RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-214ENST00000472398 OR2T34Q8NGX1 318 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 AKR7LQ8NHP1 331 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 CLHC1Q8NHS4 586 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 KIF18AQ8NI77 898 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 SLC26A7Q8TE54 656 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 CHURC1Q8WUH1 139 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 LMBR1Q8WVP7 490 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 ASZ1Q8WWH4 475 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 PMEPA1Q969W9 287 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 GTPBP3Q969Y2 492 aaKnown RBP3.35□□□□□ -1.87
TTC3-214ENST00000472398 ACSBG1Q96GR2 724 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 SPATA13Q96N96 652 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 OR1F2PQ96R84 312 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 NR1H4Q96RI1 486 aaPredicted RBP3.35□□□□□ -1.87
TTC3-214ENST00000472398 LMF1Q96S06 567 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 CGRRF1Q99675 332 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 KCNJ15Q99712 375 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 METTL22Q9BUU2 404 aaPredicted RBP3.35□□□□□ -1.87
TTC3-214ENST00000472398 SF3B5Q9BWJ5 86 aaKnown RBP3.35□□□□□ -1.87
TTC3-214ENST00000472398 CACNG6Q9BXT2 260 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 ABCG8Q9H221 673 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 SUV39H2Q9H5I1 410 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 LRRC19Q9H756 370 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 MRPL40Q9NQ50 206 aaKnown RBP3.35□□□□□ -1.87
TTC3-214ENST00000472398 RBM12Q9NTZ6 932 aaKnown RBP3.35□□□□□ -1.87
TTC3-214ENST00000472398 PAQR5Q9NXK6 330 aaPredicted RBP3.35□□□□□ -1.87
TTC3-214ENST00000472398 DDX43Q9NXZ2 648 aaKnown RBP3.35□□□□□ -1.87
TTC3-214ENST00000472398 CYP39A1Q9NYL5 469 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 CFAP97Q9P2B7 532 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 PAIP2BQ9ULR5 123 aaKnown RBP3.35□□□□□ -1.87
TTC3-214ENST00000472398 PADI4Q9UM07 663 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 PCDHA11Q9Y5I1 949 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 DMRT1Q9Y5R6 373 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 NCOA3Q9Y6Q9 1424 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 IRS2Q9Y4H2 1338 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.35□□□□□ -1.87
TTC3-214ENST00000472398 FAM47DPA6NHR8 397 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 HMX3A6NHT5 357 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 WDR64B1ANS9 1081 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 ZNF879B4DU55 563 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 KIF28PB7ZC32 967 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 NFKBIEO00221 500 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 CBX4O00257 560 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 DNM1LO00429 736 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 CASC3O15234 703 aaKnown RBP3.35□□□□□ -1.87
TTC3-214ENST00000472398 RAD51BO15315 384 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 TGFB1I1O43294 461 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 DNAJA2O60884 412 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 CILPO75339 1184 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 RBBP9O75884 186 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 HEXIM1O94992 359 aaKnown RBP3.35□□□□□ -1.87
TTC3-214ENST00000472398 AKR7A3O95154 331 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 CYP2E1P05181 493 aaPredicted RBP3.35□□□□□ -1.87
TTC3-214ENST00000472398 LIPFP07098 398 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 THP07101 528 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 IVLP07476 585 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 ERVK-10P10266 1014 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 RLBP1P12271 317 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 LAMP2P13473 410 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 NAGAP17050 411 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 CTRB1P17538 263 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 CPT2P23786 658 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 IL32P24001 234 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 PCGF2P35227 344 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 NUP62P37198 522 aaPredicted RBP3.35□□□□□ -1.87
TTC3-214ENST00000472398 KCNC1P48547 511 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 CEBPAP49715 358 aaPredicted RBP3.35□□□□□ -1.87
TTC3-214ENST00000472398 CYP27A1Q02318 531 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 SPEM2Q0P670 501 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 ZNF177Q13360 481 aaPredicted RBP3.35□□□□□ -1.87
TTC3-214ENST00000472398 SLC12A1Q13621 1099 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 THOC5Q13769 683 aaKnown RBP3.35□□□□□ -1.87
TTC3-214ENST00000472398 DDX39BQ13838 428 aaKnown RBP3.35□□□□□ -1.87
TTC3-214ENST00000472398 CAPSQ13938 189 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 E2F2Q14209 437 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 NCAPHQ15003 741 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 SLC39A14Q15043 492 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 PON2Q15165 354 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 NTRK3Q16288 839 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 MEP1BQ16820 701 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 GLRA4Q5JXX5 417 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 PEAR1Q5VY43 1037 aaPredicted RBP3.35□□□□□ -1.87
TTC3-214ENST00000472398 CTRB2Q6GPI1 263 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 TANGO2Q6ICL3 276 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 MFSD5Q6N075 450 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 LRRC31Q6UY01 552 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 MACC1Q6ZN28 852 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 UNC5AQ6ZN44 842 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 CACNA2D4Q7Z3S7 1137 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 ZNF438Q7Z4V0 828 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 SLC51AQ86UW1 340 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 RFX6Q8HWS3 928 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 RDM1Q8NG50 284 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 CSGALNACT1Q8TDX6 532 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 HASPINQ8TF76 798 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 MRPS27Q92552 414 aaKnown RBP3.35□□□□□ -1.87
TTC3-214ENST00000472398 DDX17Q92841 729 aaKnown RBP3.35□□□□□ -1.87
TTC3-214ENST00000472398 NT5C3BQ969T7 300 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 LRRC39Q96DD0 335 aa3.35□□□□□ -1.87
TTC3-214ENST00000472398 C1GALT1C1Q96EU7 318 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms