RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 PDE2AO00408 941 aaPredicted RBP10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 SLC9A3R1O14745 358 aaPredicted RBP10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 STC2O76061 302 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 LRIG2O94898 1065 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 IGLV3-27P01718 113 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 TUBBP07437 444 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 UQCRHP07919 91 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 RHOXF2BP0C7M4 288 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 ERCC2P18074 760 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 AMPD1P23109 780 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 CHKAP35790 457 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 GGCXP38435 758 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 MTHFRP42898 656 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 ARSEP51690 589 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 KCNQ1P51787 676 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 SLC7A9P82251 487 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 NRG1Q02297 640 aaPredicted RBP10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 AUHQ13825 339 aaKnown RBP10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 PDK1Q15118 436 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 SKIV2LQ15477 1246 aaKnown RBP10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 MS4A13Q5J8X5 152 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 ADGRF1Q5T601 910 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 SLC9A4Q6AI14 798 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 SYDE1Q6ZW31 735 aaPredicted RBP10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 TMEM150AQ86TG1 271 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 MMGT1Q8N4V1 131 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 C12orf50Q8NA57 414 aaPredicted RBP10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 CCNYQ8ND76 341 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 FAM71BQ8TC56 605 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 ACTL9Q8TC94 416 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 NSMCE1Q8WV22 266 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 AZIN2Q96A70 460 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 FAF2Q96CS3 445 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 CYP2S1Q96SQ9 504 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 RHOXF2Q9BQY4 288 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 LRRC3Q9BY71 257 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 ARHGEF4Q9NR80 690 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 TMPRSS4Q9NRS4 437 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 GKN1Q9NS71 199 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 TDP1Q9NUW8 608 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 ARGLU1Q9NWB6 273 aaPredicted RBP10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 ASIC3Q9UHC3 531 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 ARHGAP26Q9UNA1 814 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 FAM187AA6NFU0 413 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 HACD1B0YJ81 288 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 DFFAO00273 331 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 LEFTY2O00292 366 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 LIASO43766 372 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 OLFM2O95897 454 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 RBP3P10745 1247 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 CEBPBP17676 345 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 GTF2F1P35269 517 aaKnown RBP eCLIP10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 ETFBP38117 255 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 COILP38432 576 aaPredicted RBP10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 VCPP55072 806 aaKnown RBP10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 MLLT6P55198 1093 aaPredicted RBP10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 NTHL1P78549 312 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 KLF1Q13351 362 aaPredicted RBP10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 NOMO1Q15155 1222 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 PIK3R6Q5UE93 754 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 HEATR6Q6AI08 1181 aaKnown RBP10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 TMEM184AQ6ZMB5 413 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 GPR149Q86SP6 731 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 ZC3H18Q86VM9 953 aaKnown RBP10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 YAF2Q8IY57 180 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 ATPAF2Q8N5M1 289 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 GPR161Q8N6U8 529 aaKnown RBP10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 HJURPQ8NCD3 748 aaPredicted RBP10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 ATL2Q8NHH9 583 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 PCDH19Q8TAB3 1148 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 SH3RF2Q8TEC5 729 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 TFB1MQ8WVM0 346 aaKnown RBP10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 ATG4AQ8WYN0 398 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 TSC1Q92574 1164 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 RUBCNQ92622 972 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 ZNF707Q96C28 371 aaPredicted RBP10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 TCEAL4Q96EI5 215 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 FAM161BQ96MY7 647 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 BRD8Q9H0E9 1235 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 RNF38Q9H0F5 515 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 RETREG1Q9H6L5 497 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 LRRC19Q9H756 370 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 THG1LQ9NWX6 298 aaKnown RBP10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 TBC1D14Q9P2M4 693 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 PPARGC1AQ9UBK2 798 aaKnown RBP10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 AMACRQ9UHK6 382 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 SNX10Q9Y5X0 201 aa10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 V9GYY5 206 aaPredicted RBP10.58□□□□□ -0.72
PRPF38A-202ENST00000474048 NUP210Q8TEM1 1887 aaPredicted RBP10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 A0A1B0GVM2 712 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 TCRBV7S2A1N4TA0A589 114 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 E2F8A0AVK6 867 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 TCAF2A6NFQ2 919 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 ARHGAP42A6NI28 874 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 FAM72CH0Y354 149 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 H0Y626 953 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 MTSS1O43312 755 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 MFSD11O43934 449 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms