RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 ZBED1O96006 694 aa13.36□□□□□ -0.27
TRAPPC12-216ENST00000469400 GCLMP48507 274 aa13.36□□□□□ -0.27
TRAPPC12-216ENST00000469400 SGSHP51688 502 aa13.36□□□□□ -0.27
TRAPPC12-216ENST00000469400 TKTL1P51854 596 aa13.36□□□□□ -0.27
TRAPPC12-216ENST00000469400 ZNF445P59923 1031 aa13.36□□□□□ -0.27
TRAPPC12-216ENST00000469400 ADGRF1Q5T601 910 aa13.36□□□□□ -0.27
TRAPPC12-216ENST00000469400 PM20D1Q6GTS8 502 aa13.36□□□□□ -0.27
TRAPPC12-216ENST00000469400 PCSK4Q6UW60 755 aa13.36□□□□□ -0.27
TRAPPC12-216ENST00000469400 BHLHA9Q7RTU4 235 aa13.36□□□□□ -0.27
TRAPPC12-216ENST00000469400 GRAMD1CQ8IYS0 662 aa13.36□□□□□ -0.27
TRAPPC12-216ENST00000469400 UPF2Q9HAU5 1272 aaKnown RBP13.36□□□□□ -0.27
TRAPPC12-216ENST00000469400 AASDHPPTQ9NRN7 309 aa13.36□□□□□ -0.27
TRAPPC12-216ENST00000469400 SFMBT1Q9UHJ3 866 aa13.36□□□□□ -0.27
TRAPPC12-216ENST00000469400 SCML1Q9UN30 329 aa13.36□□□□□ -0.27
TRAPPC12-216ENST00000469400 FRMD4BQ9Y2L6 1034 aa13.36□□□□□ -0.27
TRAPPC12-216ENST00000469400 HBS1LQ9Y450 684 aaKnown RBP13.36□□□□□ -0.27
TRAPPC12-216ENST00000469400 MUC22E2RYF6 1773 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC12-216ENST00000469400 A0A1W2PR77 199 aa13.35□□□□□ -0.27
TRAPPC12-216ENST00000469400 PDXKO00764 312 aa13.35□□□□□ -0.27
TRAPPC12-216ENST00000469400 WNT9AO14904 365 aa13.35□□□□□ -0.27
TRAPPC12-216ENST00000469400 YKT6O15498 198 aa13.35□□□□□ -0.27
TRAPPC12-216ENST00000469400 KLRC4O43908 158 aa13.35□□□□□ -0.27
TRAPPC12-216ENST00000469400 BRINP1O60477 761 aa13.35□□□□□ -0.27
TRAPPC12-216ENST00000469400 POLR2EP19388 210 aaKnown RBP13.35□□□□□ -0.27
TRAPPC12-216ENST00000469400 CD38P28907 300 aa13.35□□□□□ -0.27
TRAPPC12-216ENST00000469400 EPHA8P29322 1005 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC12-216ENST00000469400 CD70P32970 193 aa13.35□□□□□ -0.27
TRAPPC12-216ENST00000469400 VAMP7P51809 220 aa13.35□□□□□ -0.27
TRAPPC12-216ENST00000469400 CFHR1Q03591 330 aa13.35□□□□□ -0.27
TRAPPC12-216ENST00000469400 TLE3Q04726 772 aa13.35□□□□□ -0.27
TRAPPC12-216ENST00000469400 PPP3CAQ08209 521 aa13.35□□□□□ -0.27
TRAPPC12-216ENST00000469400 KCNJ12Q14500 433 aa13.35□□□□□ -0.27
TRAPPC12-216ENST00000469400 WFDC5Q8TCV5 224 aa13.35□□□□□ -0.27
TRAPPC12-216ENST00000469400 MYO19Q96H55 970 aa13.35□□□□□ -0.27
TRAPPC12-216ENST00000469400 TMEM176AQ96HP8 235 aa13.35□□□□□ -0.27
TRAPPC12-216ENST00000469400 ULBP1Q9BZM6 244 aa13.35□□□□□ -0.27
TRAPPC12-216ENST00000469400 NEUROG2Q9H2A3 272 aa13.35□□□□□ -0.27
TRAPPC12-216ENST00000469400 GDF3Q9NR23 364 aa13.35□□□□□ -0.27
TRAPPC12-216ENST00000469400 OLA1Q9NTK5 396 aaKnown RBP13.35□□□□□ -0.27
TRAPPC12-216ENST00000469400 A0A1W2PP55 124 aa13.34□□□□□ -0.27
TRAPPC12-216ENST00000469400 LRRC72A6NJI9 287 aa13.34□□□□□ -0.27
TRAPPC12-216ENST00000469400 C10orf142B7Z368 130 aa13.34□□□□□ -0.27
TRAPPC12-216ENST00000469400 MID1O15344 667 aa13.34□□□□□ -0.27
TRAPPC12-216ENST00000469400 SIN3BO75182 1162 aa13.34□□□□□ -0.27
TRAPPC12-216ENST00000469400 LATS1O95835 1130 aa13.34□□□□□ -0.27
TRAPPC12-216ENST00000469400 SLFN14P0C7P3 912 aa13.34□□□□□ -0.27
TRAPPC12-216ENST00000469400 TRIM49P0CI25 452 aa13.34□□□□□ -0.27
TRAPPC12-216ENST00000469400 TRIM49CP0CI26 452 aa13.34□□□□□ -0.27
TRAPPC12-216ENST00000469400 ARRB1P49407 418 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC12-216ENST00000469400 CXADRP78310 365 aa13.34□□□□□ -0.27
TRAPPC12-216ENST00000469400 CCDC173Q0VFZ6 552 aa13.34□□□□□ -0.27
TRAPPC12-216ENST00000469400 BNIP3Q12983 259 aa13.34□□□□□ -0.27
TRAPPC12-216ENST00000469400 ILKQ13418 452 aa13.34□□□□□ -0.27
TRAPPC12-216ENST00000469400 CST6Q15828 149 aa13.34□□□□□ -0.27
TRAPPC12-216ENST00000469400 ARHGAP17Q68EM7 881 aa13.34□□□□□ -0.27
TRAPPC12-216ENST00000469400 RFWD3Q6PCD5 774 aa13.34□□□□□ -0.27
TRAPPC12-216ENST00000469400 SPACA3Q8IXA5 215 aa13.34□□□□□ -0.27
TRAPPC12-216ENST00000469400 ANKRD52Q8NB46 1076 aa13.34□□□□□ -0.27
TRAPPC12-216ENST00000469400 SLC4A11Q8NBS3 891 aa13.34□□□□□ -0.27
TRAPPC12-216ENST00000469400 OR2T34Q8NGX1 318 aa13.34□□□□□ -0.27
TRAPPC12-216ENST00000469400 RNF139Q8WU17 664 aa13.34□□□□□ -0.27
TRAPPC12-216ENST00000469400 EDEM1Q92611 657 aa13.34□□□□□ -0.27
TRAPPC12-216ENST00000469400 TENM4Q6N022 2769 aa13.34□□□□□ -0.27
TRAPPC12-216ENST00000469400 MGAQ8IWI9 3026 aa13.34□□□□□ -0.27
TRAPPC12-216ENST00000469400 NAV2Q8IVL1 2488 aa13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 CYSRT1A8MQ03 144 aa13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 J3QKU1 62 aa13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 TLR4O00206 839 aa13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 TULP2O00295 520 aa13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 MSI1O43347 362 aaKnown RBP13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 TBL1XO60907 577 aa13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 RNASEH1O60930 286 aaKnown RBP13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 RNASEH2AO75792 299 aaKnown RBP13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 YEATS4O95619 227 aa13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 PDIA4P13667 645 aaKnown RBP13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 CKMT2P17540 419 aa13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 GLDCP23378 1020 aa13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 ACTN2P35609 894 aa13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 CCR5P51681 352 aa13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 RAD23BP54727 409 aa13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 SLC8A3P57103 927 aa13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 NXPH1P58417 271 aa13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 SFSWAPQ12872 951 aaKnown RBP13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 HNRNPA1L2Q32P51 320 aaKnown RBP13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 TBC1D25Q3MII6 688 aa13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 KMT5BQ4FZB7 885 aa13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 MPP7Q5T2T1 576 aa13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 PIK3R6Q5UE93 754 aa13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 SFMBT2Q5VUG0 894 aa13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 BSPRYQ5W0U4 402 aa13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 ERICH1Q86X53 443 aa13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 MMAAQ8IVH4 418 aaKnown RBP13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 DHX40Q8IX18 779 aaKnown RBP13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 CACTIN-AS1Q8N1I8 211 aa13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 CCDC150Q8NCX0 1101 aa13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 RFFLQ8WZ73 363 aa13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 TTC17Q96AE7 1141 aa13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 SERAC1Q96JX3 654 aa13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 LMLNQ96KR4 655 aa13.33□□□□□ -0.28
TRAPPC12-216ENST00000469400 ZNF396Q96N95 335 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms