RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 CFAP52Q8N1V2 620 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 SYNPOQ8N3V7 929 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 CARNMT1Q8N4J0 409 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 CCDC26Q8TAB7 109 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 CLDN23Q96B33 292 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 ARHGEF26Q96DR7 871 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 PRICKLE1Q96MT3 831 aaPredicted RBP12.84□□□□□ -0.35
DDX56-209ENST00000473924 RPRD1AQ96P16 312 aaPredicted RBP12.84□□□□□ -0.35
DDX56-209ENST00000473924 HAPLN3Q96S86 360 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 PRMT1Q99873 361 aaKnown RBP12.84□□□□□ -0.35
DDX56-209ENST00000473924 PACSIN1Q9BY11 444 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 SLC2A11Q9BYW1 496 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 RAB6CQ9H0N0 254 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 LUC7LQ9NQ29 371 aaKnown RBP12.84□□□□□ -0.35
DDX56-209ENST00000473924 TMPRSS4Q9NRS4 437 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 ANAPC7Q9UJX3 599 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 VANGL2Q9ULK5 521 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 H0Y626 953 aa12.83□□□□□ -0.36
DDX56-209ENST00000473924 GFRA2O00451 464 aa12.83□□□□□ -0.36
DDX56-209ENST00000473924 TRIM24O15164 1050 aa12.83□□□□□ -0.36
DDX56-209ENST00000473924 RNF40O75150 1001 aa12.83□□□□□ -0.36
DDX56-209ENST00000473924 IPO7O95373 1038 aaKnown RBP12.83□□□□□ -0.36
DDX56-209ENST00000473924 TMEM253P0C7T8 217 aa12.83□□□□□ -0.36
DDX56-209ENST00000473924 ADRA1BP35368 520 aa12.83□□□□□ -0.36
DDX56-209ENST00000473924 TNFRSF4P43489 277 aa12.83□□□□□ -0.36
DDX56-209ENST00000473924 GSDMDP57764 484 aa12.83□□□□□ -0.36
DDX56-209ENST00000473924 MESP2Q0VG99 397 aa12.83□□□□□ -0.36
DDX56-209ENST00000473924 CDH18Q13634 790 aa12.83□□□□□ -0.36
DDX56-209ENST00000473924 C10orf76Q5T2E6 689 aa12.83□□□□□ -0.36
DDX56-209ENST00000473924 TTC39BQ5VTQ0 682 aaPredicted RBP12.83□□□□□ -0.36
DDX56-209ENST00000473924 FBXL22Q6P050 247 aa12.83□□□□□ -0.36
DDX56-209ENST00000473924 SLFN11Q7Z7L1 901 aa12.83□□□□□ -0.36
DDX56-209ENST00000473924 ZNF557Q8N988 423 aaPredicted RBP12.83□□□□□ -0.36
DDX56-209ENST00000473924 TERB1Q8NA31 727 aa12.83□□□□□ -0.36
DDX56-209ENST00000473924 FNIP1Q8TF40 1166 aa12.83□□□□□ -0.36
DDX56-209ENST00000473924 P2RY11Q96G91 374 aa12.83□□□□□ -0.36
DDX56-209ENST00000473924 BAG1Q99933 345 aaPredicted RBP12.83□□□□□ -0.36
DDX56-209ENST00000473924 TRIM7Q9C029 511 aa12.83□□□□□ -0.36
DDX56-209ENST00000473924 ANLNQ9NQW6 1124 aa12.83□□□□□ -0.36
DDX56-209ENST00000473924 SPATA6Q9NWH7 488 aaPredicted RBP12.83□□□□□ -0.36
DDX56-209ENST00000473924 DLGAP2Q9P1A6 1054 aa12.83□□□□□ -0.36
DDX56-209ENST00000473924 IP6K2Q9UHH9 426 aa12.83□□□□□ -0.36
DDX56-209ENST00000473924 FBXO10Q9UK96 956 aa12.83□□□□□ -0.36
DDX56-209ENST00000473924 SOWAHDA6NJG2 315 aa12.82□□□□□ -0.36
DDX56-209ENST00000473924 I6L893 689 aaPredicted RBP12.82□□□□□ -0.36
DDX56-209ENST00000473924 K7EQS6 105 aa12.82□□□□□ -0.36
DDX56-209ENST00000473924 MYO1FO00160 1098 aa12.82□□□□□ -0.36
DDX56-209ENST00000473924 SRGAP2O75044 1071 aa12.82□□□□□ -0.36
DDX56-209ENST00000473924 ATG13O75143 517 aa12.82□□□□□ -0.36
DDX56-209ENST00000473924 CISD3P0C7P0 127 aa12.82□□□□□ -0.36
DDX56-209ENST00000473924 MAGEA1P43355 309 aa12.82□□□□□ -0.36
DDX56-209ENST00000473924 PIGHQ14442 188 aaPredicted RBP12.82□□□□□ -0.36
DDX56-209ENST00000473924 C2orf27AQ580R0 203 aa12.82□□□□□ -0.36
DDX56-209ENST00000473924 EFHC2Q5JST6 749 aa12.82□□□□□ -0.36
DDX56-209ENST00000473924 Q6ZS52 159 aa12.82□□□□□ -0.36
DDX56-209ENST00000473924 ANKS1BQ7Z6G8 1248 aa12.82□□□□□ -0.36
DDX56-209ENST00000473924 C14orf80Q86SX3 495 aa12.82□□□□□ -0.36
DDX56-209ENST00000473924 PHTF2Q8N3S3 785 aa12.82□□□□□ -0.36
DDX56-209ENST00000473924 CCDC185Q8N715 623 aa12.82□□□□□ -0.36
DDX56-209ENST00000473924 DTWD2Q8NBA8 298 aa12.82□□□□□ -0.36
DDX56-209ENST00000473924 ZNF564Q8TBZ8 553 aaPredicted RBP12.82□□□□□ -0.36
DDX56-209ENST00000473924 EZH1Q92800 747 aaPredicted RBP12.82□□□□□ -0.36
DDX56-209ENST00000473924 NTAN1Q96AB6 310 aa12.82□□□□□ -0.36
DDX56-209ENST00000473924 MYEOVQ96EZ4 313 aa12.82□□□□□ -0.36
DDX56-209ENST00000473924 C1orf74Q96LT6 269 aa12.82□□□□□ -0.36
DDX56-209ENST00000473924 NCAPGQ9BPX3 1015 aa12.82□□□□□ -0.36
DDX56-209ENST00000473924 IER2Q9BTL4 223 aa12.82□□□□□ -0.36
DDX56-209ENST00000473924 CHRDQ9H2X0 955 aa12.82□□□□□ -0.36
DDX56-209ENST00000473924 ABCB8Q9NUT2 735 aa12.82□□□□□ -0.36
DDX56-209ENST00000473924 UVRAGQ9P2Y5 699 aa12.82□□□□□ -0.36
DDX56-209ENST00000473924 CLEC4EQ9ULY5 219 aa12.82□□□□□ -0.36
DDX56-209ENST00000473924 SLC27A6Q9Y2P4 619 aa12.82□□□□□ -0.36
DDX56-209ENST00000473924 SNX10Q9Y5X0 201 aa12.82□□□□□ -0.36
DDX56-209ENST00000473924 KIAA1549LQ6ZVL6 1849 aa12.82□□□□□ -0.36
DDX56-209ENST00000473924 A0A0A0MRY4 1105 aa12.81□□□□□ -0.36
DDX56-209ENST00000473924 A0A1B0GVM2 712 aa12.81□□□□□ -0.36
DDX56-209ENST00000473924 TCAF2A6NFQ2 919 aa12.81□□□□□ -0.36
DDX56-209ENST00000473924 EIF3CLB5ME19 914 aaKnown RBP12.81□□□□□ -0.36
DDX56-209ENST00000473924 E9PAM4 449 aa12.81□□□□□ -0.36
DDX56-209ENST00000473924 LAMTOR5O43504 91 aa12.81□□□□□ -0.36
DDX56-209ENST00000473924 PRPSAP2O60256 369 aa12.81□□□□□ -0.36
DDX56-209ENST00000473924 LUC7L3O95232 432 aaKnown RBP12.81□□□□□ -0.36
DDX56-209ENST00000473924 NDUFA10O95299 355 aa12.81□□□□□ -0.36
DDX56-209ENST00000473924 FECHP22830 423 aa12.81□□□□□ -0.36
DDX56-209ENST00000473924 TIE1P35590 1138 aa12.81□□□□□ -0.36
DDX56-209ENST00000473924 SSR1P43307 286 aaKnown RBP12.81□□□□□ -0.36
DDX56-209ENST00000473924 MRE11P49959 708 aa12.81□□□□□ -0.36
DDX56-209ENST00000473924 AIF1P55008 147 aa12.81□□□□□ -0.36
DDX56-209ENST00000473924 ZNF252P-AS1Q0IIN9 211 aa12.81□□□□□ -0.36
DDX56-209ENST00000473924 MTAPQ13126 283 aa12.81□□□□□ -0.36
DDX56-209ENST00000473924 ACAP1Q15027 740 aa12.81□□□□□ -0.36
DDX56-209ENST00000473924 CIR1Q86X95 450 aaPredicted RBP12.81□□□□□ -0.36
DDX56-209ENST00000473924 SFTPA1Q8IWL2 248 aa12.81□□□□□ -0.36
DDX56-209ENST00000473924 CCAR2Q8N163 923 aaKnown RBP12.81□□□□□ -0.36
DDX56-209ENST00000473924 RPLP0P6Q8NHW5 317 aa12.81□□□□□ -0.36
DDX56-209ENST00000473924 FIBINQ8TAL6 211 aa12.81□□□□□ -0.36
DDX56-209ENST00000473924 UCMAQ8WVF2 138 aa12.81□□□□□ -0.36
DDX56-209ENST00000473924 ANP32BQ92688 251 aaKnown RBP12.81□□□□□ -0.36
DDX56-209ENST00000473924 IGSF8Q969P0 613 aa12.81□□□□□ -0.36
DDX56-209ENST00000473924 BTBD6Q96KE9 485 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms