RNA–Protein interactions for RNA: ENST00000469403.1

AGRN-205, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 899 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-205ENST00000469403 TMEM25Q86YD3 366 aa27.34■■□□□ 1.97
AGRN-205ENST00000469403 LGI2Q8N0V4 545 aa27.34■■□□□ 1.97
AGRN-205ENST00000469403 TRIM58Q8NG06 486 aa27.34■■□□□ 1.97
AGRN-205ENST00000469403 PRICKLE1Q96MT3 831 aaPredicted RBP27.34■■□□□ 1.97
AGRN-205ENST00000469403 ALS2CR12Q96Q35 445 aa27.34■■□□□ 1.97
AGRN-205ENST00000469403 PPARGC1AQ9UBK2 798 aaKnown RBP27.34■■□□□ 1.97
AGRN-205ENST00000469403 HOXC11O43248 304 aaPredicted RBP27.33■■□□□ 1.97
AGRN-205ENST00000469403 VCPP55072 806 aaKnown RBP27.33■■□□□ 1.97
AGRN-205ENST00000469403 TNK2Q07912 1038 aa27.33■■□□□ 1.97
AGRN-205ENST00000469403 NR1H3Q13133 447 aa27.33■■□□□ 1.97
AGRN-205ENST00000469403 CA9Q16790 459 aa27.33■■□□□ 1.97
AGRN-205ENST00000469403 KCNT1Q5JUK3 1230 aa27.33■■□□□ 1.97
AGRN-205ENST00000469403 RABGAP1LQ5R372 815 aa27.33■■□□□ 1.97
AGRN-205ENST00000469403 TTC39BQ5VTQ0 682 aaPredicted RBP27.33■■□□□ 1.97
AGRN-205ENST00000469403 LRRC31Q6UY01 552 aa27.33■■□□□ 1.97
AGRN-205ENST00000469403 HJURPQ8NCD3 748 aaPredicted RBP27.33■■□□□ 1.97
AGRN-205ENST00000469403 TMA16Q96EY4 203 aaKnown RBP27.33■■□□□ 1.97
AGRN-205ENST00000469403 MAGEB5Q9BZ81 275 aa27.33■■□□□ 1.97
AGRN-205ENST00000469403 DHX35Q9H5Z1 703 aaKnown RBP27.33■■□□□ 1.97
AGRN-205ENST00000469403 RETREG1Q9H6L5 497 aa27.33■■□□□ 1.97
AGRN-205ENST00000469403 CD320Q9NPF0 282 aa27.33■■□□□ 1.97
AGRN-205ENST00000469403 GPATCH2LQ9NWQ4 482 aa27.33■■□□□ 1.97
AGRN-205ENST00000469403 TICRRQ7Z2Z1 1910 aa27.32■■□□□ 1.96
AGRN-205ENST00000469403 OTOL1A6NHN0 477 aaPredicted RBP27.32■■□□□ 1.96
AGRN-205ENST00000469403 E9PAM4 449 aa27.32■■□□□ 1.96
AGRN-205ENST00000469403 FAM72CH0Y354 149 aa27.32■■□□□ 1.96
AGRN-205ENST00000469403 CYBBP04839 570 aa27.32■■□□□ 1.96
AGRN-205ENST00000469403 CTNNA2P26232 953 aa27.32■■□□□ 1.96
AGRN-205ENST00000469403 HOXC13P31276 330 aa27.32■■□□□ 1.96
AGRN-205ENST00000469403 CTNNA1P35221 906 aaKnown RBP27.32■■□□□ 1.96
AGRN-205ENST00000469403 HCAR3P49019 387 aa27.32■■□□□ 1.96
AGRN-205ENST00000469403 ARSEP51690 589 aa27.32■■□□□ 1.96
AGRN-205ENST00000469403 GAD2Q05329 585 aa27.32■■□□□ 1.96
AGRN-205ENST00000469403 SMTNL2Q2TAL5 461 aa27.32■■□□□ 1.96
AGRN-205ENST00000469403 FAM72AQ5TYM5 149 aa27.32■■□□□ 1.96
AGRN-205ENST00000469403 FYB2Q5VWT5 728 aa27.32■■□□□ 1.96
AGRN-205ENST00000469403 FAM72DQ6L9T8 149 aa27.32■■□□□ 1.96
AGRN-205ENST00000469403 PEX26Q7Z412 305 aa27.32■■□□□ 1.96
AGRN-205ENST00000469403 FAM72BQ86X60 149 aa27.32■■□□□ 1.96
AGRN-205ENST00000469403 PYROXD2Q8N2H3 581 aa27.32■■□□□ 1.96
AGRN-205ENST00000469403 MYEOVQ96EZ4 313 aa27.32■■□□□ 1.96
AGRN-205ENST00000469403 EPAS1Q99814 870 aa27.32■■□□□ 1.96
AGRN-205ENST00000469403 STAU2Q9NUL3 570 aaKnown RBP eCLIP27.32■■□□□ 1.96
AGRN-205ENST00000469403 DDX56Q9NY93 547 aaKnown RBP27.32■■□□□ 1.96
AGRN-205ENST00000469403 AMFRQ9UKV5 643 aa27.32■■□□□ 1.96
AGRN-205ENST00000469403 VANGL2Q9ULK5 521 aa27.32■■□□□ 1.96
AGRN-205ENST00000469403 ZKSCAN5Q9Y2L8 839 aa27.32■■□□□ 1.96
AGRN-205ENST00000469403 PCDHA3Q9Y5H8 950 aa27.32■■□□□ 1.96
AGRN-205ENST00000469403 SNX10Q9Y5X0 201 aa27.32■■□□□ 1.96
AGRN-205ENST00000469403 COL4A3Q01955 1670 aa27.32■■□□□ 1.96
AGRN-205ENST00000469403 CCDC66A2RUB6 948 aa27.31■■□□□ 1.96
AGRN-205ENST00000469403 MIF4GDA9UHW6 222 aaKnown RBP27.31■■□□□ 1.96
AGRN-205ENST00000469403 NARSO43776 548 aaKnown RBP27.31■■□□□ 1.96
AGRN-205ENST00000469403 LRIG2O94898 1065 aa27.31■■□□□ 1.96
AGRN-205ENST00000469403 ADH5P11766 374 aa27.31■■□□□ 1.96
AGRN-205ENST00000469403 GGCXP38435 758 aa27.31■■□□□ 1.96
AGRN-205ENST00000469403 GAB4Q2WGN9 574 aa27.31■■□□□ 1.96
AGRN-205ENST00000469403 VSIG1Q86XK7 387 aa27.31■■□□□ 1.96
AGRN-205ENST00000469403 CSGALNACT1Q8TDX6 532 aa27.31■■□□□ 1.96
AGRN-205ENST00000469403 HSPH1Q92598 858 aa27.31■■□□□ 1.96
AGRN-205ENST00000469403 IGSF8Q969P0 613 aa27.31■■□□□ 1.96
AGRN-205ENST00000469403 P2RY11Q96G91 374 aa27.31■■□□□ 1.96
AGRN-205ENST00000469403 KCTD15Q96SI1 283 aaPredicted RBP27.31■■□□□ 1.96
AGRN-205ENST00000469403 GTSE1Q9NYZ3 720 aa27.31■■□□□ 1.96
AGRN-205ENST00000469403 RCOR3Q9P2K3 495 aaPredicted RBP27.31■■□□□ 1.96
AGRN-205ENST00000469403 NEU3Q9UQ49 428 aa27.31■■□□□ 1.96
AGRN-205ENST00000469403 SBDSQ9Y3A5 250 aaKnown RBP eCLIP27.31■■□□□ 1.96
AGRN-205ENST00000469403 DOCK4Q8N1I0 1966 aa27.31■■□□□ 1.96
AGRN-205ENST00000469403 TRDMT1O14717 391 aaKnown RBP27.3■■□□□ 1.96
AGRN-205ENST00000469403 TSPAN3O60637 253 aa27.3■■□□□ 1.96
AGRN-205ENST00000469403 GLULP15104 373 aa27.3■■□□□ 1.96
AGRN-205ENST00000469403 SGSHP51688 502 aa27.3■■□□□ 1.96
AGRN-205ENST00000469403 PDK2Q15119 407 aa27.3■■□□□ 1.96
AGRN-205ENST00000469403 ATP13A4Q4VNC1 1196 aa27.3■■□□□ 1.96
AGRN-205ENST00000469403 TPGS1Q6ZTW0 290 aa27.3■■□□□ 1.96
AGRN-205ENST00000469403 UBALD2Q8IYN6 164 aa27.3■■□□□ 1.96
AGRN-205ENST00000469403 KATNAL2Q8IYT4 538 aa27.3■■□□□ 1.96
AGRN-205ENST00000469403 TSC1Q92574 1164 aa27.3■■□□□ 1.96
AGRN-205ENST00000469403 TBC1D31Q96DN5 1066 aa27.3■■□□□ 1.96
AGRN-205ENST00000469403 RPRD1AQ96P16 312 aaPredicted RBP27.3■■□□□ 1.96
AGRN-205ENST00000469403 BBS2Q9BXC9 721 aa27.3■■□□□ 1.96
AGRN-205ENST00000469403 PCDH18Q9HCL0 1135 aa27.3■■□□□ 1.96
AGRN-205ENST00000469403 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.3■■□□□ 1.96
AGRN-205ENST00000469403 TYW5A2RUC4 315 aaKnown RBP27.29■■□□□ 1.96
AGRN-205ENST00000469403 ZNF487B1APH4 448 aa27.29■■□□□ 1.96
AGRN-205ENST00000469403 CACNG3O60359 315 aa27.29■■□□□ 1.96
AGRN-205ENST00000469403 FTCDO95954 541 aa27.29■■□□□ 1.96
AGRN-205ENST00000469403 HOXD9P28356 352 aaPredicted RBP27.29■■□□□ 1.96
AGRN-205ENST00000469403 RPS24P62847 133 aaKnown RBP27.29■■□□□ 1.96
AGRN-205ENST00000469403 CHST9Q7L1S5 443 aa27.29■■□□□ 1.96
AGRN-205ENST00000469403 DDI1Q8WTU0 396 aa27.29■■□□□ 1.96
AGRN-205ENST00000469403 HES6Q96HZ4 224 aa27.29■■□□□ 1.96
AGRN-205ENST00000469403 SLC2A11Q9BYW1 496 aa27.29■■□□□ 1.96
AGRN-205ENST00000469403 ZYG11BQ9C0D3 744 aa27.29■■□□□ 1.96
AGRN-205ENST00000469403 FBXO10Q9UK96 956 aa27.29■■□□□ 1.96
AGRN-205ENST00000469403 MYOFQ9NZM1 2061 aa27.29■■□□□ 1.96
AGRN-205ENST00000469403 A0A1B0GVM2 712 aa27.28■■□□□ 1.96
AGRN-205ENST00000469403 TCAF2A6NFQ2 919 aa27.28■■□□□ 1.96
AGRN-205ENST00000469403 KIF5CO60282 957 aa27.28■■□□□ 1.96
AGRN-205ENST00000469403 SRGAP2O75044 1071 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms