RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 PNLIPRP1P54315 467 aa7.67□□□□□ -1.18
SGCE-210ENST00000472326 OS9Q13438 667 aaPredicted RBP7.67□□□□□ -1.18
SGCE-210ENST00000472326 BIRC2Q13490 618 aa7.67□□□□□ -1.18
SGCE-210ENST00000472326 BLMHQ13867 455 aa7.67□□□□□ -1.18
SGCE-210ENST00000472326 RBMS2Q15434 407 aaKnown RBP7.67□□□□□ -1.18
SGCE-210ENST00000472326 C10orf25Q5T742 122 aa7.67□□□□□ -1.18
SGCE-210ENST00000472326 ATPAF1Q5TC12 328 aaPredicted RBP7.67□□□□□ -1.18
SGCE-210ENST00000472326 PXDC1Q5TGL8 231 aa7.67□□□□□ -1.18
SGCE-210ENST00000472326 KLHL17Q6TDP4 642 aa7.67□□□□□ -1.18
SGCE-210ENST00000472326 ZNF793Q6ZN11 406 aa7.67□□□□□ -1.18
SGCE-210ENST00000472326 CLEC4CQ8WTT0 213 aa7.67□□□□□ -1.18
SGCE-210ENST00000472326 EID2BQ96D98 161 aa7.67□□□□□ -1.18
SGCE-210ENST00000472326 BRD8Q9H0E9 1235 aa7.67□□□□□ -1.18
SGCE-210ENST00000472326 SEPSECSQ9HD40 501 aaKnown RBP7.67□□□□□ -1.18
SGCE-210ENST00000472326 HERC5Q9UII4 1024 aaKnown RBP7.67□□□□□ -1.18
SGCE-210ENST00000472326 NFU1Q9UMS0 254 aa7.67□□□□□ -1.18
SGCE-210ENST00000472326 DAPP1Q9UN19 280 aa7.67□□□□□ -1.18
SGCE-210ENST00000472326 SPATA31A5Q5VU36 1347 aa7.67□□□□□ -1.18
SGCE-210ENST00000472326 EMSYQ7Z589 1322 aa7.67□□□□□ -1.18
SGCE-210ENST00000472326 SPATA31A7Q8IWB4 1347 aa7.67□□□□□ -1.18
SGCE-210ENST00000472326 MOSPD3O75425 235 aa7.66□□□□□ -1.18
SGCE-210ENST00000472326 CNTN5O94779 1100 aa7.66□□□□□ -1.18
SGCE-210ENST00000472326 ALDOAP04075 364 aaKnown RBP7.66□□□□□ -1.18
SGCE-210ENST00000472326 AKR1A1P14550 325 aa7.66□□□□□ -1.18
SGCE-210ENST00000472326 TRIM60Q495X7 471 aa7.66□□□□□ -1.18
SGCE-210ENST00000472326 GLE1Q53GS7 698 aaKnown RBP7.66□□□□□ -1.18
SGCE-210ENST00000472326 ZNF474Q6S9Z5 364 aaPredicted RBP7.66□□□□□ -1.18
SGCE-210ENST00000472326 ANKRD13BQ86YJ7 626 aa7.66□□□□□ -1.18
SGCE-210ENST00000472326 SLC44A2Q8IWA5 706 aaPredicted RBP7.66□□□□□ -1.18
SGCE-210ENST00000472326 ADGRF4Q8IZF3 695 aa7.66□□□□□ -1.18
SGCE-210ENST00000472326 CACNA2D3Q8IZS8 1091 aa7.66□□□□□ -1.18
SGCE-210ENST00000472326 ARL14EPQ8N8R7 260 aaPredicted RBP7.66□□□□□ -1.18
SGCE-210ENST00000472326 C16orf52Q8NHV5 167 aa7.66□□□□□ -1.18
SGCE-210ENST00000472326 SORBS1Q9BX66 1292 aaKnown RBP7.66□□□□□ -1.18
SGCE-210ENST00000472326 OSBPL5Q9H0X9 879 aaPredicted RBP7.66□□□□□ -1.18
SGCE-210ENST00000472326 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.66□□□□□ -1.18
SGCE-210ENST00000472326 TMEM45AQ9NWC5 275 aa7.66□□□□□ -1.18
SGCE-210ENST00000472326 GRHPRQ9UBQ7 328 aa7.66□□□□□ -1.18
SGCE-210ENST00000472326 LZTS1Q9Y250 596 aa7.66□□□□□ -1.18
SGCE-210ENST00000472326 ZNF521Q96K83 1311 aa7.66□□□□□ -1.18
SGCE-210ENST00000472326 TBC1D3DA0A087WVF3 549 aa7.65□□□□□ -1.18
SGCE-210ENST00000472326 TBC1D3IA0A087WXS9 549 aa7.65□□□□□ -1.18
SGCE-210ENST00000472326 TBC1D3EA0A087X179 549 aa7.65□□□□□ -1.18
SGCE-210ENST00000472326 TBC1D3KA0A087X1G2 549 aa7.65□□□□□ -1.18
SGCE-210ENST00000472326 TBC1D3BA6NDS4 549 aa7.65□□□□□ -1.18
SGCE-210ENST00000472326 TBC1D3FA6NER0 549 aaPredicted RBP7.65□□□□□ -1.18
SGCE-210ENST00000472326 AGAP5A6NIR3 686 aa7.65□□□□□ -1.18
SGCE-210ENST00000472326 TBC1D3LB9A6J9 549 aa7.65□□□□□ -1.18
SGCE-210ENST00000472326 FGBP02675 491 aa7.65□□□□□ -1.18
SGCE-210ENST00000472326 TBC1D3HP0C7X1 549 aa7.65□□□□□ -1.18
SGCE-210ENST00000472326 SLC12A2P55011 1212 aa7.65□□□□□ -1.18
SGCE-210ENST00000472326 AP2B1P63010 937 aa7.65□□□□□ -1.18
SGCE-210ENST00000472326 RBM6P78332 1123 aaKnown RBP7.65□□□□□ -1.18
SGCE-210ENST00000472326 TLE3Q04726 772 aa7.65□□□□□ -1.18
SGCE-210ENST00000472326 LIPMQ5VYY2 423 aa7.65□□□□□ -1.18
SGCE-210ENST00000472326 TBC1D3GQ6DHY5 549 aa7.65□□□□□ -1.18
SGCE-210ENST00000472326 TBC1D3CQ6IPX1 549 aa7.65□□□□□ -1.18
SGCE-210ENST00000472326 CCDC117Q8IWD4 279 aaPredicted RBP7.65□□□□□ -1.18
SGCE-210ENST00000472326 ADGRF3Q8IZF5 1079 aa7.65□□□□□ -1.18
SGCE-210ENST00000472326 TBC1D3Q8IZP1 549 aaPredicted RBP7.65□□□□□ -1.18
SGCE-210ENST00000472326 KAT2BQ92831 832 aa7.65□□□□□ -1.18
SGCE-210ENST00000472326 ZNF347Q96SE7 839 aa7.65□□□□□ -1.18
SGCE-210ENST00000472326 MAGEH1Q9H213 219 aa7.65□□□□□ -1.18
SGCE-210ENST00000472326 PABPC3Q9H361 631 aaKnown RBP7.65□□□□□ -1.18
SGCE-210ENST00000472326 PRDM8Q9NQV8 689 aa7.65□□□□□ -1.18
SGCE-210ENST00000472326 AFG3L2Q9Y4W6 797 aa7.65□□□□□ -1.18
SGCE-210ENST00000472326 UGDHO60701 494 aa7.64□□□□□ -1.19
SGCE-210ENST00000472326 LARGE1O95461 756 aa7.64□□□□□ -1.19
SGCE-210ENST00000472326 LDHAP00338 332 aaKnown RBP7.64□□□□□ -1.19
SGCE-210ENST00000472326 ALDOCP09972 364 aaKnown RBP7.64□□□□□ -1.19
SGCE-210ENST00000472326 PRF1P14222 555 aa7.64□□□□□ -1.19
SGCE-210ENST00000472326 TFEBP19484 476 aa7.64□□□□□ -1.19
SGCE-210ENST00000472326 CHKAP35790 457 aa7.64□□□□□ -1.19
SGCE-210ENST00000472326 TRAPPC10P48553 1259 aa7.64□□□□□ -1.19
SGCE-210ENST00000472326 DEF8Q6ZN54 512 aa7.64□□□□□ -1.19
SGCE-210ENST00000472326 FAM57BQ71RH2 274 aa7.64□□□□□ -1.19
SGCE-210ENST00000472326 RRAGAQ7L523 313 aa7.64□□□□□ -1.19
SGCE-210ENST00000472326 UBE2Q1Q7Z7E8 422 aa7.64□□□□□ -1.19
SGCE-210ENST00000472326 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.64□□□□□ -1.19
SGCE-210ENST00000472326 ENAHQ8N8S7 591 aaPredicted RBP7.64□□□□□ -1.19
SGCE-210ENST00000472326 STT3BQ8TCJ2 826 aa7.64□□□□□ -1.19
SGCE-210ENST00000472326 SCARB1Q8WTV0 552 aa7.64□□□□□ -1.19
SGCE-210ENST00000472326 RSC1A1Q92681 617 aa7.64□□□□□ -1.19
SGCE-210ENST00000472326 ELAC1Q9H777 363 aaKnown RBP7.64□□□□□ -1.19
SGCE-210ENST00000472326 LIN7CQ9NUP9 197 aaKnown RBP7.64□□□□□ -1.19
SGCE-210ENST00000472326 ZMYM2Q9UBW7 1377 aa7.63□□□□□ -1.19
SGCE-210ENST00000472326 SETD1BQ9UPS6 1966 aaKnown RBP7.63□□□□□ -1.19
SGCE-210ENST00000472326 USP12O75317 370 aa7.63□□□□□ -1.19
SGCE-210ENST00000472326 CYP3A4P08684 503 aa7.63□□□□□ -1.19
SGCE-210ENST00000472326 PGM5Q15124 567 aa7.63□□□□□ -1.19
SGCE-210ENST00000472326 RPS6KA2Q15349 733 aa7.63□□□□□ -1.19
SGCE-210ENST00000472326 TIGD6Q17RP2 521 aa7.63□□□□□ -1.19
SGCE-210ENST00000472326 NFRKBQ6P4R8 1299 aa7.63□□□□□ -1.19
SGCE-210ENST00000472326 NRACQ8N912 160 aa7.63□□□□□ -1.19
SGCE-210ENST00000472326 PIGOQ8TEQ8 1089 aa7.63□□□□□ -1.19
SGCE-210ENST00000472326 ZFPM2Q8WW38 1151 aa7.63□□□□□ -1.19
SGCE-210ENST00000472326 C3orf49Q96BT1 292 aa7.63□□□□□ -1.19
SGCE-210ENST00000472326 ZNF48Q96MX3 618 aaPredicted RBP7.63□□□□□ -1.19
SGCE-210ENST00000472326 HEY2Q9UBP5 337 aa7.63□□□□□ -1.19
SGCE-210ENST00000472326 PCDHA10Q9Y5I2 948 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms