RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 MGAT1P26572 445 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 HARS2P49590 506 aaKnown RBP14.03□□□□□ -0.16
BRCA1-209ENST00000470026 BTKQ06187 659 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 UBAP2LQ14157 1087 aaKnown RBP14.03□□□□□ -0.16
BRCA1-209ENST00000470026 RCN2Q14257 317 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 PAFAH1B3Q15102 231 aaKnown RBP14.03□□□□□ -0.16
BRCA1-209ENST00000470026 GRIK4Q16099 956 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 GSTA3Q16772 222 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 EFHC1Q5JVL4 640 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 TMEM154Q6P9G4 183 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 SLC27A1Q6PCB7 646 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 MAVSQ7Z434 540 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 CCDC33Q8N5R6 958 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 UCMAQ8WVF2 138 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 C18orf25Q96B23 403 aaPredicted RBP14.03□□□□□ -0.16
BRCA1-209ENST00000470026 P2RY11Q96G91 374 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 RILPQ96NA2 401 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 SGIP1Q9BQI5 828 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 THTPAQ9BU02 230 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 SLC17A6Q9P2U8 582 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 PPP1R1BQ9UD71 204 aaPredicted RBP14.03□□□□□ -0.16
BRCA1-209ENST00000470026 PSAT1Q9Y617 370 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 H3BRB1 525 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 RNF103O00237 685 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 PPP1R12AO14974 1030 aaPredicted RBP14.03□□□□□ -0.16
BRCA1-209ENST00000470026 FKBP6O75344 327 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 DAB1O75553 588 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 LYPLA1O75608 230 aaPredicted RBP14.03□□□□□ -0.16
BRCA1-209ENST00000470026 LCP1P13796 627 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 MDH1BQ5I0G3 518 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 C6orf163Q5TEZ5 329 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 FASTKD5Q7L8L6 764 aaKnown RBP14.03□□□□□ -0.16
BRCA1-209ENST00000470026 ATP2A3Q93084 1043 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 CLPTM1LQ96KA5 538 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 VCXQ9H320 206 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 TUT1Q9H6E5 874 aaKnown RBP14.03□□□□□ -0.16
BRCA1-209ENST00000470026 TSC2P49815 1807 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 EIF4E1BA6NMX2 242 aaKnown RBP14.02□□□□□ -0.16
BRCA1-209ENST00000470026 XPO1O14980 1071 aaKnown RBP14.02□□□□□ -0.16
BRCA1-209ENST00000470026 CCNT2O60583 730 aaKnown RBP14.02□□□□□ -0.16
BRCA1-209ENST00000470026 STK10O94804 968 aaKnown RBP14.02□□□□□ -0.16
BRCA1-209ENST00000470026 C6orf222P0C671 652 aaPredicted RBP14.02□□□□□ -0.16
BRCA1-209ENST00000470026 ARRB2P32121 409 aa14.02□□□□□ -0.16
BRCA1-209ENST00000470026 GP5P40197 560 aa14.02□□□□□ -0.16
BRCA1-209ENST00000470026 IRX1P78414 480 aaPredicted RBP14.02□□□□□ -0.16
BRCA1-209ENST00000470026 CRADDP78560 199 aa14.02□□□□□ -0.16
BRCA1-209ENST00000470026 PDK1Q15118 436 aa14.02□□□□□ -0.16
BRCA1-209ENST00000470026 SPANXN3Q5MJ09 141 aa14.02□□□□□ -0.16
BRCA1-209ENST00000470026 PGM2L1Q6PCE3 622 aa14.02□□□□□ -0.16
BRCA1-209ENST00000470026 SULF1Q8IWU6 871 aa14.02□□□□□ -0.16
BRCA1-209ENST00000470026 DEFB106AQ8N104 65 aa14.02□□□□□ -0.16
BRCA1-209ENST00000470026 RNF139Q8WU17 664 aa14.02□□□□□ -0.16
BRCA1-209ENST00000470026 APOL6Q9BWW8 343 aa14.02□□□□□ -0.16
BRCA1-209ENST00000470026 EIF2AQ9BY44 585 aaKnown RBP14.02□□□□□ -0.16
BRCA1-209ENST00000470026 ADARB2Q9NS39 739 aaKnown RBP14.02□□□□□ -0.16
BRCA1-209ENST00000470026 COPG2Q9UBF2 871 aa14.02□□□□□ -0.16
BRCA1-209ENST00000470026 ADAM28Q9UKQ2 775 aa14.02□□□□□ -0.16
BRCA1-209ENST00000470026 UBQLN1Q9UMX0 589 aaKnown RBP14.02□□□□□ -0.16
BRCA1-209ENST00000470026 GPR32O75388 356 aa14.02□□□□□ -0.17
BRCA1-209ENST00000470026 ZNF189O75820 626 aaPredicted RBP14.02□□□□□ -0.17
BRCA1-209ENST00000470026 KCNA4P22459 653 aa14.02□□□□□ -0.17
BRCA1-209ENST00000470026 LMO2P25791 158 aa14.02□□□□□ -0.17
BRCA1-209ENST00000470026 ADORA2BP29275 332 aa14.02□□□□□ -0.17
BRCA1-209ENST00000470026 CRABP2P29373 138 aa14.02□□□□□ -0.17
BRCA1-209ENST00000470026 GNL1P36915 607 aaPredicted RBP14.02□□□□□ -0.17
BRCA1-209ENST00000470026 IDH3AP50213 366 aa14.02□□□□□ -0.17
BRCA1-209ENST00000470026 AP2B1P63010 937 aa14.02□□□□□ -0.17
BRCA1-209ENST00000470026 IRX4P78413 519 aa14.02□□□□□ -0.17
BRCA1-209ENST00000470026 DPYSQ14117 519 aa14.02□□□□□ -0.17
BRCA1-209ENST00000470026 PCBP1Q15365 356 aaKnown RBP eCLIP14.02□□□□□ -0.17
BRCA1-209ENST00000470026 XKR4Q5GH76 650 aa14.02□□□□□ -0.17
BRCA1-209ENST00000470026 FBXO47Q5MNV8 452 aa14.02□□□□□ -0.17
BRCA1-209ENST00000470026 GRTP1Q5TC63 336 aa14.02□□□□□ -0.17
BRCA1-209ENST00000470026 CASC4Q6P4E1 433 aa14.02□□□□□ -0.17
BRCA1-209ENST00000470026 FAM131BQ86XD5 332 aa14.02□□□□□ -0.17
BRCA1-209ENST00000470026 C10orf107Q8IVU9 208 aa14.02□□□□□ -0.17
BRCA1-209ENST00000470026 PPP1R14CQ8TAE6 165 aa14.02□□□□□ -0.17
BRCA1-209ENST00000470026 DCPSQ96C86 337 aaKnown RBP14.02□□□□□ -0.17
BRCA1-209ENST00000470026 NR1H4Q96RI1 486 aaPredicted RBP14.02□□□□□ -0.17
BRCA1-209ENST00000470026 NPY6RQ99463 290 aa14.02□□□□□ -0.17
BRCA1-209ENST00000470026 CPNE1Q99829 537 aa14.02□□□□□ -0.17
BRCA1-209ENST00000470026 SYBUQ9NX95 663 aa14.02□□□□□ -0.17
BRCA1-209ENST00000470026 TMEM216Q9P0N5 145 aa14.02□□□□□ -0.17
BRCA1-209ENST00000470026 APOBEC2Q9Y235 224 aaKnown RBP14.02□□□□□ -0.17
BRCA1-209ENST00000470026 DCLK1O15075 740 aa14.01□□□□□ -0.17
BRCA1-209ENST00000470026 SPTLC1O15269 473 aa14.01□□□□□ -0.17
BRCA1-209ENST00000470026 BUD23O43709 281 aaKnown RBP14.01□□□□□ -0.17
BRCA1-209ENST00000470026 SIN3BO75182 1162 aa14.01□□□□□ -0.17
BRCA1-209ENST00000470026 PSMB4P28070 264 aa14.01□□□□□ -0.17
BRCA1-209ENST00000470026 SESN2P58004 480 aaPredicted RBP14.01□□□□□ -0.17
BRCA1-209ENST00000470026 DPY19L2Q6NUT2 758 aa14.01□□□□□ -0.17
BRCA1-209ENST00000470026 ZNF467Q7Z7K2 595 aaPredicted RBP14.01□□□□□ -0.17
BRCA1-209ENST00000470026 ZNF567Q8N184 647 aa14.01□□□□□ -0.17
BRCA1-209ENST00000470026 CERS2Q96G23 380 aa14.01□□□□□ -0.17
BRCA1-209ENST00000470026 TSPAN18Q96SJ8 248 aa14.01□□□□□ -0.17
BRCA1-209ENST00000470026 DLGAP2Q9P1A6 1054 aa14.01□□□□□ -0.17
BRCA1-209ENST00000470026 MYO18AQ92614 2054 aaKnown RBP14.01□□□□□ -0.17
BRCA1-209ENST00000470026 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14□□□□□ -0.17
BRCA1-209ENST00000470026 MAGEA13PA6NCF6 341 aa14□□□□□ -0.17
BRCA1-209ENST00000470026 KPNA7A9QM74 516 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms