RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 SCML1Q9UN30 329 aa9.33□□□□□ -0.92
SYNGAP1-205ENST00000470232 COL12A1Q99715 3063 aa9.33□□□□□ -0.92
SYNGAP1-205ENST00000470232 A0A1W2PPC4 97 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 PYCARD-AS1I3L0S3 204 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 CBX4O00257 560 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 BIN1O00499 593 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 SNPHO15079 494 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 KLK10O43240 276 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 NRDCO43847 1150 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 CUTAO60888 179 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 RNASEH1O60930 286 aaKnown RBP9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 PPP6R2O75170 966 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 BMP15O95972 392 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 MT-CO3P00414 261 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 CST3P01034 146 aaPredicted RBP9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 RARGP13631 454 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 PRKCHP24723 683 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 CD38P28907 300 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 ATICP31939 592 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 SYKP43405 635 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 PDE4CQ08493 712 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 KCNA1Q09470 495 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 ARID5BQ14865 1188 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 SYCP1Q15431 976 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 KCNT1Q5JUK3 1230 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 C10orf120Q5SQS8 335 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 PRAMEF14Q5SWL7 426 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 FYB2Q5VWT5 728 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 CEP135Q66GS9 1140 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 KIAA0895LQ68EN5 471 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 LAYNQ6UX15 382 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 XKR5Q6UX68 686 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 KDM7AQ6ZMT4 941 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 Q6ZNB5 142 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 STXBP4Q6ZWJ1 553 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 SV2BQ7L1I2 683 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 FAM35AQ86V20 835 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 DCBLD1Q8N8Z6 715 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 CCDC112Q8NEF3 446 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 DDI1Q8WTU0 396 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 SNRNP27Q8WVK2 155 aaKnown RBP9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 TTC9Q92623 222 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 AASDHPPTQ9NRN7 309 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 IGSF5Q9NSI5 407 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 TBC1D7Q9P0N9 293 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 SCML2Q9UQR0 700 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 PAXBP1Q9Y5B6 917 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 SLCO1B1Q9Y6L6 691 aa9.32□□□□□ -0.92
SYNGAP1-205ENST00000470232 CKAP5Q14008 2032 aa9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 LRRC72A6NJI9 287 aa9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 CBFA2T2O43439 604 aa9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 MAGEC1O60732 1142 aa9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 CLSTN1O94985 981 aa9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 STAU1O95793 577 aaKnown RBP9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 RALAP11233 206 aa9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 SKILP12757 684 aa9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 ACP1P24666 158 aa9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 RPS14P62263 151 aaKnown RBP9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 CCZ1BP86790 482 aa9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 CCZ1P86791 482 aaPredicted RBP9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 INSM1Q01101 510 aaPredicted RBP9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 DPCR1Q3MIW9 517 aa9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 SGO2Q562F6 1265 aa9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 COLEC12Q5KU26 742 aa9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 LCE2DQ5TA82 110 aaPredicted RBP9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 ZNF776Q68DI1 518 aaPredicted RBP9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 ZNF574Q6ZN55 896 aaPredicted RBP9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 USP30Q70CQ3 517 aa9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 ZNF276Q8N554 614 aa9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 WFIKKN2Q8TEU8 576 aa9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 ANKRD7Q92527 254 aa9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 ZNF592Q92610 1267 aa9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 FAM84AQ96KN4 292 aa9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 ERVMER34-1Q9H9K5 563 aa9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 OLFML3Q9NRN5 406 aa9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 THSD1Q9NS62 852 aa9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 IFNKQ9P0W0 207 aa9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 STK17AQ9UEE5 414 aa9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 PCDHA5Q9Y5H7 936 aa9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 NUMA1Q14980 2115 aa9.31□□□□□ -0.92
SYNGAP1-205ENST00000470232 FAM47DPA6NHR8 397 aa9.3□□□□□ -0.92
SYNGAP1-205ENST00000470232 KIF2AO00139 706 aaPredicted RBP9.3□□□□□ -0.92
SYNGAP1-205ENST00000470232 TLR4O00206 839 aa9.3□□□□□ -0.92
SYNGAP1-205ENST00000470232 CTIFO43310 598 aaKnown RBP9.3□□□□□ -0.92
SYNGAP1-205ENST00000470232 PHACTR2O75167 634 aa9.3□□□□□ -0.92
SYNGAP1-205ENST00000470232 STC2O76061 302 aa9.3□□□□□ -0.92
SYNGAP1-205ENST00000470232 DXOO77932 396 aaKnown RBP9.3□□□□□ -0.92
SYNGAP1-205ENST00000470232 ATP5BP06576 529 aaKnown RBP9.3□□□□□ -0.92
SYNGAP1-205ENST00000470232 DLATP10515 647 aaKnown RBP9.3□□□□□ -0.92
SYNGAP1-205ENST00000470232 P4HA1P13674 534 aa9.3□□□□□ -0.92
SYNGAP1-205ENST00000470232 IDEP14735 1019 aa9.3□□□□□ -0.92
SYNGAP1-205ENST00000470232 EPHA8P29322 1005 aaPredicted RBP9.3□□□□□ -0.92
SYNGAP1-205ENST00000470232 RXRGP48443 463 aa9.3□□□□□ -0.92
SYNGAP1-205ENST00000470232 LSSP48449 732 aa9.3□□□□□ -0.92
SYNGAP1-205ENST00000470232 MAP3K7CLP57077 242 aa9.3□□□□□ -0.92
SYNGAP1-205ENST00000470232 FANCCQ00597 558 aa9.3□□□□□ -0.92
SYNGAP1-205ENST00000470232 RESP18Q5W5W9 173 aa9.3□□□□□ -0.92
SYNGAP1-205ENST00000470232 PAQR9Q6ZVX9 377 aa9.3□□□□□ -0.92
SYNGAP1-205ENST00000470232 CPXM2Q8N436 756 aa9.3□□□□□ -0.92
SYNGAP1-205ENST00000470232 SORCS1Q8WY21 1168 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms