RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 GRSF1Q12849 480 aaKnown RBP eCLIP5□□□□□ -1.61
SF3B1-207ENST00000468925 IFRD2Q12894 506 aaPredicted RBP5□□□□□ -1.61
SF3B1-207ENST00000468925 PTK6Q13882 451 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 COG2Q14746 738 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 OXA1LQ15070 435 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 TRIP10Q15642 601 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 TRIP13Q15645 432 aaPredicted RBP5□□□□□ -1.61
SF3B1-207ENST00000468925 MAPRE1Q15691 268 aaKnown RBP5□□□□□ -1.61
SF3B1-207ENST00000468925 KCNJ8Q15842 424 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 KLHL38Q2WGJ6 581 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 ANO4Q32M45 955 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 FBLN7Q53RD9 439 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 C2orf27AQ580R0 203 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 DALRD3Q5D0E6 543 aaKnown RBP5□□□□□ -1.61
SF3B1-207ENST00000468925 FAM209AQ5JX71 171 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 OGFOD2Q6N063 350 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 RFWD3Q6PCD5 774 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 SYCE2Q6PIF2 218 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 RHBDF2Q6PJF5 856 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 CCDC137Q6PK04 289 aaKnown RBP5□□□□□ -1.61
SF3B1-207ENST00000468925 C4orf22Q6V702 233 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5□□□□□ -1.61
SF3B1-207ENST00000468925 ZNF574Q6ZN55 896 aaPredicted RBP5□□□□□ -1.61
SF3B1-207ENST00000468925 CCDC81Q6ZN84 652 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 SPATA31D4Q6ZUB0 917 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 OTOAQ7RTW8 1153 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 ADAMTSL2Q86TH1 951 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 GPR180Q86V85 440 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 GPBP1Q86WP2 473 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 MICU3Q86XE3 530 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 NME9Q86XW9 330 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 SRRM1Q8IYB3 904 aaKnown RBP5□□□□□ -1.61
SF3B1-207ENST00000468925 HACE1Q8IYU2 909 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 TTC5Q8N0Z6 440 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 CCDC33Q8N5R6 958 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 CPSF7Q8N684 471 aaKnown RBP5□□□□□ -1.61
SF3B1-207ENST00000468925 TMCO5AQ8N6Q1 288 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 ANKRD13CQ8N6S4 541 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 LSMEM1Q8N8F7 131 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 FANCBQ8NB91 859 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 SIMC1Q8NDZ2 872 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 RIN3Q8TB24 985 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 ACTRT2Q8TDY3 377 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 PHKBQ93100 1093 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 OXNAD1Q96HP4 312 aaPredicted RBP5□□□□□ -1.61
SF3B1-207ENST00000468925 MAGED4Q96JG8 741 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 ZNF347Q96SE7 839 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 UQCC2Q9BRT2 126 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 TSSK1BQ9BXA7 367 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 TRIM9Q9C026 710 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 DCLK3Q9C098 648 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 CEP44Q9C0F1 390 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 MTFR1LQ9H019 292 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 CDH19Q9H159 772 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 BLZF1Q9H2G9 400 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 TRABDQ9H4I3 376 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 ZNF576Q9H609 170 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 MANSC1Q9H8J5 431 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 SP140LQ9H930 580 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 MARCH7Q9H992 704 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 GINM1Q9NU53 330 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 PARVAQ9NVD7 372 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 THAP1Q9NVV9 213 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 TRNAU1APQ9NX07 287 aaKnown RBP5□□□□□ -1.61
SF3B1-207ENST00000468925 ADAMTS1Q9UHI8 967 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 VPS28Q9UK41 221 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 PRPF19Q9UMS4 504 aaKnown RBP5□□□□□ -1.61
SF3B1-207ENST00000468925 NENFQ9UMX5 172 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 PLA2G4CQ9UP65 541 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 ZBTB1Q9Y2K1 713 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 TDRKHQ9Y2W6 561 aaKnown RBP5□□□□□ -1.61
SF3B1-207ENST00000468925 NOSIPQ9Y314 301 aaKnown RBP5□□□□□ -1.61
SF3B1-207ENST00000468925 PCDHA3Q9Y5H8 950 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 ECM29Q5VYK3 1845 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 MN1Q10571 1320 aaPredicted RBP4.99□□□□□ -1.61
SF3B1-207ENST00000468925 MYH11P35749 1972 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 LRP6O75581 1613 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 A0A087X0T9 212 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 LOC105371267A0A1B0GV96 52 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 TRIM49BA6NDI0 452 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 SNTNA6NMZ2 147 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 CAPN14A8MX76 684 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 ALG1L2C9J202 215 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 K7EPI3 171 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 TBX3O15119 743 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 MAGEB3O15480 346 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 SULT1B1O43704 296 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 SCO2O43819 266 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 NUAK1O60285 661 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 DNAJA2O60884 412 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 LRRN2O75325 713 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 GPC4O75487 556 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 GCATO75600 419 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 MTA2O94776 668 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 OR6B1O95007 311 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 PGM3O95394 542 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 ZBTB11O95625 1053 aaPredicted RBP4.99□□□□□ -1.61
SF3B1-207ENST00000468925 ITGB3P05106 788 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 FAM228BP0C875 321 aa4.99□□□□□ -1.61
SF3B1-207ENST00000468925 COL6A1P12109 1028 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms