RBP21.09■□□□□ 0.97
PDLIM4-206ENST00000474421 DNTTP04053 509 aa21.09■□□□□ 0.97
PDLIM4-206ENST00000474421 SLC2A3P11169 496 aa21.09■□□□□ 0.97
PDLIM4-206ENST00000474421 PRKCSHP14314 528 aaPredicted RBP21.09■□□□□ 0.97
PDLIM4-206ENST00000474421 MAOBP27338 520 aa21.09■□□□□ 0.97
PDLIM4-206ENST00000474421 PTK2Q05397 1052 aa21.09■□□□□ 0.97
PDLIM4-206ENST00000474421 MAN2A1Q16706 1144 aa21.09■□□□□ 0.97
PDLIM4-206ENST00000474421 TTC31Q49AM3 519 aaPredicted RBP21.09■□□□□ 0.97
PDLIM4-206ENST00000474421 CARNMT1Q8N4J0 409 aa21.09■□□□□ 0.97
PDLIM4-206ENST00000474421 KDM1BQ8NB78 822 aa21.09■□□□□ 0.97
PDLIM4-206ENST00000474421 LMLNQ96KR4 655 aa21.09■□□□□ 0.97
PDLIM4-206ENST00000474421 MIR1-1HGQ9H1L0 117 aa21.09■□□□□ 0.97
PDLIM4-206ENST00000474421 CLSTN2Q9H4D0 955 aa21.09■□□□□ 0.97
PDLIM4-206ENST00000474421 ACP6Q9NPH0 428 aa21.09■□□□□ 0.97
PDLIM4-206ENST00000474421 PRSS16Q9NQE7 514 aa21.09■□□□□ 0.97
PDLIM4-206ENST00000474421 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.09■□□□□ 0.97
PDLIM4-206ENST00000474421 ASNSD1Q9NWL6 643 aa21.09■□□□□ 0.97
PDLIM4-206ENST00000474421 DACH1Q9UI36 760 aa21.09■□□□□ 0.97
PDLIM4-206ENST00000474421 PCDHGC3Q9UN70 934 aa21.09■□□□□ 0.97
PDLIM4-206ENST00000474421 CEP295Q9C0D2 2601 aa21.08■□□□□ 0.97
PDLIM4-206ENST00000474421 BCAT2O15382 392 aaPredicted RBP21.08■□□□□ 0.97
PDLIM4-206ENST00000474421 LUC7L3O95232 432 aaKnown RBP21.08■□□□□ 0.97
PDLIM4-206ENST00000474421 IGLV3-25P01717 112 aa21.08■□□□□ 0.97
PDLIM4-206ENST00000474421 CSKP41240 450 aa21.08■□□□□ 0.97
PDLIM4-206ENST00000474421 CDK17Q00537 523 aa21.08■□□□□ 0.97
PDLIM4-206ENST00000474421 SFSWAPQ12872 951 aaKnown RBP21.08■□□□□ 0.97
PDLIM4-206ENST00000474421 FOXC1Q12948 553 aa21.08■□□□□ 0.97
PDLIM4-206ENST00000474421 MTA1Q13330 715 aa21.08■□□□□ 0.97
PDLIM4-206ENST00000474421 DCAF6Q58WW2 860 aa21.08■□□□□ 0.97
PDLIM4-206ENST00000474421 ZC3H12AQ5D1E8 599 aaKnown RBP21.08■□□□□ 0.97
PDLIM4-206ENST00000474421 EFHC1Q5JVL4 640 aa21.08■□□□□ 0.97
PDLIM4-206ENST00000474421 ZNF776Q68DI1 518 aaPredicted RBP21.08■□□□□ 0.97
PDLIM4-206ENST00000474421 FAM124AQ86V42 546 aa21.08■□□□□ 0.97
PDLIM4-206ENST00000474421 CHSY1Q86X52 802 aa21.08■□□□□ 0.97
PDLIM4-206ENST00000474421 ZNF366Q8N895 744 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms