RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 BMPR1AP36894 532 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 RPL10AP62906 217 aaKnown RBP8.53□□□□□ -1.04
BRCA1-208ENST00000468300 PIK3R6Q5UE93 754 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 KIAA1841Q6NSI8 718 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 EMBQ6PCB8 327 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 MAP7D3Q8IWC1 876 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 CCDC33Q8N5R6 958 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 ZSCAN18Q8TBC5 510 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-208ENST00000468300 SPPL3Q8TCT6 385 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 MYEOVQ96EZ4 313 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 LRRC3Q9BY71 257 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 UBE2OQ9C0C9 1292 aaKnown RBP8.53□□□□□ -1.04
BRCA1-208ENST00000468300 MRPL17Q9NRX2 175 aaKnown RBP8.53□□□□□ -1.04
BRCA1-208ENST00000468300 FAM114A2Q9NRY5 505 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 PCDHB12Q9Y5F1 795 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 IRAK3Q9Y616 596 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 ZNF840PA6NDX5 716 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 LRIG2O94898 1065 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 KRT14P02533 472 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 URODP06132 367 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 VAV1P15498 845 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 HSPA9P38646 679 aaKnown RBP8.53□□□□□ -1.04
BRCA1-208ENST00000468300 TBX4P57082 545 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 EIF3EP60228 445 aaKnown RBP8.53□□□□□ -1.04
BRCA1-208ENST00000468300 NNTQ13423 1086 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 PPP2R5DQ14738 602 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 TOMM20Q15388 145 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 HIBCHQ6NVY1 386 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-208ENST00000468300 C14orf80Q86SX3 495 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 TTC13Q8NBP0 860 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.53□□□□□ -1.04
BRCA1-208ENST00000468300 TRMT2BQ96GJ1 504 aaKnown RBP8.53□□□□□ -1.04
BRCA1-208ENST00000468300 PWWP2AQ96N64 755 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 HAPLN3Q96S86 360 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 PRMT1Q99873 361 aaKnown RBP8.53□□□□□ -1.04
BRCA1-208ENST00000468300 IL21Q9HBE4 155 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 ZNF334Q9HCZ1 680 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-208ENST00000468300 WHRNQ9P202 907 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 OR12D3Q9UGF7 316 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 FARP1Q9Y4F1 1045 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-208ENST00000468300 HS3ST4Q9Y661 456 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 EYSQ5T1H1 3165 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 C5orf42Q9H799 3197 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 BCLAF3A2AJT9 711 aaKnown RBP8.53□□□□□ -1.04
BRCA1-208ENST00000468300 C2orf71A6NGG8 1288 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 TLL1O43897 1013 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 PAGE1O75459 146 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 SPATA31D3P0C874 917 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 CHKAP35790 457 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 CETN2P41208 172 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 TUFMP49411 452 aaKnown RBP8.53□□□□□ -1.04
BRCA1-208ENST00000468300 IRAK1P51617 712 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 ZXDBP98169 803 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 TFDP2Q14188 446 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 EFHC2Q5JST6 749 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 BRMS1LQ5PSV4 323 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 SPATA31D4Q6ZUB0 917 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 TMC3Q7Z5M5 1100 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 ZC3H18Q86VM9 953 aaKnown RBP8.53□□□□□ -1.04
BRCA1-208ENST00000468300 GRK7Q8WTQ7 553 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 P3H4Q92791 437 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 CCDC114Q96M63 670 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 KLHL5Q96PQ7 755 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 TRIM62Q9BVG3 475 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 MUC3BQ9H195 1237 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 CYP4F11Q9HBI6 524 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 ZNF212Q9UDV6 495 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 LZTS1Q9Y250 596 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 INSL5Q9Y5Q6 135 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 CHD5Q8TDI0 1954 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 HELZP42694 1942 aaKnown RBP8.52□□□□□ -1.05
BRCA1-208ENST00000468300 H0YGN5 161 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 ATP8B1O43520 1251 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 PPFIA2O75334 1257 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 ERLIN1O75477 346 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 RBP3P10745 1247 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 ERCC2P18074 760 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 CA8P35219 290 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 RPL22P35268 128 aaKnown RBP8.52□□□□□ -1.05
BRCA1-208ENST00000468300 ITGA8P53708 1063 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 NRG1Q02297 640 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-208ENST00000468300 GAD2Q05329 585 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 TWF1Q12792 350 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 SHHQ15465 462 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 ZSCAN26Q16670 478 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 RNASEH2BQ5TBB1 312 aaKnown RBP8.52□□□□□ -1.05
BRCA1-208ENST00000468300 NADSYN1Q6IA69 706 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 SND1Q7KZF4 910 aaKnown RBP eCLIP8.52□□□□□ -1.05
BRCA1-208ENST00000468300 ARHGAP18Q8N392 663 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 FAM71DQ8N9W8 422 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 CENPOQ9BU64 300 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 MAK16Q9BXY0 300 aaKnown RBP8.52□□□□□ -1.05
BRCA1-208ENST00000468300 RNF38Q9H0F5 515 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 TLR8Q9NR97 1041 aaKnown RBP8.52□□□□□ -1.05
BRCA1-208ENST00000468300 NDFIP2Q9NV92 336 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 MKS1Q9NXB0 559 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 ZNF148Q9UQR1 794 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 HEY1Q9Y5J3 304 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 NFS1Q9Y697 457 aa8.52□□□□□ -1.05
BRCA1-208ENST00000468300 TCRBV7S3A2A0A539 114 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms