RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 MKRN2Q9H000 416 aaKnown RBP19.79■□□□□ 0.76
COL7A1-207ENST00000467985 SLC6A17Q9H1V8 727 aa19.79■□□□□ 0.76
COL7A1-207ENST00000467985 FBRSQ9HAH7 460 aa19.79■□□□□ 0.76
COL7A1-207ENST00000467985 ITM2CQ9NQX7 267 aa19.79■□□□□ 0.76
COL7A1-207ENST00000467985 TMEM74BQ9NUR3 256 aa19.79■□□□□ 0.76
COL7A1-207ENST00000467985 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.79■□□□□ 0.76
COL7A1-207ENST00000467985 C4orf47A7E2U8 309 aa19.78■□□□□ 0.76
COL7A1-207ENST00000467985 MOCS2O96007 188 aaPredicted RBP19.78■□□□□ 0.76
COL7A1-207ENST00000467985 ADRB1P08588 477 aa19.78■□□□□ 0.76
COL7A1-207ENST00000467985 MTA1Q13330 715 aa19.78■□□□□ 0.76
COL7A1-207ENST00000467985 CAMK2GQ13555 558 aaPredicted RBP19.78■□□□□ 0.76
COL7A1-207ENST00000467985 HSP90AA4PQ58FG1 418 aa19.78■□□□□ 0.76
COL7A1-207ENST00000467985 DCAF6Q58WW2 860 aa19.78■□□□□ 0.76
COL7A1-207ENST00000467985 MS4A13Q5J8X5 152 aa19.78■□□□□ 0.76
COL7A1-207ENST00000467985 C11orf57Q6ZUT1 292 aaPredicted RBP19.78■□□□□ 0.76
COL7A1-207ENST00000467985 SLC47A2Q86VL8 602 aa19.78■□□□□ 0.76
COL7A1-207ENST00000467985 PASD1Q8IV76 773 aa19.78■□□□□ 0.76
COL7A1-207ENST00000467985 ATP6V0D2Q8N8Y2 350 aa19.78■□□□□ 0.76
COL7A1-207ENST00000467985 GPT2Q8TD30 523 aa19.78■□□□□ 0.76
COL7A1-207ENST00000467985 ZNF419Q96HQ0 510 aaPredicted RBP19.78■□□□□ 0.76
COL7A1-207ENST00000467985 SLC2A13Q96QE2 648 aa19.78■□□□□ 0.76
COL7A1-207ENST00000467985 TMEM245Q9H330 911 aa19.78■□□□□ 0.76
COL7A1-207ENST00000467985 SYNCQ9H7C4 482 aa19.78■□□□□ 0.76
COL7A1-207ENST00000467985 FAM204AQ9H8W3 233 aa19.78■□□□□ 0.76
COL7A1-207ENST00000467985 STIM2Q9P246 746 aa19.78■□□□□ 0.76
COL7A1-207ENST00000467985 TJP2Q9UDY2 1190 aa19.78■□□□□ 0.76
COL7A1-207ENST00000467985 AJAP1Q9UKB5 411 aaPredicted RBP19.78■□□□□ 0.76
COL7A1-207ENST00000467985 NFE2L3Q9Y4A8 694 aa19.78■□□□□ 0.76
COL7A1-207ENST00000467985 ACACBO00763 2458 aa19.77■□□□□ 0.76
COL7A1-207ENST00000467985 CD70P32970 193 aa19.77■□□□□ 0.76
COL7A1-207ENST00000467985 PI4KAP42356 2102 aa19.77■□□□□ 0.76
COL7A1-207ENST00000467985 COPAP53621 1224 aa19.77■□□□□ 0.76
COL7A1-207ENST00000467985 CDH18Q13634 790 aa19.77■□□□□ 0.76
COL7A1-207ENST00000467985 RAPGEF1Q13905 1077 aa19.77■□□□□ 0.76
COL7A1-207ENST00000467985 ZC3H12AQ5D1E8 599 aaKnown RBP19.77■□□□□ 0.76
COL7A1-207ENST00000467985 WDR45BQ5MNZ6 344 aa19.77■□□□□ 0.76
COL7A1-207ENST00000467985 KLHDC7AQ5VTJ3 777 aa19.77■□□□□ 0.76
COL7A1-207ENST00000467985 ZDHHC17Q8IUH5 632 aa19.77■□□□□ 0.76
COL7A1-207ENST00000467985 C1orf131Q8NDD1 294 aaKnown RBP19.77■□□□□ 0.76
COL7A1-207ENST00000467985 OR2T3Q8NH03 318 aa19.77■□□□□ 0.76
COL7A1-207ENST00000467985 ENOX1Q8TC92 643 aaKnown RBP19.77■□□□□ 0.76
COL7A1-207ENST00000467985 WFDC5Q8TCV5 224 aa19.77■□□□□ 0.76
COL7A1-207ENST00000467985 CYB5D2Q8WUJ1 264 aa19.77■□□□□ 0.76
COL7A1-207ENST00000467985 HSPA12BQ96MM6 686 aa19.77■□□□□ 0.76
COL7A1-207ENST00000467985 PRICKLE1Q96MT3 831 aaPredicted RBP19.77■□□□□ 0.76
COL7A1-207ENST00000467985 NUCKS1Q9H1E3 243 aaKnown RBP19.77■□□□□ 0.76
COL7A1-207ENST00000467985 SAMSN1Q9NSI8 373 aaKnown RBP19.77■□□□□ 0.76
COL7A1-207ENST00000467985 SUSD2Q9UGT4 822 aa19.77■□□□□ 0.76
COL7A1-207ENST00000467985 SLC6A14Q9UN76 642 aa19.77■□□□□ 0.76
COL7A1-207ENST00000467985 KCNU1A8MYU2 1149 aa19.76■□□□□ 0.75
COL7A1-207ENST00000467985 IGLV3-19P01714 112 aa19.76■□□□□ 0.75
COL7A1-207ENST00000467985 ASLP04424 464 aa19.76■□□□□ 0.75
COL7A1-207ENST00000467985 CFIP05156 583 aa19.76■□□□□ 0.75
COL7A1-207ENST00000467985 TPM2P07951 284 aa19.76■□□□□ 0.75
COL7A1-207ENST00000467985 SERPINF2P08697 491 aa19.76■□□□□ 0.75
COL7A1-207ENST00000467985 C7P10643 843 aa19.76■□□□□ 0.75
COL7A1-207ENST00000467985 ABCB4P21439 1286 aa19.76■□□□□ 0.75
COL7A1-207ENST00000467985 CCR1P32246 355 aa19.76■□□□□ 0.75
COL7A1-207ENST00000467985 TPMTP51580 245 aa19.76■□□□□ 0.75
COL7A1-207ENST00000467985 RPS24P62847 133 aaKnown RBP19.76■□□□□ 0.75
COL7A1-207ENST00000467985 GFPT1Q06210 699 aaPredicted RBP19.76■□□□□ 0.75
COL7A1-207ENST00000467985 EIF4EBP2Q13542 120 aaPredicted RBP19.76■□□□□ 0.75
COL7A1-207ENST00000467985 DRAP1Q14919 205 aaPredicted RBP19.76■□□□□ 0.75
COL7A1-207ENST00000467985 TAF5Q15542 800 aa19.76■□□□□ 0.75
COL7A1-207ENST00000467985 PTPRNQ16849 979 aa19.76■□□□□ 0.75
COL7A1-207ENST00000467985 SKOR2Q2VWA4 1001 aaPredicted RBP19.76■□□□□ 0.75
COL7A1-207ENST00000467985 DPY19L2P1Q6NXN4 242 aa19.76■□□□□ 0.75
COL7A1-207ENST00000467985 SLC41A1Q8IVJ1 513 aa19.76■□□□□ 0.75
COL7A1-207ENST00000467985 DEFB106AQ8N104 65 aa19.76■□□□□ 0.75
COL7A1-207ENST00000467985 CARNMT1Q8N4J0 409 aa19.76■□□□□ 0.75
COL7A1-207ENST00000467985 DEFB119Q8N690 84 aa19.76■□□□□ 0.75
COL7A1-207ENST00000467985 TMEM35BQ8NCS4 154 aa19.76■□□□□ 0.75
COL7A1-207ENST00000467985 CADM4Q8NFZ8 388 aa19.76■□□□□ 0.75
COL7A1-207ENST00000467985 TTC17Q96AE7 1141 aa19.76■□□□□ 0.75
COL7A1-207ENST00000467985 TOE1Q96GM8 510 aaKnown RBP19.76■□□□□ 0.75
COL7A1-207ENST00000467985 LMLNQ96KR4 655 aa19.76■□□□□ 0.75
COL7A1-207ENST00000467985 NUP58Q9BVL2 599 aa19.76■□□□□ 0.75
COL7A1-207ENST00000467985 PDCL3Q9H2J4 239 aa19.76■□□□□ 0.75
COL7A1-207ENST00000467985 DDIT4Q9NX09 232 aa19.76■□□□□ 0.75
COL7A1-207ENST00000467985 WSB2Q9NYS7 404 aaPredicted RBP19.76■□□□□ 0.75
COL7A1-207ENST00000467985 SUN2Q9UH99 717 aa19.76■□□□□ 0.75
COL7A1-207ENST00000467985 ATXN2Q99700 1313 aaKnown RBP19.76■□□□□ 0.75
COL7A1-207ENST00000467985 MUC22E2RYF6 1773 aaPredicted RBP19.75■□□□□ 0.75
COL7A1-207ENST00000467985 CDX4O14627 284 aaPredicted RBP19.75■□□□□ 0.75
COL7A1-207ENST00000467985 LUC7L3O95232 432 aaKnown RBP19.75■□□□□ 0.75
COL7A1-207ENST00000467985 MOCS3O95396 460 aa19.75■□□□□ 0.75
COL7A1-207ENST00000467985 HLA-EP13747 358 aa19.75■□□□□ 0.75
COL7A1-207ENST00000467985 UCHL3P15374 230 aa19.75■□□□□ 0.75
COL7A1-207ENST00000467985 GNSP15586 552 aa19.75■□□□□ 0.75
COL7A1-207ENST00000467985 ENGP17813 658 aa19.75■□□□□ 0.75
COL7A1-207ENST00000467985 TACR2P21452 398 aa19.75■□□□□ 0.75
COL7A1-207ENST00000467985 KCNA4P22459 653 aa19.75■□□□□ 0.75
COL7A1-207ENST00000467985 ST8SIA6P61647 398 aa19.75■□□□□ 0.75
COL7A1-207ENST00000467985 SLC6A3Q01959 620 aa19.75■□□□□ 0.75
COL7A1-207ENST00000467985 ZBTB16Q05516 673 aa19.75■□□□□ 0.75
COL7A1-207ENST00000467985 KCNMA1Q12791 1236 aa19.75■□□□□ 0.75
COL7A1-207ENST00000467985 TTC39BQ5VTQ0 682 aaPredicted RBP19.75■□□□□ 0.75
COL7A1-207ENST00000467985 OR6B2Q6IFH4 312 aa19.75■□□□□ 0.75
COL7A1-207ENST00000467985 OLFML1Q6UWY5 402 aa19.75■□□□□ 0.75
COL7A1-207ENST00000467985 RBM43Q6ZSC3 357 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms