RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 OR2T3Q8NH03 318 aa9.75□□□□□ -0.85
VCL-204ENST00000472585 WFDC5Q8TCV5 224 aa9.75□□□□□ -0.85
VCL-204ENST00000472585 TAF4BQ92750 862 aa9.75□□□□□ -0.85
VCL-204ENST00000472585 NT5C1AQ9BXI3 368 aa9.75□□□□□ -0.85
VCL-204ENST00000472585 BACH2Q9BYV9 841 aa9.75□□□□□ -0.85
VCL-204ENST00000472585 CIPCQ9C0C6 399 aa9.75□□□□□ -0.85
VCL-204ENST00000472585 PNPLA8Q9NP80 782 aa9.75□□□□□ -0.85
VCL-204ENST00000472585 SERGEFQ9UGK8 458 aa9.75□□□□□ -0.85
VCL-204ENST00000472585 ZNF510Q9Y2H8 683 aa9.75□□□□□ -0.85
VCL-204ENST00000472585 UNC79Q9P2D8 2635 aa9.75□□□□□ -0.85
VCL-204ENST00000472585 CKAP5Q14008 2032 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 SLC12A8A0AV02 714 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 IKBKBO14920 756 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 STX6O43752 255 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 BRINP1O60477 761 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 CUTAO60888 179 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 TRIM49P0CI25 452 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 TRIM49CP0CI26 452 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 C6P13671 934 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 CD58P19256 250 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 ABCB4P21439 1286 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 MLLT3P42568 568 aaPredicted RBP9.74□□□□□ -0.85
VCL-204ENST00000472585 GCLMP48507 274 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 UCNP55089 124 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 C21orf59P57076 290 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 TMPRSS3P57727 454 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 DNAJC3Q13217 504 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 LY6DQ14210 128 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 TRIP4Q15650 581 aaPredicted RBP9.74□□□□□ -0.85
VCL-204ENST00000472585 ZNF394Q53GI3 561 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 ARHGAP40Q5TG30 622 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 PIGZQ86VD9 579 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 GATAD2AQ86YP4 633 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 FMNL3Q8IVF7 1028 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 SLC4A11Q8NBS3 891 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 DDI1Q8WTU0 396 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 SEMA4DQ92854 862 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 MYEOVQ96EZ4 313 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 MYO19Q96H55 970 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 CNDP2Q96KP4 475 aaKnown RBP9.74□□□□□ -0.85
VCL-204ENST00000472585 LMLNQ96KR4 655 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 SLC4A5Q9BY07 1137 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 SLC2A11Q9BYW1 496 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 LHX5Q9H2C1 402 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 ZSCAN16Q9H4T2 348 aaPredicted RBP9.74□□□□□ -0.85
VCL-204ENST00000472585 OSGEPQ9NPF4 335 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 MARCH2Q9P0N8 246 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 SERTAD1Q9UHV2 236 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 PCDHA7Q9UN72 937 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 VPS9D1Q9Y2B5 631 aa9.74□□□□□ -0.85
VCL-204ENST00000472585 USP9XQ93008 2570 aaPredicted RBP9.73□□□□□ -0.85
VCL-204ENST00000472585 GOLGA6L7A0A1B0GV03 622 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 PDXKO00764 312 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 TIMM44O43615 452 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 ACTN4O43707 911 aaKnown RBP9.73□□□□□ -0.85
VCL-204ENST00000472585 CLSTN1O94985 981 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 FSBPO95073 299 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 KIF20AO95235 890 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 SEMA4FO95754 770 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 NR3C1P04150 777 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 ITGAVP06756 1048 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 RALAP11233 206 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 CD27P26842 260 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 CD70P32970 193 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 PIK3CAP42336 1068 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 RAD23BP54727 409 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 MCCD1P59942 119 aaPredicted RBP9.73□□□□□ -0.85
VCL-204ENST00000472585 ARID5AQ03989 594 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 KCNJ12Q14500 433 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 EIF4HQ15056 248 aaKnown RBP9.73□□□□□ -0.85
VCL-204ENST00000472585 TSR1Q2NL82 804 aaKnown RBP9.73□□□□□ -0.85
VCL-204ENST00000472585 TBC1D25Q3MII6 688 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 FOXD4L6Q3SYB3 417 aaPredicted RBP9.73□□□□□ -0.85
VCL-204ENST00000472585 KMT5BQ4FZB7 885 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 FOXD4L5Q5VV16 416 aaPredicted RBP9.73□□□□□ -0.85
VCL-204ENST00000472585 RESP18Q5W5W9 173 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 PM20D1Q6GTS8 502 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 SERPINA13PQ6UXR4 307 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 FOXD4L3Q6VB84 417 aaPredicted RBP9.73□□□□□ -0.85
VCL-204ENST00000472585 CHST9Q7L1S5 443 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 ZNF248Q8NDW4 579 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 FOXD4L4Q8WXT5 416 aaPredicted RBP9.73□□□□□ -0.85
VCL-204ENST00000472585 SKA1Q96BD8 255 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 PAGE5Q96GU1 130 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 NAF1Q96HR8 494 aaKnown RBP9.73□□□□□ -0.85
VCL-204ENST00000472585 HEXIM2Q96MH2 286 aaKnown RBP9.73□□□□□ -0.85
VCL-204ENST00000472585 ACE2Q9BYF1 805 aaPredicted RBP9.73□□□□□ -0.85
VCL-204ENST00000472585 DCLK3Q9C098 648 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 CYP3A43Q9HB55 503 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 ABCB8Q9NUT2 735 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 SFMBT1Q9UHJ3 866 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 STOML2Q9UJZ1 356 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 COL12A1Q99715 3063 aa9.73□□□□□ -0.85
VCL-204ENST00000472585 A0A1B0GTQ1 180 aa9.72□□□□□ -0.85
VCL-204ENST00000472585 PAPSS1O43252 624 aaPredicted RBP9.72□□□□□ -0.85
VCL-204ENST00000472585 NTRK1P04629 796 aa9.72□□□□□ -0.85
VCL-204ENST00000472585 PDIA4P13667 645 aaKnown RBP9.72□□□□□ -0.85
VCL-204ENST00000472585 P4HA1P13674 534 aa9.72□□□□□ -0.85
VCL-204ENST00000472585 GLDCP23378 1020 aa9.72□□□□□ -0.85
VCL-204ENST00000472585 SLC6A4P31645 630 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms