RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 POLR2EP19388 210 aaKnown RBP18.17■□□□□ 0.5
COL7A1-208ENST00000470076 SLC6A4P31645 630 aa18.17■□□□□ 0.5
COL7A1-208ENST00000470076 RPL34P49207 117 aaKnown RBP18.17■□□□□ 0.5
COL7A1-208ENST00000470076 FAM193AP78312 1265 aa18.17■□□□□ 0.5
COL7A1-208ENST00000470076 NNTQ13423 1086 aa18.17■□□□□ 0.5
COL7A1-208ENST00000470076 ZNF423Q2M1K9 1284 aa18.17■□□□□ 0.5
COL7A1-208ENST00000470076 FAM124AQ86V42 546 aa18.17■□□□□ 0.5
COL7A1-208ENST00000470076 HJURPQ8NCD3 748 aaPredicted RBP18.17■□□□□ 0.5
COL7A1-208ENST00000470076 SERPINB11Q96P15 392 aa18.17■□□□□ 0.5
COL7A1-208ENST00000470076 MIS12Q9H081 205 aa18.17■□□□□ 0.5
COL7A1-208ENST00000470076 SUN2Q9UH99 717 aa18.17■□□□□ 0.5
COL7A1-208ENST00000470076 EIF2B4Q9UI10 523 aaKnown RBP18.17■□□□□ 0.5
COL7A1-208ENST00000470076 CNTN6Q9UQ52 1028 aa18.17■□□□□ 0.5
COL7A1-208ENST00000470076 CTNND2Q9UQB3 1225 aa18.17■□□□□ 0.5
COL7A1-208ENST00000470076 MSRB2Q9Y3D2 182 aa18.17■□□□□ 0.5
COL7A1-208ENST00000470076 PCDHB9Q9Y5E1 797 aa18.17■□□□□ 0.5
COL7A1-208ENST00000470076 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.17■□□□□ 0.5
COL7A1-208ENST00000470076 GOLGA6L7A0A1B0GV03 622 aa18.16■□□□□ 0.5
COL7A1-208ENST00000470076 SH3BP5O60239 455 aa18.16■□□□□ 0.5
COL7A1-208ENST00000470076 CALCAP01258 141 aa18.16■□□□□ 0.5
COL7A1-208ENST00000470076 CD70P32970 193 aa18.16■□□□□ 0.5
COL7A1-208ENST00000470076 GPD2P43304 727 aa18.16■□□□□ 0.5
COL7A1-208ENST00000470076 ACADSBP45954 432 aa18.16■□□□□ 0.5
COL7A1-208ENST00000470076 PAK1Q13153 545 aa18.16■□□□□ 0.5
COL7A1-208ENST00000470076 TRIP6Q15654 476 aaKnown RBP18.16■□□□□ 0.5
COL7A1-208ENST00000470076 MEA1Q16626 185 aa18.16■□□□□ 0.5
COL7A1-208ENST00000470076 IL27RAQ6UWB1 636 aa18.16■□□□□ 0.5
COL7A1-208ENST00000470076 BEND5Q7L4P6 421 aa18.16■□□□□ 0.5
COL7A1-208ENST00000470076 NAXDQ8IW45 347 aa18.16■□□□□ 0.5
COL7A1-208ENST00000470076 MFN1Q8IWA4 741 aa18.16■□□□□ 0.5
COL7A1-208ENST00000470076 SCUBE3Q8IX30 993 aa18.16■□□□□ 0.5
COL7A1-208ENST00000470076 ZNF366Q8N895 744 aa18.16■□□□□ 0.5
COL7A1-208ENST00000470076 FIBINQ8TAL6 211 aa18.16■□□□□ 0.5
COL7A1-208ENST00000470076 WFDC5Q8TCV5 224 aa18.16■□□□□ 0.5
COL7A1-208ENST00000470076 DQX1Q8TE96 717 aaKnown RBP18.16■□□□□ 0.5
COL7A1-208ENST00000470076 KREMEN1Q96MU8 473 aa18.16■□□□□ 0.5
COL7A1-208ENST00000470076 TRIM62Q9BVG3 475 aa18.16■□□□□ 0.5
COL7A1-208ENST00000470076 PRSS16Q9NQE7 514 aa18.16■□□□□ 0.5
COL7A1-208ENST00000470076 ST7Q9NRC1 585 aa18.16■□□□□ 0.5
COL7A1-208ENST00000470076 ZMIZ1Q9ULJ6 1067 aa18.16■□□□□ 0.5
COL7A1-208ENST00000470076 TLR6Q9Y2C9 796 aa18.16■□□□□ 0.5
COL7A1-208ENST00000470076 BIN1O00499 593 aa18.15■□□□□ 0.5
COL7A1-208ENST00000470076 CER1O95813 267 aa18.15■□□□□ 0.5
COL7A1-208ENST00000470076 DNTTP04053 509 aa18.15■□□□□ 0.5
COL7A1-208ENST00000470076 FYNP06241 537 aa18.15■□□□□ 0.5
COL7A1-208ENST00000470076 ZNF883P0CG24 379 aa18.15■□□□□ 0.5
COL7A1-208ENST00000470076 KRT5P13647 590 aa18.15■□□□□ 0.5
COL7A1-208ENST00000470076 ACSL1P33121 698 aa18.15■□□□□ 0.5
COL7A1-208ENST00000470076 STX17P56962 302 aa18.15■□□□□ 0.5
COL7A1-208ENST00000470076 RPS14P62263 151 aaKnown RBP18.15■□□□□ 0.5
COL7A1-208ENST00000470076 NADSYN1Q6IA69 706 aa18.15■□□□□ 0.5
COL7A1-208ENST00000470076 CCDC117Q8IWD4 279 aaPredicted RBP18.15■□□□□ 0.5
COL7A1-208ENST00000470076 C1orf216Q8TAB5 229 aa18.15■□□□□ 0.5
COL7A1-208ENST00000470076 STK32AQ8WU08 396 aa18.15■□□□□ 0.5
COL7A1-208ENST00000470076 FAM149B1Q96BN6 582 aa18.15■□□□□ 0.5
COL7A1-208ENST00000470076 FCRL2Q96LA5 508 aaPredicted RBP18.15■□□□□ 0.5
COL7A1-208ENST00000470076 CAMK1GQ96NX5 476 aa18.15■□□□□ 0.5
COL7A1-208ENST00000470076 SRRTQ9BXP5 876 aaKnown RBP18.15■□□□□ 0.5
COL7A1-208ENST00000470076 INTS2Q9H0H0 1204 aaKnown RBP18.15■□□□□ 0.5
COL7A1-208ENST00000470076 STIM2Q9P246 746 aa18.15■□□□□ 0.5
COL7A1-208ENST00000470076 KLK13Q9UKR3 277 aa18.15■□□□□ 0.5
COL7A1-208ENST00000470076 CABIN1Q9Y6J0 2220 aa18.14■□□□□ 0.49
COL7A1-208ENST00000470076 FAM221BA6H8Z2 402 aa18.14■□□□□ 0.49
COL7A1-208ENST00000470076 MED7O43513 233 aa18.14■□□□□ 0.49
COL7A1-208ENST00000470076 FGFR1OPO95684 399 aaKnown RBP18.14■□□□□ 0.49
COL7A1-208ENST00000470076 ASLP04424 464 aa18.14■□□□□ 0.49
COL7A1-208ENST00000470076 MATKP42679 507 aa18.14■□□□□ 0.49
COL7A1-208ENST00000470076 AFF3P51826 1226 aaKnown RBP18.14■□□□□ 0.49
COL7A1-208ENST00000470076 ST8SIA6P61647 398 aa18.14■□□□□ 0.49
COL7A1-208ENST00000470076 TTC31Q49AM3 519 aaPredicted RBP18.14■□□□□ 0.49
COL7A1-208ENST00000470076 TTC17Q96AE7 1141 aa18.14■□□□□ 0.49
COL7A1-208ENST00000470076 SLC39A13Q96H72 371 aa18.14■□□□□ 0.49
COL7A1-208ENST00000470076 LMLNQ96KR4 655 aa18.14■□□□□ 0.49
COL7A1-208ENST00000470076 PRICKLE1Q96MT3 831 aaPredicted RBP18.14■□□□□ 0.49
COL7A1-208ENST00000470076 BTBD1Q9H0C5 482 aa18.14■□□□□ 0.49
COL7A1-208ENST00000470076 C6orf106Q9H6K1 298 aaPredicted RBP18.14■□□□□ 0.49
COL7A1-208ENST00000470076 GAREM1Q9H706 876 aa18.14■□□□□ 0.49
COL7A1-208ENST00000470076 NAALADL1Q9UQQ1 740 aa18.14■□□□□ 0.49
COL7A1-208ENST00000470076 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.14■□□□□ 0.49
COL7A1-208ENST00000470076 DMXL2Q8TDJ6 3036 aa18.14■□□□□ 0.49
COL7A1-208ENST00000470076 WDFY3Q8IZQ1 3526 aa18.13■□□□□ 0.49
COL7A1-208ENST00000470076 CAPN9O14815 690 aa18.13■□□□□ 0.49
COL7A1-208ENST00000470076 SEMA4FO95754 770 aa18.13■□□□□ 0.49
COL7A1-208ENST00000470076 RPS24P62847 133 aaKnown RBP18.13■□□□□ 0.49
COL7A1-208ENST00000470076 CDH18Q13634 790 aa18.13■□□□□ 0.49
COL7A1-208ENST00000470076 MS4A13Q5J8X5 152 aa18.13■□□□□ 0.49
COL7A1-208ENST00000470076 ZNF776Q68DI1 518 aaPredicted RBP18.13■□□□□ 0.49
COL7A1-208ENST00000470076 ENOSF1Q7L5Y1 443 aa18.13■□□□□ 0.49
COL7A1-208ENST00000470076 RAB44Q7Z6P3 723 aaPredicted RBP18.13■□□□□ 0.49
COL7A1-208ENST00000470076 CHCHD4Q8N4Q1 142 aa18.13■□□□□ 0.49
COL7A1-208ENST00000470076 KDM1BQ8NB78 822 aa18.13■□□□□ 0.49
COL7A1-208ENST00000470076 SNX19Q92543 992 aa18.13■□□□□ 0.49
COL7A1-208ENST00000470076 SLC4A5Q9BY07 1137 aa18.13■□□□□ 0.49
COL7A1-208ENST00000470076 RSPH9Q9H1X1 276 aaPredicted RBP18.13■□□□□ 0.49
COL7A1-208ENST00000470076 SGK2Q9HBY8 427 aa18.13■□□□□ 0.49
COL7A1-208ENST00000470076 UBE2TQ9NPD8 197 aaPredicted RBP18.13■□□□□ 0.49
COL7A1-208ENST00000470076 OSGEPQ9NPF4 335 aa18.13■□□□□ 0.49
COL7A1-208ENST00000470076 TM7SF3Q9NS93 570 aa18.13■□□□□ 0.49
COL7A1-208ENST00000470076 SCML1Q9UN30 329 aa18.13■□□□□ 0.49
COL7A1-208ENST00000470076 PKD1L2Q7Z442 2459 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms