RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 ZNF398Q8TD17 642 aa5.17□□□□□ -1.58
CNOT4-209ENST00000473470 DENND1AQ8TEH3 1009 aa5.17□□□□□ -1.58
CNOT4-209ENST00000473470 PNISRQ8TF01 805 aaKnown RBP5.17□□□□□ -1.58
CNOT4-209ENST00000473470 EFHD1Q9BUP0 239 aa5.17□□□□□ -1.58
CNOT4-209ENST00000473470 STK33Q9BYT3 514 aa5.17□□□□□ -1.58
CNOT4-209ENST00000473470 RXFP3Q9NSD7 469 aa5.17□□□□□ -1.58
CNOT4-209ENST00000473470 LPAR3Q9UBY5 353 aa5.17□□□□□ -1.58
CNOT4-209ENST00000473470 CDC23Q9UJX2 597 aa5.17□□□□□ -1.58
CNOT4-209ENST00000473470 FZD4Q9ULV1 537 aa5.17□□□□□ -1.58
CNOT4-209ENST00000473470 DHX29Q7Z478 1369 aaKnown RBP5.16□□□□□ -1.58
CNOT4-209ENST00000473470 PTPRUQ92729 1446 aa5.16□□□□□ -1.58
CNOT4-209ENST00000473470 PLCH1Q4KWH8 1693 aa5.16□□□□□ -1.58
CNOT4-209ENST00000473470 CYP2D7A0A087X1C5 515 aa5.16□□□□□ -1.58
CNOT4-209ENST00000473470 E5RJQ4 531 aa5.16□□□□□ -1.58
CNOT4-209ENST00000473470 HNRNPDLO14979 420 aaKnown RBP5.16□□□□□ -1.58
CNOT4-209ENST00000473470 CREB3O43889 395 aa5.16□□□□□ -1.58
CNOT4-209ENST00000473470 VIPP01282 170 aa5.16□□□□□ -1.58
CNOT4-209ENST00000473470 SLC3A2P08195 630 aaKnown RBP5.16□□□□□ -1.58
CNOT4-209ENST00000473470 TACR3P29371 465 aa5.16□□□□□ -1.58
CNOT4-209ENST00000473470 ARHGAP25P42331 645 aa5.16□□□□□ -1.58
CNOT4-209ENST00000473470 TECP42680 631 aa5.16□□□□□ -1.58
CNOT4-209ENST00000473470 MMP13P45452 471 aa5.16□□□□□ -1.58
CNOT4-209ENST00000473470 JAK3P52333 1124 aa5.16□□□□□ -1.58
CNOT4-209ENST00000473470 GPC5P78333 572 aa5.16□□□□□ -1.58
CNOT4-209ENST00000473470 IDI1Q13907 227 aa5.16□□□□□ -1.58
CNOT4-209ENST00000473470 ZRSR2Q15696 482 aaKnown RBP5.16□□□□□ -1.58
CNOT4-209ENST00000473470 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.16□□□□□ -1.58
CNOT4-209ENST00000473470 ARL6IP4Q66PJ3 421 aaKnown RBP5.16□□□□□ -1.58
CNOT4-209ENST00000473470 SYTL1Q8IYJ3 562 aa5.16□□□□□ -1.58
CNOT4-209ENST00000473470 TXLNBQ8N3L3 684 aa5.16□□□□□ -1.58
CNOT4-209ENST00000473470 FAM71DQ8N9W8 422 aa5.16□□□□□ -1.58
CNOT4-209ENST00000473470 PRSS3P2Q8NHM4 247 aa5.16□□□□□ -1.58
CNOT4-209ENST00000473470 GRAMD1AQ96CP6 724 aa5.16□□□□□ -1.58
CNOT4-209ENST00000473470 GDF15Q99988 308 aa5.16□□□□□ -1.58
CNOT4-209ENST00000473470 NUDT22Q9BRQ3 303 aa5.16□□□□□ -1.58
CNOT4-209ENST00000473470 ADGRE3Q9BY15 652 aa5.16□□□□□ -1.58
CNOT4-209ENST00000473470 USP29Q9HBJ7 922 aa5.16□□□□□ -1.58
CNOT4-209ENST00000473470 PDGFCQ9NRA1 345 aa5.16□□□□□ -1.58
CNOT4-209ENST00000473470 TUBA8Q9NY65 449 aaPredicted RBP5.16□□□□□ -1.58
CNOT4-209ENST00000473470 SCAF8Q9UPN6 1271 aaKnown RBP5.16□□□□□ -1.58
CNOT4-209ENST00000473470 CEP83Q9Y592 693 aa5.16□□□□□ -1.58
CNOT4-209ENST00000473470 SPATA31A1Q5TZJ5 1347 aa5.16□□□□□ -1.58
CNOT4-209ENST00000473470 ADGRB2O60241 1585 aa5.16□□□□□ -1.58
CNOT4-209ENST00000473470 SMIM35A0A1B0GVV1 85 aa5.15□□□□□ -1.59
CNOT4-209ENST00000473470 OR2W5A6NFC9 320 aa5.15□□□□□ -1.59
CNOT4-209ENST00000473470 TMIGD3P0DMS9 266 aaPredicted RBP5.15□□□□□ -1.59
CNOT4-209ENST00000473470 GHRHRQ02643 423 aa5.15□□□□□ -1.59
CNOT4-209ENST00000473470 MTAPQ13126 283 aa5.15□□□□□ -1.59
CNOT4-209ENST00000473470 ATP1A4Q13733 1029 aa5.15□□□□□ -1.59
CNOT4-209ENST00000473470 STARD3Q14849 445 aa5.15□□□□□ -1.59
CNOT4-209ENST00000473470 TUBB8Q3ZCM7 444 aa5.15□□□□□ -1.59
CNOT4-209ENST00000473470 SUPT20HL1Q3ZLR7 823 aa5.15□□□□□ -1.59
CNOT4-209ENST00000473470 AASDHQ4L235 1098 aaPredicted RBP5.15□□□□□ -1.59
CNOT4-209ENST00000473470 TTC30AQ86WT1 665 aa5.15□□□□□ -1.59
CNOT4-209ENST00000473470 CLASRPQ8N2M8 674 aaKnown RBP5.15□□□□□ -1.59
CNOT4-209ENST00000473470 NKAPQ8N5F7 415 aaKnown RBP5.15□□□□□ -1.59
CNOT4-209ENST00000473470 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.15□□□□□ -1.59
CNOT4-209ENST00000473470 OVCA2Q8WZ82 227 aa5.15□□□□□ -1.59
CNOT4-209ENST00000473470 ZNF566Q969W8 418 aa5.15□□□□□ -1.59
CNOT4-209ENST00000473470 HERPUD2Q9BSE4 406 aa5.15□□□□□ -1.59
CNOT4-209ENST00000473470 KRTAP17-1Q9BYP8 105 aa5.15□□□□□ -1.59
CNOT4-209ENST00000473470 PPCSQ9HAB8 311 aa5.15□□□□□ -1.59
CNOT4-209ENST00000473470 NECTIN3Q9NQS3 549 aa5.15□□□□□ -1.59
CNOT4-209ENST00000473470 TM7SF3Q9NS93 570 aa5.15□□□□□ -1.59
CNOT4-209ENST00000473470 BTBD3Q9Y2F9 522 aa5.15□□□□□ -1.59
CNOT4-209ENST00000473470 TNFRSF18Q9Y5U5 241 aa5.15□□□□□ -1.59
CNOT4-209ENST00000473470 MYO5BQ9ULV0 1848 aa5.15□□□□□ -1.59
CNOT4-209ENST00000473470 EFCAB6Q5THR3 1501 aa5.14□□□□□ -1.59
CNOT4-209ENST00000473470 WDR91A4D1P6 747 aa5.14□□□□□ -1.59
CNOT4-209ENST00000473470 FFAR2O15552 330 aa5.14□□□□□ -1.59
CNOT4-209ENST00000473470 GLP2RO95838 553 aa5.14□□□□□ -1.59
CNOT4-209ENST00000473470 DRD1P21728 446 aa5.14□□□□□ -1.59
CNOT4-209ENST00000473470 MMP8P22894 467 aa5.14□□□□□ -1.59
CNOT4-209ENST00000473470 GABRB3P28472 473 aa5.14□□□□□ -1.59
CNOT4-209ENST00000473470 WDR5P61964 334 aaKnown RBP5.14□□□□□ -1.59
CNOT4-209ENST00000473470 HSF1Q00613 529 aa5.14□□□□□ -1.59
CNOT4-209ENST00000473470 ICA1Q05084 483 aa5.14□□□□□ -1.59
CNOT4-209ENST00000473470 DEUP1Q05D60 604 aa5.14□□□□□ -1.59
CNOT4-209ENST00000473470 DNASE1L3Q13609 305 aa5.14□□□□□ -1.59
CNOT4-209ENST00000473470 CBFBQ13951 182 aa5.14□□□□□ -1.59
CNOT4-209ENST00000473470 TRIM14Q14142 442 aa5.14□□□□□ -1.59
CNOT4-209ENST00000473470 KCNJ12Q14500 433 aa5.14□□□□□ -1.59
CNOT4-209ENST00000473470 PFKFB3Q16875 520 aaPredicted RBP5.14□□□□□ -1.59
CNOT4-209ENST00000473470 LRCH2Q5VUJ6 765 aa5.14□□□□□ -1.59
CNOT4-209ENST00000473470 ANO1Q5XXA6 986 aa5.14□□□□□ -1.59
CNOT4-209ENST00000473470 PGBD2Q6P3X8 592 aa5.14□□□□□ -1.59
CNOT4-209ENST00000473470 RANBP10Q6VN20 620 aa5.14□□□□□ -1.59
CNOT4-209ENST00000473470 EIF3CQ99613 913 aaKnown RBP5.14□□□□□ -1.59
CNOT4-209ENST00000473470 PCDHAC1Q9H158 963 aa5.14□□□□□ -1.59
CNOT4-209ENST00000473470 GJB4Q9NTQ9 266 aa5.14□□□□□ -1.59
CNOT4-209ENST00000473470 ARL8BQ9NVJ2 186 aa5.14□□□□□ -1.59
CNOT4-209ENST00000473470 RGL1Q9NZL6 768 aa5.14□□□□□ -1.59
CNOT4-209ENST00000473470 KLHL13Q9P2N7 655 aa5.14□□□□□ -1.59
CNOT4-209ENST00000473470 RNF7Q9UBF6 113 aa5.14□□□□□ -1.59
CNOT4-209ENST00000473470 MAN2B2Q9Y2E5 1009 aa5.14□□□□□ -1.59
CNOT4-209ENST00000473470 TMEM131LA2VDJ0 1609 aa5.14□□□□□ -1.59
CNOT4-209ENST00000473470 COL22A1Q8NFW1 1626 aaPredicted RBP5.14□□□□□ -1.59
CNOT4-209ENST00000473470 CLIP1P30622 1438 aa5.14□□□□□ -1.59
CNOT4-209ENST00000473470 C1orf167Q5SNV9 1468 aa5.13□□□□□ -1.59
CNOT4-209ENST00000473470 GOLGA6L3A6NEY3 463 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms