RNA–Protein interactions for RNA: ENST00000471396.1

TRIM59-204, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-204ENST00000471396 C2CD6Q53TS8 623 aa7.95□□□□□ -1.14
TRIM59-204ENST00000471396 ZC3H12AQ5D1E8 599 aaKnown RBP7.95□□□□□ -1.14
TRIM59-204ENST00000471396 FIGNQ5HY92 759 aa7.95□□□□□ -1.14
TRIM59-204ENST00000471396 EOGTQ5NDL2 527 aa7.95□□□□□ -1.14
TRIM59-204ENST00000471396 MPP7Q5T2T1 576 aa7.95□□□□□ -1.14
TRIM59-204ENST00000471396 OTUD1Q5VV17 481 aaPredicted RBP7.95□□□□□ -1.14
TRIM59-204ENST00000471396 RNF43Q68DV7 783 aa7.95□□□□□ -1.14
TRIM59-204ENST00000471396 NADSYN1Q6IA69 706 aa7.95□□□□□ -1.14
TRIM59-204ENST00000471396 RFWD3Q6PCD5 774 aa7.95□□□□□ -1.14
TRIM59-204ENST00000471396 LRSAM1Q6UWE0 723 aa7.95□□□□□ -1.14
TRIM59-204ENST00000471396 MMS22LQ6ZRQ5 1243 aa7.95□□□□□ -1.14
TRIM59-204ENST00000471396 TRMT11Q7Z4G4 463 aaKnown RBP7.95□□□□□ -1.14
TRIM59-204ENST00000471396 ANKS1BQ7Z6G8 1248 aa7.95□□□□□ -1.14
TRIM59-204ENST00000471396 LONP2Q86WA8 852 aa7.95□□□□□ -1.14
TRIM59-204ENST00000471396 PHF13Q86YI8 300 aaPredicted RBP7.95□□□□□ -1.14
TRIM59-204ENST00000471396 CCDC33Q8N5R6 958 aa7.95□□□□□ -1.14
TRIM59-204ENST00000471396 CAMKK1Q8N5S9 505 aa7.95□□□□□ -1.14
TRIM59-204ENST00000471396 ALLCQ8N6M5 410 aa7.95□□□□□ -1.14
TRIM59-204ENST00000471396 ATP6V0D2Q8N8Y2 350 aa7.95□□□□□ -1.14
TRIM59-204ENST00000471396 ZNF557Q8N988 423 aaPredicted RBP7.95□□□□□ -1.14
TRIM59-204ENST00000471396 IL17RCQ8NAC3 791 aa7.95□□□□□ -1.14
TRIM59-204ENST00000471396 HJURPQ8NCD3 748 aaPredicted RBP7.95□□□□□ -1.14
TRIM59-204ENST00000471396 TSTD1Q8NFU3 115 aa7.95□□□□□ -1.14
TRIM59-204ENST00000471396 BTN2A3PQ96KV6 586 aa7.95□□□□□ -1.14
TRIM59-204ENST00000471396 PRICKLE1Q96MT3 831 aaPredicted RBP7.95□□□□□ -1.14
TRIM59-204ENST00000471396 HHIPQ96QV1 700 aa7.95□□□□□ -1.14
TRIM59-204ENST00000471396 PCDHB18PQ96TA0 734 aa7.95□□□□□ -1.14
TRIM59-204ENST00000471396 AGPAT1Q99943 283 aa7.95□□□□□ -1.14
TRIM59-204ENST00000471396 ZMYND15Q9H091 742 aa7.95□□□□□ -1.14
TRIM59-204ENST00000471396 NUCKS1Q9H1E3 243 aaKnown RBP7.95□□□□□ -1.14
TRIM59-204ENST00000471396 EPC1Q9H2F5 836 aa7.95□□□□□ -1.14
TRIM59-204ENST00000471396 TSPY26PQ9H489 355 aa7.95□□□□□ -1.14
TRIM59-204ENST00000471396 SEPT11Q9NVA2 429 aaKnown RBP7.95□□□□□ -1.14
TRIM59-204ENST00000471396 POLR3BQ9NW08 1133 aaPredicted RBP7.95□□□□□ -1.14
TRIM59-204ENST00000471396 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.95□□□□□ -1.14
TRIM59-204ENST00000471396 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.95□□□□□ -1.14
TRIM59-204ENST00000471396 XPO7Q9UIA9 1087 aaKnown RBP7.95□□□□□ -1.14
TRIM59-204ENST00000471396 STARD13Q9Y3M8 1113 aa7.95□□□□□ -1.14
TRIM59-204ENST00000471396 VPS13AQ96RL7 3174 aa7.95□□□□□ -1.14
TRIM59-204ENST00000471396 SPTBN2O15020 2390 aa7.95□□□□□ -1.14
TRIM59-204ENST00000471396 SYNJ2BP-COX16A0A087WUM0 186 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 TYW5A2RUC4 315 aaKnown RBP7.94□□□□□ -1.14
TRIM59-204ENST00000471396 LRRC53A6NM62 1247 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 KCNU1A8MYU2 1149 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 PRRT4C9JH25 899 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 F5H5T6 163 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 M0QYT0 321 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 SGK1O00141 431 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 GFRA3O60609 400 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 TBL1XO60907 577 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 ADAM23O75077 832 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 F9P00740 461 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 LMNAP02545 664 aaKnown RBP7.94□□□□□ -1.14
TRIM59-204ENST00000471396 TPM3P06753 285 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 ABCB4P21439 1286 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 TACR2P21452 398 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 HOXC13P31276 330 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 CNR2P34972 360 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 PBX1P40424 430 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 SGSHP51688 502 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 DGKEP52429 567 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 GSCP56915 257 aaPredicted RBP7.94□□□□□ -1.14
TRIM59-204ENST00000471396 RNASE9P60153 205 aaKnown RBP7.94□□□□□ -1.14
TRIM59-204ENST00000471396 NME3Q13232 169 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 CRY1Q16526 586 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 GEN1Q17RS7 908 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 SLC25A52Q3SY17 297 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 MS4A13Q5J8X5 152 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 EMC10Q5UCC4 262 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 PIK3R6Q5UE93 754 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 SFMBT2Q5VUG0 894 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 EGFLAMQ63HQ2 1017 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 E4F1Q66K89 784 aaPredicted RBP7.94□□□□□ -1.14
TRIM59-204ENST00000471396 RAP1GAP2Q684P5 730 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 HEATR6Q6AI08 1181 aaKnown RBP7.94□□□□□ -1.14
TRIM59-204ENST00000471396 ARCQ7LC44 396 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 IRF2BP2Q7Z5L9 587 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 WDR5BQ86VZ2 330 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 CHSY1Q86X52 802 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 CHPFQ8IZ52 775 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.94□□□□□ -1.14
TRIM59-204ENST00000471396 ZNF513Q8N8E2 541 aaPredicted RBP7.94□□□□□ -1.14
TRIM59-204ENST00000471396 TXNDC5Q8NBS9 432 aaKnown RBP7.94□□□□□ -1.14
TRIM59-204ENST00000471396 SLC30A5Q8TAD4 765 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 OLIG1Q8TAK6 271 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 WFIKKN2Q8TEU8 576 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 RNF34Q969K3 372 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 NT5C3BQ969T7 300 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 IQCDQ96DY2 449 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 TMA16Q96EY4 203 aaKnown RBP7.94□□□□□ -1.14
TRIM59-204ENST00000471396 PGAP3Q96FM1 320 aaPredicted RBP7.94□□□□□ -1.14
TRIM59-204ENST00000471396 NPY6RQ99463 290 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 USB1Q9BQ65 265 aaKnown RBP7.94□□□□□ -1.14
TRIM59-204ENST00000471396 SYT11Q9BT88 431 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 NUP58Q9BVL2 599 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 ZDHHC4Q9NPG8 344 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 METTL5Q9NRN9 209 aaKnown RBP7.94□□□□□ -1.14
TRIM59-204ENST00000471396 TMEM51Q9NW97 253 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 ADAM22Q9P0K1 906 aa7.94□□□□□ -1.14
TRIM59-204ENST00000471396 COX16Q9P0S2 106 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms